Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10002827m.g Citrus clementina HOM05D003336 ORTHO05D003807 2.8e-62 241.9 133 100.0
Ciclev10001634m.g Citrus clementina HOM05D003336 ORTHO05D003807 1.0e-51 206.8 109 92.7
Glyma.19G252200 Glycine max HOM05D003336 ORTHO05D003807 4.2e-50 201.4 109 89.9
THA.LOC104806347 Tarenaya hassleriana HOM05D003336 ORTHO05D003807 7.2e-50 200.7 109 89.0
Lj1g0015608 Lotus japonicus HOM05D003336 ORTHO05D003807 9.4e-50 200.3 109 89.0
Duzib151G0181 Durio zibethinus HOM05D003336 ORTHO05D003807 1.2e-49 199.9 109 89.0
arahy.Tifrunner.gnm1.ann1.4MR6LE Arachis hypogaea HOM05D003336 ORTHO05D003807 1.6e-49 199.5 109 88.1
arahy.Tifrunner.gnm1.ann1.HN7X2L Arachis hypogaea HOM05D003336 ORTHO05D003807 1.6e-49 199.5 109 88.1
Thecc.04G177600 Theobroma cacao HOM05D003336 ORTHO05D003807 1.6e-49 199.5 109 89.0
Psat6g173800 Pisum sativum HOM05D003336 ORTHO05D003807 2.1e-49 199.1 109 89.0
Hma1.2p1_0886F.1_g232710 Hydrangea macrophylla HOM05D003336 ORTHO05D003807 2.7e-49 198.7 109 88.1
Glyma.17G108000 Glycine max HOM05D003336 ORTHO05D003807 6.1e-49 197.6 109 88.1
Gohir.A02G012500 Gossypium hirsutum HOM05D003336 ORTHO05D003807 6.1e-49 197.6 109 88.1
Gohir.D02G013300 Gossypium hirsutum HOM05D003336 ORTHO05D003807 6.1e-49 197.6 109 88.1
Gorai.005G016800 Gossypium raimondii HOM05D003336 ORTHO05D003807 6.1e-49 197.6 109 88.1
Medtr1g090817 Medicago truncatula HOM05D003336 ORTHO05D003807 6.1e-49 197.6 109 88.1
Phvul.006G109300 Phaseolus vulgaris HOM05D003336 ORTHO05D003807 6.1e-49 197.6 109 88.1
QL07p004835 Quercus lobata HOM05D003336 ORTHO05D003807 6.1e-49 197.6 109 87.2
QL10p049056 Quercus lobata HOM05D003336 ORTHO05D003807 6.1e-49 197.6 109 87.2
TPR.G37811 Trifolium pratense HOM05D003336 ORTHO05D003807 6.1e-49 197.6 109 88.1
Aqoxy2G03656 Aquilegia oxysepala HOM05D003336 ORTHO05D003807 7.9e-49 197.2 109 88.1
Lalb_Chr18g0044261 Lupinus albus HOM05D003336 ORTHO05D003807 7.9e-49 197.2 109 88.1
Atru.chr6.1778 Acer truncatum HOM05D003336 ORTHO05D003807 1.0e-48 196.8 109 86.2
MELO3C021601.2 Cucumis melo HOM05D003336 ORTHO05D003807 1.4e-48 196.4 109 87.2
CsaV3_5G026930 Cucumis sativus L. HOM05D003336 ORTHO05D003807 1.4e-48 196.4 109 87.2
Sed0018746 Sechium edule HOM05D003336 ORTHO05D003807 1.4e-48 196.4 109 87.2
SGA_v2.0_scaffold1G00608 Striga asiatica HOM05D003336 ORTHO05D003807 1.4e-48 196.4 109 87.2
arahy.Tifrunner.gnm1.ann1.H7WPER Arachis hypogaea HOM05D003336 ORTHO05D003807 1.8e-48 196.1 109 85.3
ClCG10G008650 Citrullus lanatus HOM05D003336 ORTHO05D003807 1.8e-48 196.1 109 87.2
Eucgr.A00092 Eucalyptus grandis HOM05D003336 ORTHO05D003807 1.8e-48 196.1 109 86.2
Os05g0194600 Oryza sativa ssp. japonica HOM05D003336 ORTHO05D003807 1.8e-48 196.1 109 87.2
VMungo0540G1651 Vigna mungo HOM05D003336 ORTHO05D003807 1.8e-48 196.1 109 87.2
CiPaw.02G054300 Carya illinoinensis HOM05D003336 ORTHO05D003807 2.3e-48 195.7 109 85.3
Eucgr.H01866 Eucalyptus grandis HOM05D003336 ORTHO05D003807 2.3e-48 195.7 109 86.2
MELO3C013276.2 Cucumis melo HOM05D003336 ORTHO05D003807 3.0e-48 195.3 109 86.2
Lsat_1_v5_gn_3_6100 Lactuca sativa HOM05D003336 ORTHO05D003807 3.0e-48 195.3 109 86.2
Manes.04G043500 Manihot esculenta HOM05D003336 ORTHO05D003807 3.0e-48 195.3 109 86.2
ATR0796G111 Amborella trichopoda HOM05D003336 ORTHO05D003807 3.9e-48 194.9 109 86.2
BcaNung01042 Brassica carinata HOM05D003336 ORTHO05D003807 3.9e-48 194.9 109 86.2
A01p13940 Brassica napus HOM05D003336 ORTHO05D003807 3.9e-48 194.9 109 86.2
BraA01t01340Z Brassica rapa HOM05D003336 ORTHO05D003807 3.9e-48 194.9 109 86.2
Sc25g0002520 Simmondsia chinensis HOM05D003336 ORTHO05D003807 3.9e-48 194.9 109 86.2
HPP92_018106 Vanilla planifolia HOM05D003336 ORTHO05D003807 3.9e-48 194.9 109 86.2
CANSAT78G0594 Cannabis sativa HOM05D003336 ORTHO05D003807 5.1e-48 194.5 109 86.2
Prupe.1G196300 Prunus persica HOM05D003336 ORTHO05D003807 5.1e-48 194.5 109 85.3
TWI34G1872 Tripterygium wilfordii HOM05D003336 ORTHO05D003807 5.1e-48 194.5 109 85.3
AT4G22720 Arabidopsis thaliana HOM05D003336 ORTHO05D003807 6.7e-48 194.1 109 85.3
arahy.Tifrunner.gnm1.ann1.UX0YUZ Arachis hypogaea HOM05D003336 ORTHO05D003807 6.7e-48 194.1 109 85.3
CSS0043784 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 6.7e-48 194.1 109 85.3
Eucgr.A00283 Eucalyptus grandis HOM05D003336 ORTHO05D003807 6.7e-48 194.1 109 85.3
MSTRG.9761 Avicennia marina HOM05D003336 ORTHO05D003807 8.8e-48 193.7 109 86.2
FAN10G0305 Fragaria x ananassa HOM05D003336 ORTHO05D003807 8.8e-48 193.7 109 84.4
FAN10G0412 Fragaria x ananassa HOM05D003336 ORTHO05D003807 8.8e-48 193.7 109 84.4
Atru.chr6.1080 Acer truncatum HOM05D003336 ORTHO05D003807 1.1e-47 193.4 109 85.3
Carub.0007s1861 Capsella rubella HOM05D003336 ORTHO05D003807 1.1e-47 193.4 109 84.4
AL7G30880 Arabidopsis lyrata HOM05D003336 ORTHO05D003807 1.5e-47 193.0 109 84.4
EL10Ac3g06008 Beta vulgaris HOM05D003336 ORTHO05D003807 1.5e-47 193.0 109 85.3
CARHR229640 Cardamine hirsuta HOM05D003336 ORTHO05D003807 1.5e-47 193.0 109 84.4
Thhalv10025586m.g Eutrema salsugineum HOM05D003336 ORTHO05D003807 1.5e-47 193.0 109 84.4
Rhsim09G0026500 Rhododendron simsii HOM05D003336 ORTHO05D003807 1.5e-47 193.0 109 85.3
RhsimUnG0196100 Rhododendron simsii HOM05D003336 ORTHO05D003807 1.5e-47 193.0 109 85.3
BcaC09g51096 Brassica carinata HOM05D003336 ORTHO05D003807 2.0e-47 192.6 109 85.3
C01p16980 Brassica napus HOM05D003336 ORTHO05D003807 2.0e-47 192.6 109 85.3
BolC1t01638H Brassica oleracea HOM05D003336 ORTHO05D003807 2.0e-47 192.6 109 85.3
Migut.N03104 Erythranthe guttata HOM05D003336 ORTHO05D003807 2.0e-47 192.6 109 85.3
Migut.O00911 Erythranthe guttata HOM05D003336 ORTHO05D003807 2.6e-47 192.2 109 85.3
FvH4_3g16550 Fragaria vesca HOM05D003336 ORTHO05D003807 2.6e-47 192.2 109 83.5
FAN11G0541 Fragaria x ananassa HOM05D003336 ORTHO05D003807 2.6e-47 192.2 109 83.5
FAN16G2332 Fragaria x ananassa HOM05D003336 ORTHO05D003807 2.6e-47 192.2 109 83.5
FAN25G0065 Fragaria x ananassa HOM05D003336 ORTHO05D003807 2.6e-47 192.2 109 83.5
RcHm_v2.0_Chr1g0331181 Rosa chinensis HOM05D003336 ORTHO05D003807 2.6e-47 192.2 109 83.5
CSS0038565 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 4.4e-47 191.4 109 84.4
Aa31LG6G4680 Aethionema arabicum HOM05D003336 ORTHO05D003807 5.7e-47 191.0 109 84.4
PGR083G1911 Punica granatum HOM05D003336 ORTHO05D003807 5.7e-47 191.0 109 83.5
Zm00001eb283430 Zea mays HOM05D003336 ORTHO05D003807 5.7e-47 191.0 109 83.5
MD17G1219400 Malus domestica HOM05D003336 ORTHO05D003807 7.4e-47 190.7 109 86.2
PSO210G2800 Papaver somniferum HOM05D003336 ORTHO05D003807 7.4e-47 190.7 109 83.5
ECA246G0584 Erigeron canadensis HOM05D003336 ORTHO05D003807 9.7e-47 190.3 109 83.5
Potri.017G029200 Populus trichocarpa HOM05D003336 ORTHO05D003807 9.7e-47 190.3 109 82.6
AUR62011428 Chenopodium quinoa HOM05D003336 ORTHO05D003807 1.3e-46 189.9 109 83.5
AUR62030962 Chenopodium quinoa HOM05D003336 ORTHO05D003807 1.3e-46 189.9 109 83.5
FAN03G2504 Fragaria x ananassa HOM05D003336 ORTHO05D003807 1.3e-46 189.9 109 82.6
FAN21G2317 Fragaria x ananassa HOM05D003336 ORTHO05D003807 1.3e-46 189.9 109 82.6
Oeu061601.1 Olea europaea HOM05D003336 ORTHO05D003807 1.7e-46 189.5 109 85.3
Solyc02g068750.1 Solanum lycopersicum HOM05D003336 ORTHO05D003807 2.8e-46 188.7 109 81.7
PGSC0003DMG400010450 Solanum tuberosum HOM05D003336 ORTHO05D003807 3.7e-46 188.3 109 82.6
AUR62008210 Chenopodium quinoa HOM05D003336 ORTHO05D003807 4.8e-46 188.0 109 81.7
TAR365G0105 Trochodendron aralioides HOM05D003336 ORTHO05D003807 4.8e-46 188.0 109 83.5
FAN06G1925 Fragaria x ananassa HOM05D003336 ORTHO05D003807 6.3e-46 187.6 109 82.6
HanXRQChr17g0533451 Helianthus annuus HOM05D003336 ORTHO05D003807 8.2e-46 187.2 109 81.7
Sopen02g017920 Solanum pennellii HOM05D003336 ORTHO05D003807 8.2e-46 187.2 109 81.7
AUR62003310 Chenopodium quinoa HOM05D003336 ORTHO05D003807 1.1e-45 186.8 109 82.6
Zm00001eb121330 Zea mays HOM05D003336 ORTHO05D003807 1.4e-45 186.4 109 81.7
CAN.G149.29 Capsicum annuum HOM05D003336 ORTHO05D003807 2.4e-45 185.7 109 81.7
Zm00001eb007550 Zea mays HOM05D003336 ORTHO05D003807 4.1e-45 184.9 109 80.7
Zm00001eb059340 Zea mays HOM05D003336 ORTHO05D003807 4.1e-45 184.9 109 80.7
Zm00001eb398700 Zea mays HOM05D003336 ORTHO05D003807 4.1e-45 184.9 109 80.7
Ah.11g051610 Amaranthus hybridus HOM05D003336 ORTHO05D003807 1.2e-44 183.3 109 80.7
CSS0016383 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 7.7e-44 180.6 102 85.3
Atru.chr6.1044 Acer truncatum HOM05D003336 ORTHO05D003807 5.5e-42 174.5 109 79.8
SHI23517 Sapria himalayana HOM05D003336 ORTHO05D003807 1.6e-41 172.9 135 66.7
Mapoly0054s0003 Marchantia polymorpha HOM05D003336 ORTHO05D003807 2.1e-41 172.6 109 76.1
SMO196G0197 Selaginella moellendorffii HOM05D003336 ORTHO05D003807 3.6e-41 171.8 110 75.5
GSVIVG01006062001 Vitis vinifera HOM05D003336 ORTHO05D003807 8.8e-40 167.2 92 87.0
Cpa.g.sc9.295 Carica papaya HOM05D003336 ORTHO05D003807 1.5e-39 166.4 96 85.4
Pp3c8_19600 Physcomitrium patens HOM05D003336 ORTHO05D003807 2.0e-39 166.0 109 71.6
Cc04_g08950 Coffea canephora HOM05D003336 ORTHO05D003807 4.4e-39 164.9 92 85.9
Eucgr.L00050 Eucalyptus grandis HOM05D003336 ORTHO05D003807 4.4e-39 164.9 92 85.9
Zm00001eb376450 Zea mays HOM05D003336 ORTHO05D003807 1.7e-38 162.9 92 83.7
Zm00001eb016890 Zea mays HOM05D003336 ORTHO05D003807 6.3e-38 161.0 92 83.7
Zm00001eb191860 Zea mays HOM05D003336 ORTHO05D003807 6.3e-38 161.0 92 83.7
Zm00001eb336440 Zea mays HOM05D003336 ORTHO05D003807 6.3e-38 161.0 92 83.7
CBR_g36984 Chara braunii HOM05D003336 ORTHO05D003807 1.8e-37 159.5 109 71.6
Zm00001eb324020 Zea mays HOM05D003336 ORTHO05D003807 5.3e-37 157.9 92 82.6
CSS0012442 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 1.6e-36 156.4 104 73.1
Zm00001eb442100 Zea mays HOM05D003336 ORTHO05D003807 5.0e-35 151.4 91 79.1
MCO05G700 Micromonas commoda HOM05D003336 ORTHO05D003807 8.5e-35 150.6 109 64.2
PRCOL_00003655 Prasinoderma coloniale HOM05D003336 ORTHO05D003807 1.4e-32 143.3 109 65.1
C01p17110 Brassica napus HOM05D003336 ORTHO05D003807 2.2e-30 136.0 92 78.3
CSS0000567 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 2.8e-30 135.6 95 72.6
RcHm_v2.0_Chr1g0329821 Rosa chinensis HOM05D003336 ORTHO05D003807 5.3e-29 131.3 97 67.0
CSS0025461 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 2.2e-27 125.9 108 61.1
Cfa023393 Carpinus fangiana HOM05D003336 ORTHO05D003807 2.7e-25 119.0 124 51.6
A08p15940 Brassica napus HOM05D003336 ORTHO05D003807 2.0e-23 112.8 70 78.6
SpUn1040_0020 Schrenkiella parvula HOM05D003336 ORTHO05D003807 3.4e-23 112.1 58 91.4
arahy.Tifrunner.gnm1.ann1.DI9DGG Arachis hypogaea HOM05D003336 ORTHO05D003807 2.2e-22 109.4 58 89.7
BcaC09g51089 Brassica carinata HOM05D003336 ORTHO05D003807 8.3e-22 107.5 59 88.1
C01p17150 Brassica napus HOM05D003336 ORTHO05D003807 8.3e-22 107.5 59 88.1
BolC1t01652H Brassica oleracea HOM05D003336 ORTHO05D003807 8.3e-22 107.5 59 88.1
Aqoxy7G02152 Aquilegia oxysepala HOM05D003336 ORTHO05D003807 3.1e-21 105.5 59 84.7
CSS0001398 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 5.4e-21 104.8 57 86.0
CSS0001716 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 9.1e-21 104.0 83 63.9
CSS0040178 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 1.2e-20 103.6 83 63.9
FAN15G0900 Fragaria x ananassa HOM05D003336 ORTHO05D003807 5.9e-20 101.3 58 81.0
SEGI_39923 Sequoiadendron giganteum HOM05D003336 ORTHO05D003807 5.9e-20 101.3 52 90.4
MBI01_g10302_MAGBIO Magnolia biondii HOM05D003336 ORTHO05D003807 2.9e-19 99.0 79 63.3
C01p17130 Brassica napus HOM05D003336 ORTHO05D003807 5.5e-18 94.7 69 72.5
BolC1t01651H Brassica oleracea HOM05D003336 ORTHO05D003807 5.5e-18 94.7 69 72.5
C01p17060 Brassica napus HOM05D003336 ORTHO05D003807 1.6e-17 93.2 59 79.7
C01p17090 Brassica napus HOM05D003336 ORTHO05D003807 1.6e-17 93.2 59 79.7
BolC1t01646H Brassica oleracea HOM05D003336 ORTHO05D003807 1.6e-17 93.2 59 79.7
BolC1t01648H Brassica oleracea HOM05D003336 ORTHO05D003807 1.6e-17 93.2 59 79.7
CSS0007615 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 6.1e-17 91.3 52 82.7
Nn1g09612 Nelumbo nucifera HOM05D003336 ORTHO05D003807 5.2e-16 88.2 52 80.8
DCAR_026317 Daucus carota HOM05D003336 ORTHO05D003807 8.9e-16 87.4 52 80.8
CSS0023275 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 1.2e-15 87.0 54 75.9
SEGI_08325 Sequoiadendron giganteum HOM05D003336 ORTHO05D003807 1.7e-14 83.2 52 75.0
FAN13G1004 Fragaria x ananassa HOM05D003336 ORTHO05D003807 1.8e-13 79.7 43 83.7
Duzib175G0004 Durio zibethinus HOM05D003336 ORTHO05D003807 1.8e-08 63.2 59 61.0
FvH4_7g04970 Fragaria vesca HOM05D003336 ORTHO05D003807 5.2e-08 61.6 37 81.1
CSS0006022 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 8.9e-08 60.8 43 69.8
Atru.chr7.310 Acer truncatum HOM05D000001 ORTHO05D009429 5.8e-07 58.2 32 84.4
Psat6g173760 Pisum sativum HOM05D003336 ORTHO05D003807 7.5e-07 57.8 52 57.7
FAN17G2067 Fragaria x ananassa HOM05D003336 ORTHO05D003807 6.4e-06 54.7 31 80.6


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