Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10002484m.g Citrus clementina HOM05D007279 ORTHO05D009212 5.8e-102 374.4 211 100.0
Atru.chr13.1590 Acer truncatum HOM05D007279 ORTHO05D009212 7.6e-78 294.3 210 71.4
Duzib093G1369 Durio zibethinus HOM05D007279 ORTHO05D009212 3.8e-77 292.0 209 70.8
Manes.02G169000 Manihot esculenta HOM05D007279 ORTHO05D009212 8.4e-77 290.8 201 70.6
Potri.005G183000 Populus trichocarpa HOM05D007279 ORTHO05D009212 1.6e-75 286.6 201 72.6
Gohir.D03G063100 Gossypium hirsutum HOM05D007279 ORTHO05D009212 2.7e-75 285.8 202 74.8
Gorai.013G108300 Gossypium raimondii HOM05D007279 ORTHO05D009212 2.7e-75 285.8 202 74.8
TWI34G0215 Tripterygium wilfordii HOM05D007279 ORTHO05D009212 3.5e-75 285.4 209 69.4
Gohir.A02G110900 Gossypium hirsutum HOM05D007279 ORTHO05D009212 4.6e-75 285.0 202 74.3
Prupe.1G488900 Prunus persica HOM05D007279 ORTHO05D009212 1.0e-74 283.9 211 68.7
GSVIVG01008801001 Vitis vinifera HOM05D007279 ORTHO05D009212 1.7e-74 283.1 201 77.1
CiPaw.16G022500 Carya illinoinensis HOM05D007279 ORTHO05D009212 3.0e-74 282.3 207 76.3
Cfa018422 Carpinus fangiana HOM05D007279 ORTHO05D009212 6.6e-74 281.2 207 70.0
COL.COLO4_33390 Corchorus olitorius HOM05D007279 ORTHO05D009212 1.1e-73 280.4 210 68.6
Dinv27265 Davidia involucrata HOM05D007279 ORTHO05D009212 1.5e-73 280.0 213 69.0
PGR044G1698 Punica granatum HOM05D007279 ORTHO05D009212 1.5e-73 280.0 215 70.7
MD15G1133300 Malus domestica HOM05D007279 ORTHO05D009212 1.9e-73 279.6 202 69.3
Sabra05G0138700 Salix brachista HOM05D007279 ORTHO05D009212 1.9e-73 279.6 211 72.0
CSS0035764 Camellia sinensis var. sinensis HOM05D007279 ORTHO05D009212 1.3e-72 276.9 217 67.3
RcHm_v2.0_Chr6g0296781 Rosa chinensis HOM05D007279 ORTHO05D009212 6.2e-72 274.6 210 67.1
Peaxi162Scf00066g00422 Petunia axillaris HOM05D007279 ORTHO05D009212 1.8e-71 273.1 213 69.0
FvH4_2g27960 Fragaria vesca HOM05D007279 ORTHO05D009212 5.3e-71 271.6 209 67.0
FAN27G1298 Fragaria x ananassa HOM05D007279 ORTHO05D009212 6.9e-71 271.2 209 67.0
Lalb_Chr08g0241031 Lupinus albus HOM05D007279 ORTHO05D009212 1.2e-70 270.4 216 65.3
Eucgr.F03852 Eucalyptus grandis HOM05D007279 ORTHO05D009212 2.6e-70 269.2 210 71.9
FAN24G0438 Fragaria x ananassa HOM05D007279 ORTHO05D009212 2.6e-70 269.2 209 66.5
Glyma.04G245200 Glycine max HOM05D007279 ORTHO05D009212 2.6e-70 269.2 216 66.7
TAR628G0029 Trochodendron aralioides HOM05D007279 ORTHO05D009212 3.4e-70 268.9 208 71.6
FAN20G2640 Fragaria x ananassa HOM05D007279 ORTHO05D009212 5.8e-70 268.1 209 67.0
Glyma.06G118000 Glycine max HOM05D007279 ORTHO05D009212 5.8e-70 268.1 217 65.4
MSTRG.1407 Avicennia marina HOM05D007279 ORTHO05D009212 1.7e-69 266.5 205 65.4
CANSAT25G0430 Cannabis sativa HOM05D007279 ORTHO05D009212 1.7e-69 266.5 211 67.3
QL09p032239 Quercus lobata HOM05D007279 ORTHO05D009212 2.2e-69 266.2 213 71.4
CAN.G405.7 Capsicum annuum HOM05D007279 ORTHO05D009212 1.1e-68 263.8 203 70.0
Lj1g0002247 Lotus japonicus HOM05D007279 ORTHO05D009212 1.4e-68 263.5 210 64.8
Psat5g084400 Pisum sativum HOM05D007279 ORTHO05D009212 4.2e-68 261.9 212 63.7
Medtr3g088645 Medicago truncatula HOM05D007279 ORTHO05D009212 5.4e-68 261.5 213 62.0
Phvul.009G130400 Phaseolus vulgaris HOM05D007279 ORTHO05D009212 5.4e-68 261.5 213 67.1
VMungo1309G2060 Vigna mungo HOM05D007279 ORTHO05D009212 5.4e-68 261.5 206 68.4
Nitab4.5_0000317g0110 Nicotiana tabacum HOM05D007279 ORTHO05D009212 7.1e-68 261.2 203 69.5
Nitab4.5_0003485g0020 Nicotiana tabacum HOM05D007279 ORTHO05D009212 7.1e-68 261.2 203 68.5
arahy.Tifrunner.gnm1.ann1.03R76N Arachis hypogaea HOM05D007279 ORTHO05D009212 2.1e-67 259.6 211 65.4
arahy.Tifrunner.gnm1.ann1.G5JU44 Arachis hypogaea HOM05D007279 ORTHO05D009212 2.1e-67 259.6 211 65.4
Ca_16613_v3 Cicer arietinum L. HOM05D007279 ORTHO05D009212 2.1e-67 259.6 208 62.5
CsaV3_7G022180 Cucumis sativus L. HOM05D007279 ORTHO05D009212 2.1e-67 259.6 208 62.5
Lj4A679T22 Lonicera japonica HOM05D007279 ORTHO05D009212 2.1e-67 259.6 202 63.9
MELO3C012712.2 Cucumis melo HOM05D007279 ORTHO05D009212 3.5e-67 258.8 209 63.2
Cc10_g13680 Coffea canephora HOM05D007279 ORTHO05D009212 4.6e-67 258.5 208 69.2
Lj4A677T28 Lonicera japonica HOM05D007279 ORTHO05D009212 6.0e-67 258.1 202 63.4
Solyc04g057980.3 Solanum lycopersicum HOM05D007279 ORTHO05D009212 6.0e-67 258.1 203 68.5
PGSC0003DMG400025319 Solanum tuberosum HOM05D007279 ORTHO05D009212 6.0e-67 258.1 203 70.4
Sopen04g025840 Solanum pennellii HOM05D007279 ORTHO05D009212 2.3e-66 256.1 203 70.0
THA.LOC104808254 Tarenaya hassleriana HOM05D007279 ORTHO05D009212 3.0e-66 255.8 144 81.2
ClCG09G021820 Citrullus lanatus HOM05D007279 ORTHO05D009212 5.1e-66 255.0 204 67.2
Thhalv10026209m.g Eutrema salsugineum HOM05D007279 ORTHO05D009212 8.7e-66 254.2 146 80.8
Sp7g35570 Schrenkiella parvula HOM05D007279 ORTHO05D009212 1.1e-65 253.8 146 80.8
A08p22940 Brassica napus HOM05D007279 ORTHO05D009212 1.5e-65 253.4 146 80.1
Sed0026443 Sechium edule HOM05D007279 ORTHO05D009212 1.9e-65 253.1 140 85.0
AUR62007704 Chenopodium quinoa HOM05D007279 ORTHO05D009212 2.5e-65 252.7 147 78.9
EL10Ac1g01365 Beta vulgaris HOM05D007279 ORTHO05D009212 3.3e-65 252.3 205 63.9
BraA08t34256Z Brassica rapa HOM05D007279 ORTHO05D009212 3.3e-65 252.3 146 79.5
Aqoxy6G00304 Aquilegia oxysepala HOM05D007279 ORTHO05D009212 4.3e-65 251.9 201 64.2
BcaC01g00366 Brassica carinata HOM05D007279 ORTHO05D009212 4.3e-65 251.9 146 79.5
C03p78920 Brassica napus HOM05D007279 ORTHO05D009212 4.3e-65 251.9 146 79.5
BolC3t20136H Brassica oleracea HOM05D007279 ORTHO05D009212 4.3e-65 251.9 146 79.5
Aa31LG6G14860 Aethionema arabicum HOM05D007279 ORTHO05D009212 5.6e-65 251.5 148 79.1
Sabra02G0061000 Salix brachista HOM05D007279 ORTHO05D009212 5.6e-65 251.5 136 86.8
CARHR246340 Cardamine hirsuta HOM05D007279 ORTHO05D009212 7.3e-65 251.1 146 80.1
AUR62013436 Chenopodium quinoa HOM05D007279 ORTHO05D009212 9.6e-65 250.8 147 78.2
BcaB03g12324 Brassica carinata HOM05D007279 ORTHO05D009212 1.3e-64 250.4 146 78.8
Migut.C01071 Erythranthe guttata HOM05D007279 ORTHO05D009212 1.3e-64 250.4 213 62.4
Hma1.2p1_0880F.1_g231840 Hydrangea macrophylla HOM05D007279 ORTHO05D009212 2.8e-64 249.2 212 64.2
DCAR_016660 Daucus carota HOM05D007279 ORTHO05D009212 3.6e-64 248.8 199 64.8
Nn5g28445 Nelumbo nucifera HOM05D007279 ORTHO05D009212 4.8e-64 248.4 210 64.8
AL7G12720 Arabidopsis lyrata HOM05D007279 ORTHO05D009212 1.4e-63 246.9 146 79.5
AT4G37925 Arabidopsis thaliana HOM05D007279 ORTHO05D009212 1.4e-63 246.9 146 79.5
Actinidia15209 Actinidia chinensis HOM05D000237 ORTHO05D006530 1.8e-63 246.5 146 81.5
Lsat_1_v5_gn_1_7161 Lactuca sativa HOM05D007279 ORTHO05D009212 1.8e-63 246.5 146 80.1
Ah.05g169060 Amaranthus hybridus HOM05D007279 ORTHO05D009212 4.0e-63 245.4 205 59.5
HanXRQChr02g0045151 Helianthus annuus HOM05D007279 ORTHO05D009212 4.0e-63 245.4 149 78.5
Carub.0007s0229 Capsella rubella HOM05D007279 ORTHO05D009212 4.5e-62 241.9 146 78.1
ECA247G0566 Erigeron canadensis HOM05D000006 ORTHO05D000001 4.5e-62 241.9 145 78.6
Rhsim02G0114000 Rhododendron simsii HOM05D007279 ORTHO05D009212 1.7e-61 240.0 207 61.8
Rhsim02G0113400 Rhododendron simsii HOM05D007279 ORTHO05D009212 1.4e-60 236.9 212 62.7
unitig_46.g18082 Utricularia gibba HOM05D007279 ORTHO05D009212 2.4e-60 236.1 140 80.0
Os04g0539000 Oryza sativa ssp. japonica HOM05D007279 ORTHO05D009212 4.2e-60 235.3 145 75.9
PSO528G0084 Papaver somniferum HOM05D007279 ORTHO05D009212 4.2e-60 235.3 196 60.7
Rhsim02G0113900 Rhododendron simsii HOM05D007279 ORTHO05D009212 7.1e-60 234.6 204 66.7
MBI03_g13490_MAGBIO Magnolia biondii HOM05D007279 ORTHO05D009212 3.5e-59 232.3 208 66.8
PSO170G3576 Papaver somniferum HOM05D007279 ORTHO05D009212 7.9e-59 231.1 196 60.2
Potri.002G077600 Populus trichocarpa HOM05D007279 ORTHO05D009212 7.9e-59 231.1 173 72.8
vmacro17341 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 5.1e-58 228.4 227 56.8
ATR0681G064 Amborella trichopoda HOM05D007279 ORTHO05D009212 8.7e-58 227.6 125 83.2
FAN15G0564 Fragaria x ananassa HOM05D000237 ORTHO05D006530 1.9e-57 226.5 209 58.9
Zm00001eb075370 Zea mays HOM05D007279 ORTHO05D009212 8.1e-56 221.1 144 75.0
SEGI_28724 Sequoiadendron giganteum HOM05D007279 ORTHO05D009212 6.0e-51 204.9 144 67.4
CDE08G0899 Ceratophyllum demersum HOM05D007279 ORTHO05D009212 1.1e-49 200.7 148 67.6
Thecc.08G133700 Theobroma cacao HOM05D007279 ORTHO05D009212 1.0e-45 187.6 149 69.8
Pp3c1_14910 Physcomitrium patens HOM05D007279 ORTHO05D009212 8.4e-45 184.5 132 66.7
AL3G19570 Arabidopsis lyrata HOM05D007279 ORTHO05D009212 1.3e-42 177.2 146 62.3
SMO339G0044 Selaginella moellendorffii HOM05D007279 ORTHO05D009212 5.1e-42 175.3 127 66.1
CBR_g26037 Chara braunii HOM05D007279 ORTHO05D009212 8.7e-42 174.5 133 61.7
TPR.G6347 Trifolium pratense HOM05D007279 ORTHO05D009212 2.9e-37 159.5 92 79.3
AagrBONN_evm.TU.Sc2ySwM_344.1177 Anthoceros agrestis HOM05D007279 ORTHO05D009212 6.5e-37 158.3 142 54.9
Mapoly0063s0013 Marchantia polymorpha HOM05D007279 ORTHO05D009212 2.5e-36 156.4 131 56.5
TAR623G1519 Trochodendron aralioides HOM05D007279 ORTHO05D009212 3.7e-32 142.5 175 47.4
vmacro17338 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 1.8e-31 140.2 125 61.6
SalBow7G1271 Salvia bowleyana HOM05D007279 ORTHO05D009212 1.4e-23 114.0 143 46.9
vmacro17312 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 1.8e-23 113.6 71 73.2
Zm00001eb427570 Zea mays HOM05D007279 ORTHO05D009212 4.1e-23 112.5 72 75.0
Oeu047171.1 Olea europaea HOM05D004195 ORTHO05D005309 4.8e-16 89.0 133 42.1


User provided reference genes

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