Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10001733m.g Citrus clementina HOM05D006958 ORTHO05D008814 2.6e-197 691.8 342 100.0
Atru.chr13.835 Acer truncatum HOM05D006958 ORTHO05D008814 6.6e-156 554.3 342 78.7
Manes.18G046700 Manihot esculenta HOM05D006958 ORTHO05D008814 3.9e-140 501.9 340 73.5
Thecc.08G088500 Theobroma cacao HOM05D006958 ORTHO05D008814 9.5e-139 497.3 341 71.6
TWI12G1073 Tripterygium wilfordii HOM05D006958 ORTHO05D008814 8.1e-138 494.2 343 69.4
Duzib093G1923 Durio zibethinus HOM05D006958 ORTHO05D008814 8.9e-137 490.7 344 71.8
COL.COLO4_28503 Corchorus olitorius HOM05D006958 ORTHO05D008814 2.6e-136 489.2 345 70.1
Gorai.009G220300 Gossypium raimondii HOM05D006958 ORTHO05D008814 2.6e-136 489.2 345 70.4
Prupe.1G422600 Prunus persica HOM05D006958 ORTHO05D008814 3.8e-135 485.3 340 70.0
MD15G1069100 Malus domestica HOM05D006958 ORTHO05D008814 2.4e-134 482.6 339 70.5
Gohir.D05G213600 Gossypium hirsutum HOM05D006958 ORTHO05D008814 4.1e-134 481.9 343 70.3
Haze_22433 Corylus avellana HOM05D006958 ORTHO05D008814 1.5e-131 473.4 343 67.6
CANSAT25G3409 Cannabis sativa HOM05D006958 ORTHO05D008814 1.9e-131 473.0 340 68.5
Cfa013775 Carpinus fangiana HOM05D006958 ORTHO05D008814 1.9e-131 473.0 340 68.2
Potri.002G118300 Populus trichocarpa HOM05D006958 ORTHO05D008814 3.3e-131 472.2 338 70.1
RcHm_v2.0_Chr6g0309651 Rosa chinensis HOM05D006958 ORTHO05D008814 8.1e-130 467.6 337 68.0
THA.LOC104816754 Tarenaya hassleriana HOM05D006958 ORTHO05D008814 7.6e-128 461.1 340 67.1
TAR376G0445 Trochodendron aralioides HOM05D006958 ORTHO05D008814 2.9e-127 459.1 349 65.6
FvH4_2g33060 Fragaria vesca HOM05D006958 ORTHO05D008814 1.1e-126 457.2 335 66.0
FAN24G2490 Fragaria x ananassa HOM05D006958 ORTHO05D008814 1.1e-126 457.2 339 65.8
Actinidia10201 Actinidia chinensis HOM05D006958 ORTHO05D008814 5.4e-126 454.9 339 67.0
ClCG08G016520 Citrullus lanatus HOM05D006958 ORTHO05D008814 2.1e-125 453.0 343 64.4
FAN15G0662 Fragaria x ananassa HOM05D006958 ORTHO05D008814 4.6e-125 451.8 338 65.1
FAN27G0228 Fragaria x ananassa HOM05D006958 ORTHO05D008814 6.0e-125 451.4 340 64.7
CiPaw.07G174600 Carya illinoinensis HOM05D006958 ORTHO05D008814 5.1e-124 448.4 343 66.5
Dinv39219 Davidia involucrata HOM05D006958 ORTHO05D008814 5.1e-124 448.4 342 65.8
CSS0020437 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 1.1e-123 447.2 340 66.5
FAN20G1263 Fragaria x ananassa HOM05D006958 ORTHO05D008814 1.3e-122 443.7 351 62.4
CsaV3_2G026090 Cucumis sativus L. HOM05D006958 ORTHO05D008814 2.1e-122 443.0 339 63.7
Actinidia22696 Actinidia chinensis HOM05D006958 ORTHO05D008814 4.8e-122 441.8 342 64.9
Sed0002112 Sechium edule HOM05D006958 ORTHO05D008814 5.3e-121 438.3 340 63.5
QL12p038133 Quercus lobata HOM05D006958 ORTHO05D008814 6.9e-121 438.0 341 64.5
Rhsim06G0062400 Rhododendron simsii HOM05D006958 ORTHO05D008814 7.6e-120 434.5 341 63.9
CARHR283790 Cardamine hirsuta HOM05D006958 ORTHO05D008814 4.9e-119 431.8 344 64.0
MELO3C010802.2 Cucumis melo HOM05D006958 ORTHO05D008814 4.9e-119 431.8 339 62.2
CSS0026693 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 1.1e-118 430.6 340 65.6
Thhalv10023590m.g Eutrema salsugineum HOM05D006958 ORTHO05D008814 1.9e-118 429.9 342 63.2
AT1G59600 Arabidopsis thaliana HOM05D006958 ORTHO05D008814 7.9e-117 424.5 340 63.2
Lalb_Chr14g0368181 Lupinus albus HOM05D006958 ORTHO05D008814 1.0e-116 424.1 336 62.2
Cpa.g.sc142.28 Carica papaya HOM05D006958 ORTHO05D008814 3.9e-116 422.2 277 72.6
Eucgr.F02250 Eucalyptus grandis HOM05D006958 ORTHO05D008814 6.7e-116 421.4 344 59.3
arahy.Tifrunner.gnm1.ann1.JFD9T8 Arachis hypogaea HOM05D006958 ORTHO05D008814 1.1e-115 420.6 334 60.8
AL2G17470 Arabidopsis lyrata HOM05D006958 ORTHO05D008814 1.3e-114 417.2 340 62.6
Gohir.A05G210300 Gossypium hirsutum HOM05D006958 ORTHO05D008814 1.6e-114 416.8 277 74.0
Carub.0002s0585 Capsella rubella HOM05D006958 ORTHO05D008814 4.8e-114 415.2 340 62.4
PGR031G1511 Punica granatum HOM05D006958 ORTHO05D008814 1.8e-113 413.3 341 60.7
C01p36350 Brassica napus HOM05D006958 ORTHO05D008814 2.4e-113 412.9 338 60.9
BolC1t03593H Brassica oleracea HOM05D006958 ORTHO05D008814 3.8e-111 405.6 340 60.9
A01p28700 Brassica napus HOM05D006958 ORTHO05D008814 1.1e-110 404.1 339 59.6
BraA01t03033Z Brassica rapa HOM05D006958 ORTHO05D008814 1.4e-110 403.7 339 59.6
Sp2g04980 Schrenkiella parvula HOM05D006958 ORTHO05D008814 2.4e-110 402.9 343 58.9
Lj5g0000926 Lotus japonicus HOM05D006958 ORTHO05D008814 1.2e-109 400.6 338 59.8
Sc02g0007890 Simmondsia chinensis HOM05D006958 ORTHO05D008814 1.9e-107 393.3 338 58.3
Ca_13215_v3 Cicer arietinum L. HOM05D006958 ORTHO05D008814 2.5e-107 392.9 339 59.3
Nitab4.5_0002484g0050 Nicotiana tabacum HOM05D006958 ORTHO05D008814 4.3e-107 392.1 340 60.6
Hund05299 Selenicereus undatus HOM05D006958 ORTHO05D008814 4.3e-107 392.1 346 58.7
Lj4A758G77 Lonicera japonica HOM05D006958 ORTHO05D008814 9.6e-107 391.0 376 55.1
Aa31LG2G10550 Aethionema arabicum HOM05D006958 ORTHO05D008814 1.3e-106 390.6 426 49.3
Nitab4.5_0004654g0020 Nicotiana tabacum HOM05D006958 ORTHO05D008814 1.3e-106 390.6 338 59.8
TPR.G37796 Trifolium pratense HOM05D006958 ORTHO05D008814 2.1e-106 389.8 338 59.2
Sopen04g031420 Solanum pennellii HOM05D006958 ORTHO05D008814 6.9e-105 384.8 338 58.9
Glyma.14G089018 Glycine max HOM05D006958 ORTHO05D008814 1.2e-104 384.0 328 60.4
Solyc04g077820.4 Solanum lycopersicum HOM05D006958 ORTHO05D008814 1.5e-104 383.6 338 58.6
SGA_v2.0_scaffold28G11833 Striga asiatica HOM05D006958 ORTHO05D008814 2.0e-104 383.3 337 58.2
BcaB04g20216 Brassica carinata HOM05D006958 ORTHO05D008814 1.7e-103 380.2 344 58.4
Migut.N02783 Erythranthe guttata HOM05D006958 ORTHO05D008814 2.2e-103 379.8 337 55.5
arahy.Tifrunner.gnm1.ann1.8TQ0W2 Arachis hypogaea HOM05D006958 ORTHO05D008814 8.4e-103 377.9 334 57.2
MSTRG.24376 Avicennia marina HOM05D006958 ORTHO05D008814 1.4e-102 377.1 338 56.8
HanXRQChr08g0229631 Helianthus annuus HOM05D006958 ORTHO05D008814 3.5e-101 372.5 340 58.2
CAN.G724.27 Capsicum annuum HOM05D006958 ORTHO05D008814 6.0e-101 371.7 334 57.5
PGSC0003DMG400010608 Solanum tuberosum HOM05D006958 ORTHO05D008814 3.9e-100 369.0 352 56.0
Medtr1g018000 Medicago truncatula HOM05D006958 ORTHO05D008814 5.1e-100 368.6 338 58.0
MBI16_g23890_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D008814 6.7e-100 368.2 347 57.3
Lsat_1_v5_gn_6_110920 Lactuca sativa HOM05D006958 ORTHO05D008814 1.5e-99 367.1 351 56.1
Phvul.001G028000 Phaseolus vulgaris HOM05D006958 ORTHO05D008814 1.2e-96 357.5 329 55.9
VMungo0647G0836 Vigna mungo HOM05D006958 ORTHO05D008814 4.5e-96 355.5 314 56.7
EL10Ac1g02379 Beta vulgaris HOM05D006958 ORTHO05D008814 3.8e-95 352.4 272 61.0
Peaxi162Scf00081g02114 Petunia axillaris HOM05D006958 ORTHO05D008814 6.1e-93 345.1 338 53.0
PSO541G2153 Papaver somniferum HOM05D006958 ORTHO05D008814 1.4e-92 344.0 347 52.2
Aqoxy6G02602 Aquilegia oxysepala HOM05D006958 ORTHO05D008814 1.8e-92 343.6 344 52.3
ATR0739G011 Amborella trichopoda HOM05D006958 ORTHO05D008814 8.8e-92 341.3 326 54.9
PSO675G0096 Papaver somniferum HOM05D006958 ORTHO05D008814 1.1e-91 340.9 349 51.9
DCAR_020049 Daucus carota HOM05D006958 ORTHO05D008814 8.2e-90 334.7 338 51.5
ECA246G2880 Erigeron canadensis HOM05D006958 ORTHO05D008814 8.2e-90 334.7 282 61.0
PSO541G3524 Papaver somniferum HOM05D006958 ORTHO05D008814 1.1e-86 324.3 297 56.6
unitig_744.g24127 Utricularia gibba HOM05D006958 ORTHO05D008814 1.1e-83 314.3 334 49.4
HPP92_009523 Vanilla planifolia HOM05D006958 ORTHO05D008814 1.3e-82 310.8 338 50.0
GSVIVG01009341001 Vitis vinifera HOM05D006958 ORTHO05D008814 1.7e-82 310.5 210 70.5
Zm00001eb325900 Zea mays HOM05D006958 ORTHO05D008814 9.7e-75 284.6 343 45.8
Cc10_g05800 Coffea canephora HOM05D006958 ORTHO05D008814 1.8e-73 280.4 210 64.3
CDE04G0359 Ceratophyllum demersum HOM05D006958 ORTHO05D008814 2.3e-60 236.9 245 51.4
Psat6g018160 Pisum sativum HOM05D006958 ORTHO05D008814 4.5e-56 222.6 292 46.2
Pp3c12_1620 Physcomitrium patens HOM05D006958 ORTHO05D008814 5.5e-54 215.7 280 40.4
AUR62022479 Chenopodium quinoa HOM05D006958 ORTHO05D008814 1.4e-49 201.1 173 56.6
Oeu049903.1 Olea europaea HOM05D006958 ORTHO05D008814 1.6e-48 197.6 172 57.6
HPP92_009559 Vanilla planifolia HOM05D006958 ORTHO05D008814 2.9e-42 176.8 185 51.9
arahy.Tifrunner.gnm1.ann1.D1UQZZ Arachis hypogaea HOM05D006958 ORTHO05D008814 1.1e-41 174.9 273 39.9
SMO334G0101 Selaginella moellendorffii HOM05D006958 ORTHO05D008814 4.3e-38 162.9 266 36.5
CBR_g51257 Chara braunii HOM05D006958 ORTHO05D008814 6.4e-34 149.1 311 31.8
AUR62022480 Chenopodium quinoa HOM05D006958 ORTHO05D008814 7.8e-32 142.1 127 55.9
BolC4t24190H Brassica oleracea HOM05D006958 ORTHO05D008814 1.3e-31 141.4 130 56.2
SEGI_02529 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 2.3e-31 140.6 172 43.0
Os01g0593100 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 6.6e-31 139.0 198 42.9
Os07g0586000 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 3.3e-30 136.7 169 46.2
Cfa010280 Carpinus fangiana HOM05D006958 ORTHO05D008814 4.3e-30 136.3 93 74.2
BcaC02g10644 Brassica carinata HOM05D006958 ORTHO05D008814 1.1e-25 121.7 168 44.6
C04p26140 Brassica napus HOM05D006958 ORTHO05D008814 4.1e-25 119.8 105 57.1
MBI15_g25904_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D017181 4.7e-21 106.3 128 47.7
Psat7g107960 Pisum sativum HOM05D006958 ORTHO05D008814 2.2e-18 97.4 100 52.0
SEGI_26692 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 2.7e-16 90.5 72 52.8
Glyma.07G264001 Glycine max HOM05D006958 ORTHO05D008814 6.9e-12 75.9 78 52.6
Psat0s3396g0160 Pisum sativum HOM05D006958 ORTHO05D008814 2.3e-07 60.8 40 65.0
Ah.09g227430 Amaranthus hybridus HOM05D006958 ORTHO05D008814 3.0e-07 60.5 64 50.0
EL10Ac1g02376 Beta vulgaris HOM05D006958 ORTHO05D008814 4.3e-06 56.6 68 45.6


User provided reference genes

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