Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10002337m.g Citrus clementina HOM05D007630 ORTHO05D009637 7.6e-135 483.8 238 100.0
Hma1.2p1_0157F.1_g069300 Hydrangea macrophylla HOM05D007630 ORTHO05D009637 1.1e-122 443.4 237 92.0
QL02p103828 Quercus lobata HOM05D007630 ORTHO05D009637 5.6e-122 441.0 235 91.9
GSVIVG01023115001 Vitis vinifera HOM05D007630 ORTHO05D009637 9.6e-122 440.3 238 90.3
Manes.06G015300 Manihot esculenta HOM05D007630 ORTHO05D009637 2.1e-121 439.1 234 91.0
Potri.004G231000 Populus trichocarpa HOM05D007630 ORTHO05D009637 6.2e-121 437.6 240 90.8
CSS0024546 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 1.1e-120 436.8 234 90.6
Actinidia17707 Actinidia chinensis HOM05D007630 ORTHO05D009637 1.4e-120 436.4 237 89.9
Sabra01G0176100 Salix brachista HOM05D007630 ORTHO05D009637 2.4e-120 435.6 235 91.5
Actinidia11717 Actinidia chinensis HOM05D007630 ORTHO05D009637 3.1e-120 435.3 237 89.0
Atru.chr6.70 Acer truncatum HOM05D007630 ORTHO05D009637 1.2e-119 433.3 234 93.6
TWI59G0438 Tripterygium wilfordii HOM05D007630 ORTHO05D009637 2.6e-119 432.2 232 91.4
Cpa.g.sc246.13 Carica papaya HOM05D007630 ORTHO05D009637 4.5e-119 431.4 235 90.6
Phvul.003G090300 Phaseolus vulgaris HOM05D007630 ORTHO05D009637 2.2e-118 429.1 235 89.4
Rhsim11G0114600 Rhododendron simsii HOM05D007630 ORTHO05D009637 2.9e-118 428.7 237 88.6
Glyma.07G270900 Glycine max HOM05D007630 ORTHO05D009637 4.9e-118 427.9 232 88.8
Glyma.17G003000 Glycine max HOM05D007630 ORTHO05D009637 2.5e-117 425.6 232 89.7
Lj4g0008184 Lotus japonicus HOM05D007630 ORTHO05D009637 3.2e-117 425.2 235 89.4
Nn5g27111 Nelumbo nucifera HOM05D007630 ORTHO05D009637 2.1e-116 422.5 233 88.4
RcHm_v2.0_Chr7g0218271 Rosa chinensis HOM05D007630 ORTHO05D009637 2.1e-116 422.5 243 86.8
Haze_09954 Corylus avellana HOM05D007630 ORTHO05D009637 6.0e-116 421.0 221 93.7
Medtr4g134400 Medicago truncatula HOM05D007630 ORTHO05D009637 6.0e-116 421.0 231 87.4
TPR.G5932 Trifolium pratense HOM05D007630 ORTHO05D009637 6.0e-116 421.0 233 88.0
Cc02_g23840 Coffea canephora HOM05D007630 ORTHO05D009637 1.3e-115 419.9 237 86.1
CSS0032395 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 1.8e-115 419.5 223 91.0
vmacro01631 Vaccinium macrocarpon HOM05D007630 ORTHO05D009637 3.0e-115 418.7 229 89.5
Lj9A243T50 Lonicera japonica HOM05D007630 ORTHO05D009637 5.1e-115 417.9 231 88.3
DCAR_001874 Daucus carota HOM05D007630 ORTHO05D009637 1.1e-114 416.8 236 86.4
FvH4_5g27180 Fragaria vesca HOM05D007630 ORTHO05D009637 1.9e-114 416.0 243 85.6
Psat4g001800 Pisum sativum HOM05D007630 ORTHO05D009637 3.3e-114 415.2 232 86.6
Prupe.1G587600 Prunus persica HOM05D007630 ORTHO05D009637 3.3e-114 415.2 245 84.9
Peaxi162Scf00194g00929 Petunia axillaris HOM05D007630 ORTHO05D009637 4.3e-114 414.8 237 86.1
FAN04G2951 Fragaria x ananassa HOM05D007630 ORTHO05D009637 2.2e-113 412.5 243 84.8
CAN.G1379.16 Capsicum annuum HOM05D007630 ORTHO05D009637 4.8e-113 411.4 235 85.5
Solyc01g102720.3 Solanum lycopersicum HOM05D007630 ORTHO05D009637 8.2e-113 410.6 235 85.1
Sopen01g045140 Solanum pennellii HOM05D007630 ORTHO05D009637 1.1e-112 410.2 235 85.1
PGSC0003DMG400018220 Solanum tuberosum HOM05D007630 ORTHO05D009637 2.4e-112 409.1 235 84.7
COL.COLO4_31101 Corchorus olitorius HOM05D007630 ORTHO05D009637 3.1e-112 408.7 240 86.2
Nitab4.5_0006947g0030 Nicotiana tabacum HOM05D007630 ORTHO05D009637 3.1e-112 408.7 236 86.4
Thecc.06G066000 Theobroma cacao HOM05D007630 ORTHO05D009637 4.1e-112 408.3 230 87.8
Nitab4.5_0001085g0080 Nicotiana tabacum HOM05D007630 ORTHO05D009637 5.3e-112 407.9 236 86.0
CANSAT01G1787 Cannabis sativa HOM05D007630 ORTHO05D009637 6.9e-112 407.5 235 87.2
FAN18G2712 Fragaria x ananassa HOM05D007630 ORTHO05D009637 4.5e-111 404.8 244 84.0
arahy.Tifrunner.gnm1.ann1.CDQ02R Arachis hypogaea HOM05D007630 ORTHO05D009637 5.9e-111 404.4 244 83.2
arahy.Tifrunner.gnm1.ann1.XQ55VB Arachis hypogaea HOM05D007630 ORTHO05D009637 5.9e-111 404.4 244 83.2
Lalb_Chr07g0176861 Lupinus albus HOM05D007630 ORTHO05D009637 5.9e-111 404.4 236 84.7
FAN13G2616 Fragaria x ananassa HOM05D007630 ORTHO05D009637 7.6e-111 404.1 250 82.4
Hund29384 Selenicereus undatus HOM05D007630 ORTHO05D009637 5.0e-110 401.4 232 83.6
Hund29386 Selenicereus undatus HOM05D007630 ORTHO05D009637 5.0e-110 401.4 232 83.6
MSTRG.16453 Avicennia marina HOM05D007630 ORTHO05D009637 3.2e-109 398.7 236 83.1
AUR62040114 Chenopodium quinoa HOM05D007630 ORTHO05D009637 3.2e-109 398.7 232 84.5
PGR042G3439 Punica granatum HOM05D007630 ORTHO05D009637 7.2e-109 397.5 224 87.5
ECA236G0298 Erigeron canadensis HOM05D007630 ORTHO05D009637 1.6e-108 396.4 243 85.2
Migut.B00699 Erythranthe guttata HOM05D007630 ORTHO05D009637 4.6e-108 394.8 239 81.6
THA.LOC104809043 Tarenaya hassleriana HOM05D007630 ORTHO05D009637 1.4e-107 393.3 235 81.7
Oeu000167.1 Olea europaea HOM05D007630 ORTHO05D009637 1.8e-107 392.9 223 85.7
Duzib192G0579 Durio zibethinus HOM05D007630 ORTHO05D009637 2.3e-107 392.5 225 87.1
Aqoxy6G00011 Aquilegia oxysepala HOM05D007630 ORTHO05D009637 3.0e-107 392.1 237 84.8
HanXRQChr16g0531021 Helianthus annuus HOM05D007630 ORTHO05D009637 1.9e-106 389.4 240 82.1
Eucgr.G00050 Eucalyptus grandis HOM05D007630 ORTHO05D009637 2.8e-105 385.6 228 85.1
MD08G1250400 Malus domestica HOM05D007630 ORTHO05D009637 5.3e-104 381.3 239 82.0
Gohir.A05G160300 Gossypium hirsutum HOM05D007630 ORTHO05D009637 3.8e-102 375.2 238 80.3
Gorai.009G168000 Gossypium raimondii HOM05D007630 ORTHO05D009637 3.8e-102 375.2 238 80.3
Lsat_1_v5_gn_9_82660 Lactuca sativa HOM05D007630 ORTHO05D009637 3.6e-100 368.6 248 77.0
VMungo1215G0090 Vigna mungo HOM05D007630 ORTHO05D009637 3.6e-100 368.6 201 90.5
AT5G49800 Arabidopsis thaliana HOM05D007630 ORTHO05D009637 7.9e-100 367.5 234 76.5
Gorai.011G090500 Gossypium raimondii HOM05D007630 ORTHO05D009637 7.9e-100 367.5 232 81.0
Sp6g11150 Schrenkiella parvula HOM05D007630 ORTHO05D009637 1.8e-99 366.3 234 78.6
Gohir.A10G157500 Gossypium hirsutum HOM05D007630 ORTHO05D009637 3.9e-99 365.2 232 80.6
CDE05G2797 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 4.4e-98 361.7 232 75.4
CDE05G1783 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 1.4e-96 356.7 232 73.7
AL8G23760 Arabidopsis lyrata HOM05D007630 ORTHO05D009637 1.8e-96 356.3 235 75.3
CARHR258980 Cardamine hirsuta HOM05D007630 ORTHO05D009637 5.3e-96 354.8 236 73.7
Aa31sc192G10 Aethionema arabicum HOM05D007630 ORTHO05D009637 7.0e-96 354.4 236 75.4
Carub.0008s0968 Capsella rubella HOM05D007630 ORTHO05D009637 5.9e-95 351.3 239 72.0
ATR1089G051 Amborella trichopoda HOM05D007630 ORTHO05D009637 2.9e-94 349.0 230 77.4
AUR62032498 Chenopodium quinoa HOM05D007630 ORTHO05D009637 2.5e-93 345.9 199 84.4
TAR629G1327 Trochodendron aralioides HOM05D007630 ORTHO05D009637 1.2e-92 343.6 199 85.4
PSO170G3600 Papaver somniferum HOM05D007630 ORTHO05D009637 1.0e-91 340.5 249 73.1
PSO017G5941 Papaver somniferum HOM05D007630 ORTHO05D009637 8.8e-91 337.4 249 73.5
Gohir.D10G083200 Gossypium hirsutum HOM05D007630 ORTHO05D009637 8.2e-89 330.9 232 75.4
DCAR_028500 Daucus carota HOM05D007630 ORTHO05D009637 1.1e-88 330.5 195 84.6
Oeu043594.1 Olea europaea HOM05D007630 ORTHO05D009637 4.5e-87 325.1 181 87.8
SGA_v2.0_scaffold254G45223 Striga asiatica HOM05D007630 ORTHO05D009637 2.2e-86 322.8 232 71.1
Cfa004415 Carpinus fangiana HOM05D000089 ORTHO05D000104 5.0e-78 295.0 221 71.0
Os11g0245500 Oryza sativa ssp. japonica HOM05D007630 ORTHO05D009637 5.2e-75 285.0 246 62.2
SEGI_35985 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 1.2e-71 273.9 224 62.9
MBI06_g17062_MAGBIO Magnolia biondii HOM05D007630 ORTHO05D009637 4.7e-68 261.9 138 91.3
Dinv30982 Davidia involucrata HOM05D007630 ORTHO05D009637 6.3e-65 251.5 139 89.9
Mapoly0105s0042 Marchantia polymorpha HOM05D007630 ORTHO05D009637 8.6e-62 241.1 219 52.5
Gohir.D05G163000 Gossypium hirsutum HOM05D007630 ORTHO05D009637 1.1e-61 240.7 163 74.8
Sc03g0005590 Simmondsia chinensis HOM05D007630 ORTHO05D009637 6.1e-60 235.0 152 75.7
Zm00001eb168190 Zea mays HOM05D007630 ORTHO05D009637 1.5e-58 230.3 240 52.9
SMO198G0095 Selaginella moellendorffii HOM05D007630 ORTHO05D009637 2.7e-55 219.5 219 51.6
MD15G1445600 Malus domestica HOM05D007630 ORTHO05D009637 2.7e-31 139.8 82 80.5
SEGI_15718 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 2.0e-26 123.6 217 33.6
Dinv29656 Davidia involucrata HOM05D007630 ORTHO05D009637 1.5e-21 107.5 121 57.0
HanXRQChr09g0245071 Helianthus annuus HOM05D000066 ORTHO05D000055 1.4e-11 74.3 57 64.9


User provided reference genes

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