Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10001558m.g Citrus clementina HOM05D007327 ORTHO05D009342 5.0e-210 734.2 370 100.0
Atru.chr13.2102 Acer truncatum HOM05D007327 ORTHO05D009342 7.1e-164 580.9 358 80.7
COL.COLO4_08563 Corchorus olitorius HOM05D007327 ORTHO05D009342 1.6e-163 579.7 354 79.4
Thecc.08G153100 Theobroma cacao HOM05D007327 ORTHO05D009342 1.6e-163 579.7 354 80.5
Cfa018321 Carpinus fangiana HOM05D007327 ORTHO05D009342 7.8e-163 577.4 361 75.3
CSS0015629 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 2.3e-162 575.9 367 77.7
Manes.18G092400 Manihot esculenta HOM05D007327 ORTHO05D009342 1.1e-161 573.5 365 75.1
Prupe.8G031100 Prunus persica HOM05D007327 ORTHO05D009342 1.1e-161 573.5 367 74.1
Dinv25868 Davidia involucrata HOM05D007327 ORTHO05D009342 3.6e-160 568.5 368 74.7
TWI60G1090 Tripterygium wilfordii HOM05D007327 ORTHO05D009342 5.3e-159 564.7 358 74.3
Gorai.002G114900 Gossypium raimondii HOM05D007327 ORTHO05D009342 1.5e-158 563.1 354 77.7
Actinidia17791 Actinidia chinensis HOM05D007327 ORTHO05D009342 9.9e-158 560.5 367 73.0
Gohir.D01G089200 Gossypium hirsutum HOM05D007327 ORTHO05D009342 1.3e-157 560.1 354 77.4
GSVIVG01034535001 Vitis vinifera HOM05D007327 ORTHO05D009342 4.9e-157 558.1 359 75.2
Gohir.A01G103900 Gossypium hirsutum HOM05D007327 ORTHO05D009342 2.4e-156 555.8 354 76.6
Potri.002G067900 Populus trichocarpa HOM05D007327 ORTHO05D009342 1.2e-155 553.5 357 77.0
Hma1.2p1_0105F.1_g050650 Hydrangea macrophylla HOM05D007327 ORTHO05D009342 6.7e-154 547.7 352 72.7
TAR628G0726 Trochodendron aralioides HOM05D007327 ORTHO05D009342 1.1e-153 547.0 360 72.2
arahy.Tifrunner.gnm1.ann1.S2I56E Arachis hypogaea HOM05D007327 ORTHO05D009342 9.6e-153 543.9 363 72.7
MD05G1026600 Malus domestica HOM05D007327 ORTHO05D009342 2.8e-152 542.3 361 72.0
arahy.Tifrunner.gnm1.ann1.LUB646 Arachis hypogaea HOM05D007327 ORTHO05D009342 6.9e-151 537.7 363 72.2
CiPaw.15G016000 Carya illinoinensis HOM05D007327 ORTHO05D009342 1.2e-150 537.0 331 75.8
Eucgr.F04237 Eucalyptus grandis HOM05D007327 ORTHO05D009342 1.2e-150 537.0 355 72.1
CANSAT25G1895 Cannabis sativa HOM05D007327 ORTHO05D009342 1.5e-150 536.6 359 69.9
RcHm_v2.0_Chr6g0275381 Rosa chinensis HOM05D007327 ORTHO05D009342 4.5e-150 535.0 358 70.9
FvH4_2g13700 Fragaria vesca HOM05D007327 ORTHO05D009342 5.8e-150 534.6 353 71.7
ECA247G1449 Erigeron canadensis HOM05D007327 ORTHO05D009342 3.8e-149 531.9 358 68.2
Glyma.02G081500 Glycine max HOM05D007327 ORTHO05D009342 1.4e-148 530.0 355 71.0
Lalb_Chr19g0130241 Lupinus albus HOM05D007327 ORTHO05D009342 1.4e-148 530.0 362 71.3
Nn5g28751 Nelumbo nucifera HOM05D007327 ORTHO05D009342 7.1e-148 527.7 367 69.2
Peaxi162Scf00599g00511 Petunia axillaris HOM05D007327 ORTHO05D009342 6.0e-147 524.6 354 69.2
CsaV3_6G005130 Cucumis sativus L. HOM05D007327 ORTHO05D009342 7.9e-147 524.2 358 70.4
Sed0007638 Sechium edule HOM05D007327 ORTHO05D009342 3.0e-146 522.3 352 69.9
HanXRQChr04g0108941 Helianthus annuus HOM05D007327 ORTHO05D009342 6.7e-146 521.2 353 67.1
Lj2g0012645 Lotus japonicus HOM05D007327 ORTHO05D009342 6.7e-146 521.2 364 72.5
Lsat_1_v5_gn_1_6021 Lactuca sativa HOM05D007327 ORTHO05D009342 1.9e-145 519.6 351 66.4
Phvul.004G094900 Phaseolus vulgaris HOM05D007327 ORTHO05D009342 1.9e-145 519.6 364 70.1
MELO3C029831.2 Cucumis melo HOM05D007327 ORTHO05D009342 3.3e-145 518.8 358 69.0
QL02p039069 Quercus lobata HOM05D007327 ORTHO05D009342 1.6e-144 516.5 458 57.9
Psat1g101680 Pisum sativum HOM05D007327 ORTHO05D009342 8.2e-144 514.2 353 67.7
Solyc04g071470.3 Solanum lycopersicum HOM05D007327 ORTHO05D009342 8.2e-144 514.2 357 67.5
PGR044G2476 Punica granatum HOM05D007327 ORTHO05D009342 1.8e-143 513.1 355 72.4
PGR100G0004 Punica granatum HOM05D007327 ORTHO05D009342 1.8e-143 513.1 355 72.4
Sopen04g027430 Solanum pennellii HOM05D007327 ORTHO05D009342 4.0e-143 511.9 357 67.5
PGR080G0004 Punica granatum HOM05D007327 ORTHO05D009342 6.9e-143 511.1 355 72.4
Oeu051268.1 Olea europaea HOM05D007327 ORTHO05D009342 3.4e-142 508.8 385 63.4
Duzib093G0512 Durio zibethinus HOM05D007327 ORTHO05D009342 4.5e-142 508.4 355 74.1
FAN15G0044 Fragaria x ananassa HOM05D007327 ORTHO05D009342 1.3e-141 506.9 417 60.7
FAN24G0347 Fragaria x ananassa HOM05D007327 ORTHO05D009342 1.7e-141 506.5 417 60.7
TPR.G31184 Trifolium pratense HOM05D007327 ORTHO05D009342 2.2e-141 506.1 354 68.6
PSO541G6301 Papaver somniferum HOM05D007327 ORTHO05D009342 3.8e-141 505.4 361 65.9
Nitab4.5_0002452g0030 Nicotiana tabacum HOM05D007327 ORTHO05D009342 7.4e-137 491.1 368 64.4
Medtr6g036750 Medicago truncatula HOM05D007327 ORTHO05D009342 1.6e-136 490.0 353 65.7
SGA_v2.0_scaffold24G10336 Striga asiatica HOM05D007327 ORTHO05D009342 1.0e-133 480.7 353 64.9
Aqoxy6G00379 Aquilegia oxysepala HOM05D007327 ORTHO05D009342 3.2e-132 475.7 336 65.5
ATR0582G033 Amborella trichopoda HOM05D007327 ORTHO05D009342 1.2e-131 473.8 352 62.5
Os01g0867200 Oryza sativa ssp. japonica HOM05D007327 ORTHO05D009342 6.7e-130 468.0 352 60.5
Haze_17755 Corylus avellana HOM05D007327 ORTHO05D009342 6.3e-128 461.5 505 50.3
Zm00001eb146700 Zea mays HOM05D007327 ORTHO05D009342 1.1e-127 460.7 352 60.2
PSO675G1203 Papaver somniferum HOM05D007327 ORTHO05D009342 4.1e-127 458.8 363 60.6
HPP92_000065 Vanilla planifolia HOM05D007327 ORTHO05D009342 1.2e-126 457.2 359 59.9
ClCG08G007070 Citrullus lanatus HOM05D007327 ORTHO05D009342 8.5e-117 424.5 463 50.1
Hund26695 Selenicereus undatus HOM05D007327 ORTHO05D009342 2.5e-116 422.9 355 59.7
Cc10_g14850 Coffea canephora HOM05D007327 ORTHO05D009342 8.0e-107 391.3 298 64.1
Glyma.16G166900 Glycine max HOM05D007327 ORTHO05D009342 1.8e-87 327.0 195 76.9
Sabra02G0053500 Salix brachista HOM05D007327 ORTHO05D009342 2.0e-86 323.6 241 65.6
unitig_26.g9897 Utricularia gibba HOM05D007327 ORTHO05D009342 1.7e-85 320.5 291 54.3
Pp3c20_20940 Physcomitrium patens HOM05D007327 ORTHO05D009342 7.3e-84 315.1 361 43.5
Ca_25918_v3 Cicer arietinum L. HOM05D007327 ORTHO05D009342 6.4e-80 302.0 199 71.4
SMO335G0004 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 1.2e-78 297.7 368 41.6
SalBow7G2928 Salvia bowleyana HOM05D007327 ORTHO05D009342 2.5e-76 290.0 344 47.4
VMungo0464G2010 Vigna mungo HOM05D007327 ORTHO05D009342 2.1e-70 270.4 217 62.2
DCAR_010093 Daucus carota HOM05D007327 ORTHO05D009342 5.1e-69 265.8 163 74.8
Migut.C00996 Erythranthe guttata HOM05D007327 ORTHO05D009342 5.2e-66 255.8 144 78.5
AagrBONN_evm.TU.Sc2ySwM_344.2825 Anthoceros agrestis HOM05D007327 ORTHO05D009342 3.9e-61 239.6 235 50.2
SHI09061 Sapria himalayana HOM05D007327 ORTHO05D009342 5.6e-60 235.7 250 53.6
Cc00_g31580 Coffea canephora HOM05D007327 ORTHO05D009342 4.2e-55 219.5 141 71.6
Cpa.g.sc21.198 Carica papaya HOM05D007327 ORTHO05D009342 9.3e-55 218.4 160 71.9
SMO228G0199 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 1.3e-48 198.0 367 32.2
Cpa.g.c33136.2 Carica papaya HOM05D007327 ORTHO05D009342 2.4e-42 177.2 117 74.4
MCO03G524 Micromonas commoda HOM05D007327 ORTHO05D009342 7.6e-41 172.2 422 28.9
Glyma.16G166950 Glycine max HOM05D007327 ORTHO05D009342 4.0e-34 149.8 112 63.4
PRCOL_00001255 Prasinoderma coloniale HOM05D007327 ORTHO05D009342 6.9e-34 149.1 401 29.9
MBI17_g33117_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 7.4e-28 129.0 75 72.0
MBI17_g25900_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.6e-27 127.9 102 59.8
SalBow7G1135 Salvia bowleyana HOM05D007327 ORTHO05D009342 3.7e-27 126.7 103 59.2
CDE02G1931 Ceratophyllum demersum HOM05D007327 ORTHO05D009342 5.3e-26 122.9 70 75.7
SEGI_20996 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 6.9e-26 122.5 108 51.9
Cc07_g11820 Coffea canephora HOM05D007327 ORTHO05D009342 9.0e-26 122.1 70 72.9
Cc10_g14400 Coffea canephora HOM05D007327 ORTHO05D009342 9.0e-26 122.1 70 72.9
MBI17_g33124_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 2.0e-25 120.9 113 54.0
SEGI_01400 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 3.2e-23 113.6 109 48.6
CSS0013095 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 3.5e-22 110.2 63 82.5
CSS0009897 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 4.6e-22 109.8 63 81.0
CSS0040121 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.3e-21 108.2 63 81.0
CSS0048751 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 3.9e-21 106.7 63 81.0
PSO541G3507 Papaver somniferum HOM05D000022 ORTHO05D000071 5.7e-20 102.8 55 81.8
Cre12.g548350 Chlamydomonas reinhardtii HOM05D007327 ORTHO05D009342 8.2e-19 99.0 294 28.2
HPP92_000064 Vanilla planifolia HOM05D007327 ORTHO05D009342 1.3e-16 91.7 73 56.2
CSS0014849 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 2.9e-16 90.5 53 81.1
MBI09_g12042_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 8.5e-16 89.0 54 66.7
Actinidia27255 Actinidia chinensis HOM05D007327 ORTHO05D009342 6.7e-13 79.3 160 35.6
MBI17_g33120_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.5e-12 78.2 96 36.5
SEGI_01531 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 4.3e-12 76.6 54 61.1
arahy.Tifrunner.gnm1.ann1.B7BSQF Arachis hypogaea HOM05D000002 ORTHO05D000047 1.5e-09 68.2 197 28.4
arahy.Tifrunner.gnm1.ann1.DQ97IN Arachis hypogaea HOM05D007327 ORTHO05D009342 1.1e-07 62.0 91 50.5
arahy.Tifrunner.gnm1.ann1.KIIE1S Arachis hypogaea HOM05D000198 ORTHO05D003365 4.2e-07 60.1 58 53.4
Cpa.g.sc21.203 Carica papaya HOM05D007327 ORTHO05D118724 1.2e-06 58.5 49 53.1


User provided reference genes

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