Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10003023m.g Citrus clementina HOM05D007769 ORTHO05D009588 1.3e-33 146.0 80 100.0
Atru.chr13.834 Acer truncatum HOM05D007769 ORTHO05D009588 8.2e-25 116.7 72 88.9
Sabra14G0009800 Salix brachista HOM05D007769 ORTHO05D009588 6.9e-24 113.6 74 81.1
Gohir.D01G110800 Gossypium hirsutum HOM05D007769 ORTHO05D009588 9.1e-24 113.2 72 83.3
Sabra02G0093000 Salix brachista HOM05D007769 ORTHO05D009588 1.2e-23 112.8 72 83.3
Potri.014G015866 Populus trichocarpa HOM05D007769 ORTHO05D009588 3.4e-23 111.3 72 81.9
TWI12G0690 Tripterygium wilfordii HOM05D007769 ORTHO05D009588 5.9e-23 110.5 72 83.3
CiPaw.07G174700 Carya illinoinensis HOM05D007769 ORTHO05D009588 1.0e-22 109.8 72 80.6
Duzib093G1544 Durio zibethinus HOM05D007769 ORTHO05D009588 1.3e-22 109.4 72 81.9
Gohir.D05G213500 Gossypium hirsutum HOM05D007769 ORTHO05D009588 1.3e-22 109.4 73 83.6
Gorai.009G220200 Gossypium raimondii HOM05D007769 ORTHO05D009588 1.3e-22 109.4 73 83.6
Potri.002G118366 Populus trichocarpa HOM05D007769 ORTHO05D009588 1.3e-22 109.4 72 81.9
COL.COLO4_28504 Corchorus olitorius HOM05D007769 ORTHO05D009588 2.2e-22 108.6 72 79.2
Manes.05G182100 Manihot esculenta HOM05D007769 ORTHO05D009588 2.2e-22 108.6 72 79.2
THA.LOC104825778 Tarenaya hassleriana HOM05D007769 ORTHO05D009588 2.9e-22 108.2 72 81.9
CARHR277820 Cardamine hirsuta HOM05D007769 ORTHO05D009588 1.1e-21 106.3 72 80.6
unitig_8.g5043 Utricularia gibba HOM05D007769 ORTHO05D009588 1.4e-21 105.9 72 76.4
TWI56G0221 Tripterygium wilfordii HOM05D007769 ORTHO05D009588 3.2e-21 104.8 72 81.9
Aa31LG2G19320 Aethionema arabicum HOM05D007769 ORTHO05D009588 5.5e-21 104.0 72 79.2
A09p08470 Brassica napus HOM05D007769 ORTHO05D009588 7.2e-21 103.6 79 70.9
BraA09t36497Z Brassica rapa HOM05D007769 ORTHO05D009588 7.2e-21 103.6 79 70.9
Carub.0008s2472 Capsella rubella HOM05D007769 ORTHO05D009588 7.2e-21 103.6 72 79.2
Actinidia08247 Actinidia chinensis HOM05D007769 ORTHO05D009588 1.6e-20 102.4 72 79.2
C09p09600 Brassica napus HOM05D007769 ORTHO05D009588 1.6e-20 102.4 79 70.9
BolC9t53870H Brassica oleracea HOM05D007769 ORTHO05D009588 1.6e-20 102.4 79 70.9
CSS0007942 Camellia sinensis var. sinensis HOM05D007769 ORTHO05D009588 1.6e-20 102.4 72 79.2
Actinidia38106 Actinidia chinensis HOM05D007769 ORTHO05D009588 2.7e-20 101.7 72 79.2
Eucgr.F02251 Eucalyptus grandis HOM05D007769 ORTHO05D009588 4.7e-20 100.9 72 77.8
Lj5g0000132 Lotus japonicus HOM05D007769 ORTHO05D009588 3.0e-19 98.2 70 77.1
BcaNung04624 Brassica carinata HOM05D007769 ORTHO05D009588 5.1e-19 97.4 72 73.6
MELO3C010803.2 Cucumis melo HOM05D007769 ORTHO05D009588 5.1e-19 97.4 70 78.6
Gohir.A05G210200 Gossypium hirsutum HOM05D007769 ORTHO05D009588 5.1e-19 97.4 71 76.1
HanXRQChr02g0039171 Helianthus annuus HOM05D007769 ORTHO05D009588 6.7e-19 97.1 73 74.0
PGR031G3105 Punica granatum HOM05D007769 ORTHO05D009588 6.7e-19 97.1 67 77.6
BcaC04g23346 Brassica carinata HOM05D007769 ORTHO05D009588 1.5e-18 95.9 72 73.6
SalBow7G0030 Salvia bowleyana HOM05D007769 ORTHO05D009588 1.5e-18 95.9 72 72.2
Sed0024574 Sechium edule HOM05D007769 ORTHO05D009588 1.5e-18 95.9 70 78.6
Gohir.A01G123201 Gossypium hirsutum HOM05D007769 ORTHO05D009588 2.6e-18 95.1 86 65.1
TPR.G37744 Trifolium pratense HOM05D007769 ORTHO05D009588 3.3e-18 94.7 70 77.1
Gorai.002G135600 Gossypium raimondii HOM05D007769 ORTHO05D009588 4.4e-18 94.4 90 64.4
ClCG08G016510 Citrullus lanatus HOM05D007769 ORTHO05D009588 5.7e-18 94.0 71 76.1
Medtr1g018020 Medicago truncatula HOM05D007769 ORTHO05D009588 5.7e-18 94.0 70 74.3
Ca_13216_v3 Cicer arietinum L. HOM05D007769 ORTHO05D009588 7.4e-18 93.6 70 72.9
Psat6g018200 Pisum sativum HOM05D007769 ORTHO05D009588 7.4e-18 93.6 70 72.9
Sed0002164 Sechium edule HOM05D007769 ORTHO05D009588 1.3e-17 92.8 70 74.3
Lsat_1_v5_gn_4_131941 Lactuca sativa HOM05D007769 ORTHO05D009588 1.7e-17 92.4 73 71.2
QL12p038109 Quercus lobata HOM05D007769 ORTHO05D009588 1.7e-17 92.4 106 56.6
CsaV3_2G026100 Cucumis sativus L. HOM05D007769 ORTHO05D009588 2.2e-17 92.0 72 73.6
SGA_v2.0_scaffold238G43959 Striga asiatica HOM05D007769 ORTHO05D009588 2.8e-17 91.7 74 67.6
AL8G41140 Arabidopsis lyrata HOM05D007769 ORTHO05D009588 3.7e-17 91.3 72 72.2
AT5G63905 Arabidopsis thaliana HOM05D007769 ORTHO05D009588 6.3e-17 90.5 72 69.4
arahy.Tifrunner.gnm1.ann1.3X0B87 Arachis hypogaea HOM05D007769 ORTHO05D009588 1.1e-16 89.7 74 73.0
Glyma.14G089015 Glycine max HOM05D007769 ORTHO05D009588 1.1e-16 89.7 70 75.7
ECA232G2369 Erigeron canadensis HOM05D007769 ORTHO05D009588 1.4e-16 89.4 73 69.9
arahy.Tifrunner.gnm1.ann1.5K9QCS Arachis hypogaea HOM05D007769 ORTHO05D009588 1.8e-16 89.0 74 73.0
Thhalv10005134m.g Eutrema salsugineum HOM05D007769 ORTHO05D009588 4.1e-16 87.8 72 69.4
Glyma.17G234900 Glycine max HOM05D007769 ORTHO05D009588 4.1e-16 87.8 70 74.3
PSO017G3300 Papaver somniferum HOM05D007769 ORTHO05D009588 5.3e-16 87.4 70 70.0
PSO170G4501 Papaver somniferum HOM05D007769 ORTHO05D009588 5.3e-16 87.4 70 70.0
Aqoxy5G00863 Aquilegia oxysepala HOM05D007769 ORTHO05D009588 2.6e-15 85.1 71 70.4
Sp2g26970 Schrenkiella parvula HOM05D007769 ORTHO05D009588 3.5e-15 84.7 72 66.7
Haze_22434 Corylus avellana HOM05D007769 ORTHO05D009588 1.0e-14 83.2 85 57.6
Migut.C00485 Erythranthe guttata HOM05D007769 ORTHO05D009588 1.7e-14 82.4 72 65.3
EL10Ac1g02381 Beta vulgaris HOM05D007769 ORTHO05D009588 2.2e-14 82.0 71 69.0
FAN15G2183 Fragaria x ananassa HOM05D007769 ORTHO05D009588 2.5e-13 78.6 74 62.2
CDE04G0481 Ceratophyllum demersum HOM05D007769 ORTHO05D009588 1.2e-12 76.3 69 69.6
FAN27G1659 Fragaria x ananassa HOM05D007769 ORTHO05D009588 3.6e-12 74.7 72 61.1
Hma1.2p1_0819F.1_g223670 Hydrangea macrophylla HOM05D007769 ORTHO05D009588 8.0e-12 73.6 72 65.3
Nn1g04547 Nelumbo nucifera HOM05D007769 ORTHO05D009588 1.4e-11 72.8 74 62.2
CANSAT78G2421 Cannabis sativa HOM05D007769 ORTHO05D009588 1.8e-11 72.4 70 61.4
Dinv39221 Davidia involucrata HOM05D007769 ORTHO05D009588 3.0e-11 71.6 72 62.5
Rhsim07G0219800 Rhododendron simsii HOM05D007769 ORTHO05D009588 6.7e-11 70.5 87 54.0
FAN20G1609 Fragaria x ananassa HOM05D007769 ORTHO05D009588 1.5e-10 69.3 86 53.5
Lalb_Chr14g0368191 Lupinus albus HOM05D007769 ORTHO05D009588 2.6e-10 68.6 67 59.7
Phvul.001G027800 Phaseolus vulgaris HOM05D007769 ORTHO05D009588 2.6e-10 68.6 70 60.0
Nn5g30603 Nelumbo nucifera HOM05D007769 ORTHO05D009588 4.4e-10 67.8 75 60.0
CANSAT25G3084 Cannabis sativa HOM05D007769 ORTHO05D009588 9.7e-10 66.6 70 58.6
Glyma.06G046700 Glycine max HOM05D015670 ORTHO05D009588 1.4e-08 62.8 71 53.5
HPP92_006078 Vanilla planifolia HOM05D007769 ORTHO05D009588 2.4e-08 62.0 67 61.2
Medtr3g103180 Medicago truncatula HOM05D015670 ORTHO05D009588 5.3e-08 60.8 72 54.2
Phvul.001G027900 Phaseolus vulgaris HOM05D007769 ORTHO05D009588 5.9e-07 57.4 57 63.2
Thecc.08G088600 Theobroma cacao HOM05D007769 ORTHO05D009588 1.3e-06 56.2 35 80.0
Glyma.04G045900 Glycine max HOM05D015670 ORTHO05D009588 1.7e-06 55.8 71 49.3
Peaxi162Scf00003g01523 Petunia axillaris HOM05D007769 ORTHO05D009588 2.9e-06 55.1 36 80.6
TAR376G0843 Trochodendron aralioides HOM05D007769 ORTHO05D009588 2.9e-06 55.1 37 81.1
AagrBONN_evm.TU.Sc2ySwM_344.2823 Anthoceros agrestis HOM05D007769 ORTHO05D009588 8.5e-06 53.5 67 49.3


User provided reference genes

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