Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10002727m.g Citrus clementina HOM05D007437 ORTHO05D009422 1.4e-76 289.7 164 100.0
GSVIVG01026485001 Vitis vinifera HOM05D007437 ORTHO05D009422 2.0e-57 226.1 165 71.5
CiPaw.04G082500 Carya illinoinensis HOM05D007437 ORTHO05D009422 9.8e-57 223.8 165 69.7
Atru.chr4.895 Acer truncatum HOM05D007437 ORTHO05D009422 3.7e-56 221.9 169 80.5
RcHm_v2.0_Chr2g0120841 Rosa chinensis HOM05D007437 ORTHO05D009422 8.3e-56 220.7 165 69.1
Dinv24359 Davidia involucrata HOM05D007437 ORTHO05D009422 1.8e-55 219.5 164 68.3
QL10p043643 Quercus lobata HOM05D007437 ORTHO05D009422 1.8e-55 219.5 163 67.5
Thecc.01G131700 Theobroma cacao HOM05D007437 ORTHO05D009422 1.8e-55 219.5 163 81.0
COL.COLO4_35739 Corchorus olitorius HOM05D007437 ORTHO05D009422 1.6e-54 216.5 166 74.7
FAN23G1428 Fragaria x ananassa HOM05D007437 ORTHO05D009422 2.7e-54 215.7 164 68.3
FAN23G2875 Fragaria x ananassa HOM05D007437 ORTHO05D009422 2.7e-54 215.7 164 68.3
Haze_25232 Corylus avellana HOM05D007437 ORTHO05D009422 3.5e-54 215.3 155 80.6
FAN26G0277 Fragaria x ananassa HOM05D007437 ORTHO05D009422 4.5e-54 214.9 164 68.3
FvH4_1g24330 Fragaria vesca HOM05D007437 ORTHO05D009422 2.3e-53 212.6 164 67.7
Prupe.6G157800 Prunus persica HOM05D007437 ORTHO05D009422 2.9e-53 212.2 166 69.9
ClCG01G015390 Citrullus lanatus HOM05D007437 ORTHO05D009422 5.0e-53 211.5 161 68.3
TWI31G0094 Tripterygium wilfordii HOM05D007437 ORTHO05D009422 5.0e-53 211.5 163 67.5
FAN19G0121 Fragaria x ananassa HOM05D007437 ORTHO05D009422 8.6e-53 210.7 164 67.1
Sed0017320 Sechium edule HOM05D007437 ORTHO05D009422 1.1e-52 210.3 164 67.1
Gorai.011G119800 Gossypium raimondii HOM05D007437 ORTHO05D009422 5.5e-52 208.0 166 66.9
Nn5g28551 Nelumbo nucifera HOM05D007437 ORTHO05D009422 7.2e-52 207.6 164 65.2
Oeu033664.1 Olea europaea HOM05D007437 ORTHO05D009422 7.2e-52 207.6 165 63.0
PGR119G2133 Punica granatum HOM05D007437 ORTHO05D009422 1.2e-51 206.8 167 67.7
Gohir.D10G109201 Gossypium hirsutum HOM05D007437 ORTHO05D009422 1.6e-51 206.5 166 66.3
Duzib264G1294 Durio zibethinus HOM05D007437 ORTHO05D009422 2.1e-51 206.1 171 74.9
Potri.007G106500 Populus trichocarpa HOM05D007437 ORTHO05D009422 8.0e-51 204.1 161 67.1
MSTRG.23461 Avicennia marina HOM05D007437 ORTHO05D009422 1.0e-50 203.8 169 66.9
Glyma.06G153400 Glycine max HOM05D007437 ORTHO05D009422 1.0e-50 203.8 165 63.0
AUR62003561 Chenopodium quinoa HOM05D007437 ORTHO05D009422 1.4e-50 203.4 165 66.1
Migut.L00964 Erythranthe guttata HOM05D007437 ORTHO05D009422 1.8e-50 203.0 170 64.1
CANSAT01G2130 Cannabis sativa HOM05D007437 ORTHO05D009422 3.0e-50 202.2 164 73.8
AUR62017875 Chenopodium quinoa HOM05D007437 ORTHO05D009422 3.0e-50 202.2 165 65.5
Manes.13G087100 Manihot esculenta HOM05D007437 ORTHO05D009422 3.0e-50 202.2 164 65.9
MELO3C008059.2 Cucumis melo HOM05D007437 ORTHO05D009422 6.8e-50 201.1 154 66.2
QL05p004660 Quercus lobata HOM05D007437 ORTHO05D009422 8.9e-50 200.7 154 66.2
Duzib147G0634 Durio zibethinus HOM05D007437 ORTHO05D009422 1.2e-49 200.3 171 75.4
TAR628G0551 Trochodendron aralioides HOM05D007437 ORTHO05D009422 1.2e-49 200.3 165 68.5
Eucgr.I00205 Eucalyptus grandis HOM05D007437 ORTHO05D009422 2.6e-49 199.1 170 63.5
VMungo1309G0428 Vigna mungo HOM05D007437 ORTHO05D009422 4.4e-49 198.4 164 64.6
Phvul.009G150600 Phaseolus vulgaris HOM05D007437 ORTHO05D009422 7.5e-49 197.6 164 64.0
MBI03_g35294_MAGBIO Magnolia biondii HOM05D007437 ORTHO05D009422 9.8e-49 197.2 164 64.6
CsaV3_6G041610 Cucumis sativus L. HOM05D007437 ORTHO05D009422 2.8e-48 195.7 164 63.4
Gohir.A10G156422 Gossypium hirsutum HOM05D007437 ORTHO05D009422 3.7e-48 195.3 168 66.1
Cc07_g18480 Coffea canephora HOM05D007437 ORTHO05D009422 4.9e-48 194.9 165 63.6
Ca_16946_v3 Cicer arietinum L. HOM05D007437 ORTHO05D009422 1.1e-47 193.7 164 68.9
Ca_16965_v3 Cicer arietinum L. HOM05D007437 ORTHO05D009422 1.1e-47 193.7 164 68.9
Aqoxy5G02234 Aquilegia oxysepala HOM05D007437 ORTHO05D009422 1.8e-47 193.0 167 64.1
BolC6t39926H Brassica oleracea HOM05D007437 ORTHO05D009422 2.4e-47 192.6 167 65.9
THA.LOC104813856 Tarenaya hassleriana HOM05D007437 ORTHO05D009422 4.1e-47 191.8 165 64.2
Carub.0002s2167 Capsella rubella HOM05D007437 ORTHO05D009422 1.2e-46 190.3 167 71.9
A07p40510 Brassica napus HOM05D007437 ORTHO05D009422 1.6e-46 189.9 167 65.3
ECA238G2185 Erigeron canadensis HOM05D007437 ORTHO05D009422 2.0e-46 189.5 99 86.9
Lj1g0016732 Lotus japonicus HOM05D007437 ORTHO05D009422 2.0e-46 189.5 164 67.1
HanXRQChr14g0433361 Helianthus annuus HOM05D007437 ORTHO05D009422 2.7e-46 189.1 92 93.5
SalBow6G6692 Salvia bowleyana HOM05D007437 ORTHO05D009422 2.7e-46 189.1 93 92.5
Hma1.2p1_0050F.1_g029150 Hydrangea macrophylla HOM05D007437 ORTHO05D009422 5.9e-46 188.0 93 91.4
Lsat_1_v5_gn_2_37340 Lactuca sativa HOM05D007437 ORTHO05D009422 5.9e-46 188.0 94 89.4
Nitab4.5_0008132g0030 Nicotiana tabacum HOM05D007437 ORTHO05D009422 7.8e-46 187.6 99 86.9
AT1G74880 Arabidopsis thaliana HOM05D007437 ORTHO05D009422 1.0e-45 187.2 167 64.7
Lalb_Chr11g0068441 Lupinus albus HOM05D007437 ORTHO05D009422 1.0e-45 187.2 164 59.1
Medtr3g096290 Medicago truncatula HOM05D007437 ORTHO05D009422 1.3e-45 186.8 98 89.8
Solyc11g006020.2 Solanum lycopersicum HOM05D007437 ORTHO05D009422 1.3e-45 186.8 164 70.1
AL2G34760 Arabidopsis lyrata HOM05D007437 ORTHO05D009422 2.3e-45 186.0 167 64.1
Aa31LG4G5100 Aethionema arabicum HOM05D007437 ORTHO05D009422 3.8e-45 185.3 92 92.4
ATR1136G110 Amborella trichopoda HOM05D007437 ORTHO05D009422 3.8e-45 185.3 105 83.8
PSO017G4908 Papaver somniferum HOM05D007437 ORTHO05D009422 5.0e-45 184.9 174 59.8
Nitab4.5_0000856g0100 Nicotiana tabacum HOM05D007437 ORTHO05D009422 6.6e-45 184.5 166 60.8
CAN.G582.8 Capsicum annuum HOM05D007437 ORTHO05D009422 8.6e-45 184.1 93 89.2
Thhalv10019178m.g Eutrema salsugineum HOM05D007437 ORTHO05D009422 1.1e-44 183.7 166 72.3
Psat5g062800 Pisum sativum HOM05D007437 ORTHO05D009422 1.1e-44 183.7 99 87.9
C06p48900 Brassica napus HOM05D007437 ORTHO05D009422 1.9e-44 183.0 165 71.5
CSS0043391 Camellia sinensis var. sinensis HOM05D007437 ORTHO05D009422 1.9e-44 183.0 179 62.0
Actinidia20077 Actinidia chinensis HOM05D007437 ORTHO05D009422 2.5e-44 182.6 160 63.8
Rhsim10G0134900 Rhododendron simsii HOM05D007437 ORTHO05D009422 2.5e-44 182.6 170 68.2
unitig_699.g19721 Utricularia gibba HOM05D007437 ORTHO05D009422 3.3e-44 182.2 158 59.5
SEGI_02322 Sequoiadendron giganteum HOM05D007437 ORTHO05D009422 8.0e-43 177.6 100 84.0
CARHR068200 Cardamine hirsuta HOM05D007437 ORTHO05D009422 1.0e-42 177.2 162 62.3
BraA07t31596Z Brassica rapa HOM05D007437 ORTHO05D009422 1.4e-42 176.8 161 63.4
PSO170G6470 Papaver somniferum HOM05D007437 ORTHO05D009422 1.8e-42 176.4 166 59.0
Migut.L00881 Erythranthe guttata HOM05D007437 ORTHO05D009422 8.9e-42 174.1 86 90.7
arahy.Tifrunner.gnm1.ann1.1RKJ3P Arachis hypogaea HOM05D007437 ORTHO05D009422 1.5e-41 173.3 84 94.0
Sopen11g001960 Solanum pennellii HOM05D007437 ORTHO05D009422 3.4e-41 172.2 186 61.3
AagrBONN_evm.TU.Sc2ySwM_344.3842 Anthoceros agrestis HOM05D007437 ORTHO05D009422 5.8e-41 171.4 99 77.8
MD01G1003600 Malus domestica HOM05D007437 ORTHO05D009422 1.3e-40 170.2 152 63.8
Os01g0959900 Oryza sativa ssp. japonica HOM05D007437 ORTHO05D009422 1.1e-39 167.2 86 88.4
TPR.G28241 Trifolium pratense HOM05D007437 ORTHO05D009422 3.2e-39 165.6 83 91.6
DCAR_014338 Daucus carota HOM05D007437 ORTHO05D009422 7.0e-39 164.5 151 66.2
Cpa.g.sc42.157 Carica papaya HOM05D007437 ORTHO05D009422 9.2e-39 164.1 181 58.0
vmacro12802 Vaccinium macrocarpon HOM05D007437 ORTHO05D009422 6.6e-37 157.9 77 92.2
Zm00001eb362560 Zea mays HOM05D007437 ORTHO05D009422 8.6e-37 157.5 80 90.0
EL10Ac6g15309 Beta vulgaris HOM05D007437 ORTHO05D009422 3.3e-36 155.6 165 55.8
SMO367G0120 Selaginella moellendorffii HOM05D000331 ORTHO05D002018 2.8e-35 152.5 80 86.2
Peaxi162Scf00183g00218 Petunia axillaris HOM05D007437 ORTHO05D009422 1.1e-34 150.6 168 54.2
Mapoly0090s0072 Marchantia polymorpha HOM05D007437 ORTHO05D009422 5.2e-34 148.3 87 73.6
Pp3c1_14760 Physcomitrium patens HOM05D007437 ORTHO05D009422 6.8e-34 147.9 101 65.3
SMO367G1275 Selaginella moellendorffii HOM05D007437 ORTHO05D009422 6.8e-34 147.9 75 88.0
CDE08G0468 Ceratophyllum demersum HOM05D005037 ORTHO05D006274 4.4e-33 145.2 77 87.0
Sp5g30020 Schrenkiella parvula HOM05D007437 ORTHO05D009422 6.4e-32 141.4 79 81.0
BcaC08g46922 Brassica carinata HOM05D007437 ORTHO05D009422 2.7e-30 136.0 142 59.2
QL05p004576 Quercus lobata HOM05D007437 ORTHO05D009422 3.5e-30 135.6 68 86.8
CBR_g29941 Chara braunii HOM05D007437 ORTHO05D009422 1.9e-28 129.8 88 68.2
CDE02G1359 Ceratophyllum demersum HOM05D007437 ORTHO05D009422 2.1e-22 109.8 122 54.9
arahy.Tifrunner.gnm1.ann1.E1UNHC Arachis hypogaea HOM05D007437 ORTHO05D009422 6.6e-21 104.8 49 98.0


User provided reference genes

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