Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10002679m.g Citrus clementina HOM05D007523 ORTHO05D009520 1.9e-82 309.3 172 100.0
Atru.chr6.1496 Acer truncatum HOM05D007523 ORTHO05D009520 4.8e-54 214.9 169 75.1
Haze_08076 Corylus avellana HOM05D007523 ORTHO05D009520 9.0e-45 184.1 173 70.5
Potri.001G132400 Populus trichocarpa HOM05D007523 ORTHO05D009520 9.0e-45 184.1 178 65.7
CSS0003197 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 2.0e-44 183.0 174 66.1
CSS0001694 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 5.8e-44 181.4 172 65.7
QL12p000900 Quercus lobata HOM05D007523 ORTHO05D009520 5.8e-44 181.4 175 63.4
GSVIVG01026296001 Vitis vinifera HOM05D007523 ORTHO05D009520 4.9e-43 178.3 176 63.6
Sabra01G0102200 Salix brachista HOM05D007523 ORTHO05D009520 1.9e-42 176.4 175 64.6
Dinv28021 Davidia involucrata HOM05D007523 ORTHO05D009520 3.5e-41 172.2 164 66.5
TAR629G3055 Trochodendron aralioides HOM05D007523 ORTHO05D009520 1.3e-40 170.2 178 61.8
CiPaw.11G102500 Carya illinoinensis HOM05D007523 ORTHO05D009520 3.9e-40 168.7 177 63.3
Manes.17G008000 Manihot esculenta HOM05D007523 ORTHO05D009520 1.5e-39 166.8 178 60.7
Prupe.5G021500 Prunus persica HOM05D007523 ORTHO05D009520 2.0e-36 156.4 173 61.8
MD06G1014600 Malus domestica HOM05D007523 ORTHO05D009520 3.4e-36 155.6 180 59.4
Nn1g02124 Nelumbo nucifera HOM05D007523 ORTHO05D009520 3.8e-35 152.1 142 67.6
Thecc.02G365300 Theobroma cacao HOM05D007523 ORTHO05D009520 4.9e-35 151.8 176 59.1
TWI34G1559 Tripterygium wilfordii HOM05D007523 ORTHO05D009520 4.9e-35 151.8 178 57.9
vmacro00070 Vaccinium macrocarpon HOM05D007523 ORTHO05D009520 1.4e-34 150.2 174 53.4
Oeu017333.1 Olea europaea HOM05D007523 ORTHO05D009520 1.9e-34 149.8 176 56.2
Lalb_Chr16g0392051 Lupinus albus HOM05D007523 ORTHO05D009520 3.5e-33 145.6 144 63.2
PSO675G0851 Papaver somniferum HOM05D007523 ORTHO05D009520 1.3e-32 143.7 160 58.8
Aqoxy4G00046 Aquilegia oxysepala HOM05D007523 ORTHO05D009520 2.3e-32 142.9 168 57.1
CANSAT21G1314 Cannabis sativa HOM05D007523 ORTHO05D009520 3.0e-32 142.5 164 60.4
Cc08_g04400 Coffea canephora HOM05D007523 ORTHO05D009520 3.0e-32 142.5 177 50.8
Rhsim11G0026000 Rhododendron simsii HOM05D007523 ORTHO05D009520 3.9e-32 142.1 150 58.7
PSO675G0835 Papaver somniferum HOM05D007523 ORTHO05D009520 6.7e-32 141.4 129 67.4
Duzib248G0934 Durio zibethinus HOM05D007523 ORTHO05D009520 8.7e-32 141.0 176 56.2
Nn3g19239 Nelumbo nucifera HOM05D007523 ORTHO05D009520 1.1e-31 140.6 179 54.7
ClCG07G002350 Citrullus lanatus HOM05D007523 ORTHO05D009520 1.5e-31 140.2 174 56.9
Lj4g0001215 Lotus japonicus HOM05D007523 ORTHO05D009520 3.3e-31 139.0 154 60.4
Aa31LG6G1770 Aethionema arabicum HOM05D007523 ORTHO05D005023 4.3e-31 138.7 170 53.5
AL7G35030 Arabidopsis lyrata HOM05D007523 ORTHO05D009520 7.4e-31 137.9 144 59.0
THA.LOC104811020 Tarenaya hassleriana HOM05D007523 ORTHO05D009520 7.4e-31 137.9 168 56.0
CARHR225970 Cardamine hirsuta HOM05D007523 ORTHO05D009520 1.3e-30 137.1 172 54.7
Thhalv10026426m.g Eutrema salsugineum HOM05D007523 ORTHO05D009520 1.3e-30 137.1 158 56.3
RcHm_v2.0_Chr7g0213271 Rosa chinensis HOM05D007523 ORTHO05D009520 3.7e-30 135.6 178 56.2
AT4G19070 Arabidopsis thaliana HOM05D007523 ORTHO05D009520 4.8e-30 135.2 138 59.4
Carub.0007s2207 Capsella rubella HOM05D007523 ORTHO05D009520 4.8e-30 135.2 171 53.2
Gohir.A12G173966 Gossypium hirsutum HOM05D007523 ORTHO05D009520 8.2e-30 134.4 172 55.8
Psat4g110520 Pisum sativum HOM05D007523 ORTHO05D009520 1.1e-29 134.0 171 56.7
C07p50210 Brassica napus HOM05D000137 ORTHO05D002305 1.4e-29 133.7 138 59.4
Gorai.008G189000 Gossypium raimondii HOM05D007523 ORTHO05D009520 1.8e-29 133.3 172 55.2
Migut.E01344 Erythranthe guttata HOM05D007523 ORTHO05D009520 2.4e-29 132.9 165 52.7
Sp7g17790 Schrenkiella parvula HOM05D007523 ORTHO05D005023 2.4e-29 132.9 145 57.2
Sc22g0001970 Simmondsia chinensis HOM05D007523 ORTHO05D009520 2.4e-29 132.9 177 53.1
BcaNung03083 Brassica carinata HOM05D007523 ORTHO05D009520 3.1e-29 132.5 139 60.4
BraA03t14258Z Brassica rapa HOM05D000452 ORTHO05D000647 3.1e-29 132.5 139 60.4
CsaV3_3G030330 Cucumis sativus L. HOM05D007523 ORTHO05D009520 4.1e-29 132.1 173 54.9
BolC7t45523H Brassica oleracea HOM05D007523 ORTHO05D009520 5.3e-29 131.7 139 60.4
A03p51710 Brassica napus HOM05D000137 ORTHO05D002305 9.0e-29 131.0 129 62.0
Gohir.D12G176600 Gossypium hirsutum HOM05D007523 ORTHO05D009520 1.2e-28 130.6 172 54.7
ATR1098G100 Amborella trichopoda HOM05D007523 ORTHO05D009520 1.5e-28 130.2 176 54.5
MSTRG.1775 Avicennia marina HOM05D007523 ORTHO05D009520 1.5e-28 130.2 177 52.5
Eucgr.D02602 Eucalyptus grandis HOM05D007523 ORTHO05D009520 2.6e-28 129.4 174 52.9
Medtr8g071180 Medicago truncatula HOM05D007523 ORTHO05D009520 3.4e-28 129.0 176 53.4
FAN04G1224 Fragaria x ananassa HOM05D007523 ORTHO05D009520 4.5e-28 128.6 154 59.7
Actinidia04633 Actinidia chinensis HOM05D007523 ORTHO05D009520 5.9e-28 128.3 178 48.3
HanXRQChr03g0082201 Helianthus annuus HOM05D007523 ORTHO05D009520 7.6e-28 127.9 136 63.2
TPR.G31317 Trifolium pratense HOM05D007523 ORTHO05D009520 2.2e-27 126.3 176 52.8
SalBow8G2402 Salvia bowleyana HOM05D007523 ORTHO05D009520 2.9e-27 125.9 137 60.6
BcaC06g30615 Brassica carinata HOM05D007523 ORTHO05D009520 3.8e-27 125.6 140 60.0
Sed0002333 Sechium edule HOM05D007523 ORTHO05D009520 3.8e-27 125.6 175 53.7
Glyma.16G104300 Glycine max HOM05D007523 ORTHO05D009520 5.0e-27 125.2 170 51.8
arahy.Tifrunner.gnm1.ann1.7DC73F Arachis hypogaea HOM05D007523 ORTHO05D009520 1.1e-26 124.0 145 58.6
Ca_22486_v3 Cicer arietinum L. HOM05D007523 ORTHO05D009520 1.1e-26 124.0 176 52.3
FvH4_5g23880 Fragaria vesca HOM05D007523 ORTHO05D009520 1.1e-26 124.0 170 54.7
FAN18G0623 Fragaria x ananassa HOM05D007523 ORTHO05D009520 1.1e-26 124.0 170 54.7
FAN18G3486 Fragaria x ananassa HOM05D007523 ORTHO05D009520 1.1e-26 124.0 170 54.7
arahy.Tifrunner.gnm1.ann1.19GUIE Arachis hypogaea HOM05D007523 ORTHO05D009520 1.4e-26 123.6 145 57.9
PGR031G0795 Punica granatum HOM05D007523 ORTHO05D009520 1.4e-26 123.6 156 56.4
Peaxi162Scf00876g00434 Petunia axillaris HOM05D007523 ORTHO05D009520 3.2e-26 122.5 150 55.3
ECA240G1522 Erigeron canadensis HOM05D007523 ORTHO05D009520 4.2e-26 122.1 136 61.8
Migut.A00547 Erythranthe guttata HOM05D007523 ORTHO05D009520 5.5e-26 121.7 152 52.0
Phvul.003G279400 Phaseolus vulgaris HOM05D007523 ORTHO05D009520 9.3e-26 120.9 171 50.9
SGA_v2.0_scaffold96G29060 Striga asiatica HOM05D007523 ORTHO05D009520 9.3e-26 120.9 129 59.7
MBI18_g28211_MAGBIO Magnolia biondii HOM05D007523 ORTHO05D009520 6.1e-25 118.2 164 53.7
Cpa.g.sc355.1 Carica papaya HOM05D007523 ORTHO05D009520 6.7e-24 114.8 110 72.7
VMungo0251G0133 Vigna mungo HOM05D007523 ORTHO05D009520 6.7e-24 114.8 154 52.6
Solyc12g096090.2 Solanum lycopersicum HOM05D007523 ORTHO05D009520 1.1e-23 114.0 181 48.1
Ah.12g055890 Amaranthus hybridus HOM05D002287 ORTHO05D002588 1.5e-23 113.6 151 55.0
CDE05G0732 Ceratophyllum demersum HOM05D007523 ORTHO05D009520 3.3e-23 112.5 125 62.4
Sopen12g031980 Solanum pennellii HOM05D007523 ORTHO05D009520 4.3e-23 112.1 176 47.7
Nitab4.5_0006741g0030 Nicotiana tabacum HOM05D007523 ORTHO05D009520 1.7e-22 110.2 167 47.9
Nitab4.5_0000943g0130 Nicotiana tabacum HOM05D007523 ORTHO05D009520 4.8e-22 108.6 169 47.3
EL10Ac5g11951 Beta vulgaris HOM05D007523 ORTHO05D009520 8.2e-22 107.8 87 81.6
CAN.G947.41 Capsicum annuum HOM05D007523 ORTHO05D009520 8.2e-22 107.8 178 46.1
PGSC0003DMG400029292 Solanum tuberosum HOM05D007523 ORTHO05D009520 8.2e-22 107.8 153 50.3
AUR62027336 Chenopodium quinoa HOM05D007523 ORTHO05D009520 3.4e-20 102.4 92 78.3
unitig_0.g2217 Utricularia gibba HOM05D007523 ORTHO05D009520 5.0e-19 98.6 107 64.5
AUR62007395 Chenopodium quinoa HOM05D002287 ORTHO05D009520 1.1e-18 97.4 99 68.7
SalBow4G0950 Salvia bowleyana HOM05D007523 ORTHO05D009520 1.1e-18 97.4 78 75.6
HPP92_012195 Vanilla planifolia HOM05D007523 ORTHO05D009520 1.2e-17 94.0 121 57.9
Os07g0143600 Oryza sativa ssp. japonica HOM05D007523 ORTHO05D009520 7.9e-17 91.3 145 49.0
Mapoly0024s0063 Marchantia polymorpha HOM05D007523 ORTHO05D009520 6.7e-16 88.2 97 61.9
COL.COLO4_11248 Corchorus olitorius HOM05D007523 ORTHO05D009520 8.8e-16 87.8 148 50.0
Peaxi162Scf00972g00043 Petunia axillaris HOM05D007523 ORTHO05D009520 1.5e-15 87.0 150 48.0
AagrBONN_evm.TU.Sc2ySwM_368.2556 Anthoceros agrestis HOM05D007523 ORTHO05D009520 3.3e-15 85.9 120 47.5
Mapoly0010s0014 Marchantia polymorpha HOM05D007523 ORTHO05D009520 9.7e-15 84.3 171 42.1
MSTRG.11889 Avicennia marina HOM05D007523 ORTHO05D009520 3.1e-13 79.3 83 68.7
Pp3c19_7810 Physcomitrium patens HOM05D007523 ORTHO05D009520 6.9e-13 78.2 140 40.0
SMO353G0121 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 1.1e-10 70.9 110 50.0
SMO364G0280 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 9.4e-10 67.8 78 62.8
AUR62044264 Chenopodium quinoa HOM05D007523 ORTHO05D009520 9.7e-07 57.8 72 73.6


User provided reference genes

Program Settings