Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10001458m.g Citrus clementina HOM05D006137 ORTHO05D007697 6.2e-219 763.8 389 100.0
Atru.chr6.1520 Acer truncatum HOM05D006137 ORTHO05D007697 3.8e-152 542.0 372 75.8
TWI15G1160 Tripterygium wilfordii HOM05D006137 ORTHO05D007697 2.5e-151 539.3 392 73.0
Gohir.D12G208800 Gossypium hirsutum HOM05D006137 ORTHO05D007697 2.8e-147 525.8 378 71.7
Duzib068G1414 Durio zibethinus HOM05D006137 ORTHO05D007697 1.1e-146 523.9 375 70.9
Thecc.03G309800 Theobroma cacao HOM05D006137 ORTHO05D007697 1.8e-146 523.1 382 71.7
Gorai.008G224300 Gossypium raimondii HOM05D006137 ORTHO05D007697 5.4e-146 521.5 378 71.2
CiPaw.11G098100 Carya illinoinensis HOM05D006137 ORTHO05D007697 1.0e-144 517.3 390 70.3
Gohir.A12G206400 Gossypium hirsutum HOM05D006137 ORTHO05D007697 2.9e-144 515.8 386 69.7
Potri.003G096600 Populus trichocarpa HOM05D006137 ORTHO05D007697 3.9e-144 515.4 375 73.1
MD06G1026400 Malus domestica HOM05D006137 ORTHO05D007697 3.3e-143 512.3 384 69.0
Dinv25255 Davidia involucrata HOM05D006137 ORTHO05D007697 4.7e-142 508.4 373 71.3
GSVIVG01013108001 Vitis vinifera HOM05D006137 ORTHO05D007697 2.3e-141 506.1 381 68.5
FvH4_5g23010 Fragaria vesca HOM05D006137 ORTHO05D007697 1.2e-140 503.8 321 75.7
RcHm_v2.0_Chr7g0211741 Rosa chinensis HOM05D006137 ORTHO05D007697 1.2e-140 503.8 321 74.8
FAN08G1929 Fragaria x ananassa HOM05D006137 ORTHO05D007697 2.6e-140 502.7 366 68.0
Sabra03G0065200 Salix brachista HOM05D006137 ORTHO05D007697 3.4e-140 502.3 307 79.5
COL.COLO4_16947 Corchorus olitorius HOM05D006137 ORTHO05D007697 2.2e-139 499.6 304 79.6
FAN18G2668 Fragaria x ananassa HOM05D006137 ORTHO05D007697 2.9e-139 499.2 303 78.5
MELO3C013825.2 Cucumis melo HOM05D006137 ORTHO05D007697 8.3e-139 497.7 384 67.4
FAN04G0555 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.1e-138 497.3 317 74.4
PGR042G0393 Punica granatum HOM05D006137 ORTHO05D007697 5.4e-138 495.0 385 65.7
CsaV3_3G001380 Cucumis sativus L. HOM05D006137 ORTHO05D007697 3.5e-137 492.3 377 67.9
FvH4_2g06760 Fragaria vesca HOM05D006137 ORTHO05D007697 6.0e-137 491.5 384 65.1
FAN13G2862 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.9e-135 486.5 383 64.2
FAN18G2637 Fragaria x ananassa HOM05D006137 ORTHO05D007697 2.5e-135 486.1 356 68.3
Glyma.01G014900 Glycine max HOM05D006137 ORTHO05D007697 1.2e-134 483.8 351 69.8
CSS0021967 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 1.6e-134 483.4 313 74.4
TAR629G2895 Trochodendron aralioides HOM05D006137 ORTHO05D007697 1.1e-133 480.7 382 65.4
VMungo1215G0535 Vigna mungo HOM05D006137 ORTHO05D007697 1.1e-133 480.7 346 69.1
TPR.G19427 Trifolium pratense HOM05D006137 ORTHO05D007697 6.8e-133 478.0 350 68.6
Medtr5g029550 Medicago truncatula HOM05D006137 ORTHO05D007697 8.9e-133 477.6 376 65.7
Phvul.002G137400 Phaseolus vulgaris HOM05D006137 ORTHO05D007697 1.2e-132 477.2 354 68.6
CSS0050317 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 2.6e-132 476.1 313 74.1
CANSAT21G0809 Cannabis sativa HOM05D006137 ORTHO05D007697 2.6e-132 476.1 379 65.4
Carub.0004s1719 Capsella rubella HOM05D006137 ORTHO05D007697 5.8e-132 474.9 385 67.0
AL4G31550 Arabidopsis lyrata HOM05D006137 ORTHO05D007697 9.8e-132 474.2 321 72.9
CANSAT21G0548 Cannabis sativa HOM05D006137 ORTHO05D007697 9.8e-132 474.2 390 64.9
Lalb_Chr09g0325501 Lupinus albus HOM05D006137 ORTHO05D007697 9.8e-132 474.2 315 73.0
arahy.Tifrunner.gnm1.ann1.3JZK2J Arachis hypogaea HOM05D006137 ORTHO05D007697 2.9e-131 472.6 317 72.6
arahy.Tifrunner.gnm1.ann1.J91B8N Arachis hypogaea HOM05D006137 ORTHO05D007697 2.9e-131 472.6 317 72.6
A04p26930 Brassica napus HOM05D006137 ORTHO05D007697 2.9e-131 472.6 315 73.7
C04p64320 Brassica napus HOM05D006137 ORTHO05D007697 2.9e-131 472.6 315 73.7
BraA04t18192Z Brassica rapa HOM05D006137 ORTHO05D007697 2.9e-131 472.6 315 74.0
Thhalv10016768m.g Eutrema salsugineum HOM05D006137 ORTHO05D007697 2.9e-131 472.6 366 68.0
BcaB06g28845 Brassica carinata HOM05D006137 ORTHO05D007697 4.9e-131 471.9 380 66.1
CARHR129650 Cardamine hirsuta HOM05D006137 ORTHO05D007697 4.9e-131 471.9 326 72.1
Lj3g0008594 Lotus japonicus HOM05D006137 ORTHO05D007697 4.9e-131 471.9 367 65.7
AT2G35500 Arabidopsis thaliana HOM05D006137 ORTHO05D007697 8.3e-131 471.1 386 65.3
BolC4t27919H Brassica oleracea HOM05D006137 ORTHO05D007697 2.4e-130 469.5 315 73.7
ClCG10G001310 Citrullus lanatus HOM05D006137 ORTHO05D007697 3.2e-130 469.2 444 59.0
Sp4g17720 Schrenkiella parvula HOM05D006137 ORTHO05D007697 5.4e-130 468.4 313 73.5
Nn3g19394 Nelumbo nucifera HOM05D006137 ORTHO05D007697 3.5e-129 465.7 344 68.6
BcaC02g07708 Brassica carinata HOM05D006137 ORTHO05D007697 3.9e-128 462.2 297 76.1
Hma1.2p1_1027F.1_g249480 Hydrangea macrophylla HOM05D006137 ORTHO05D007697 1.9e-127 459.9 390 63.8
Sed0022354 Sechium edule HOM05D006137 ORTHO05D007697 2.1e-126 456.4 324 70.7
Aqoxy2G03876 Aquilegia oxysepala HOM05D006137 ORTHO05D007697 1.4e-125 453.8 317 67.5
Rhsim11G0021000 Rhododendron simsii HOM05D006137 ORTHO05D007697 1.4e-125 453.8 393 61.8
Psat2g138120 Pisum sativum HOM05D006137 ORTHO05D007697 3.4e-124 449.1 362 65.2
ECA233G6209 Erigeron canadensis HOM05D006137 ORTHO05D007697 2.2e-123 446.4 371 60.4
PSO782G3150 Papaver somniferum HOM05D006137 ORTHO05D007697 1.1e-122 444.1 365 61.9
Cc08_g03270 Coffea canephora HOM05D006137 ORTHO05D007697 7.1e-122 441.4 315 67.3
HanXRQChr04g0098961 Helianthus annuus HOM05D006137 ORTHO05D007697 7.1e-122 441.4 388 60.3
EL10Ac2g03238 Beta vulgaris HOM05D006137 ORTHO05D007697 1.6e-121 440.3 301 72.1
DCAR_008226 Daucus carota HOM05D006137 ORTHO05D007697 2.1e-121 439.9 299 71.6
Peaxi162Scf00170g00615 Petunia axillaris HOM05D006137 ORTHO05D007697 6.0e-121 438.3 388 59.0
Nitab4.5_0002190g0020 Nicotiana tabacum HOM05D006137 ORTHO05D007697 3.0e-120 436.0 322 66.5
PSO063G4597 Papaver somniferum HOM05D006137 ORTHO05D007697 3.9e-120 435.6 373 60.1
THA.LOC104814417 Tarenaya hassleriana HOM05D006137 ORTHO05D007697 6.6e-120 434.9 334 67.1
FAN24G0436 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.1e-119 434.1 292 71.9
Oeu017078.1 Olea europaea HOM05D006137 ORTHO05D007697 1.1e-119 434.1 299 69.2
CAN.G726.20 Capsicum annuum HOM05D006137 ORTHO05D007697 2.5e-119 433.0 319 66.8
QL12p001513 Quercus lobata HOM05D006137 ORTHO05D007697 7.3e-119 431.4 298 71.8
Sopen08g024990 Solanum pennellii HOM05D006137 ORTHO05D007697 7.3e-119 431.4 390 58.7
Aa31LG9G15490 Aethionema arabicum HOM05D006137 ORTHO05D007697 2.1e-118 429.9 275 76.7
Solyc08g076410.4 Solanum lycopersicum HOM05D006137 ORTHO05D007697 2.8e-118 429.5 380 59.7
PGSC0003DMG400014792 Solanum tuberosum HOM05D006137 ORTHO05D007697 8.1e-118 427.9 380 59.5
Prupe.5G028300 Prunus persica HOM05D006137 ORTHO05D007697 1.4e-117 427.2 381 61.2
Sc24g0002950 Simmondsia chinensis HOM05D006137 ORTHO05D007697 2.4e-117 426.4 290 73.8
Ah.09g233490 Amaranthus hybridus HOM05D006137 ORTHO05D007697 6.8e-117 424.9 324 66.0
CDE06G2536 Ceratophyllum demersum HOM05D006137 ORTHO05D007697 2.9e-115 419.5 339 63.4
Eucgr.E00233 Eucalyptus grandis HOM05D006137 ORTHO05D007697 1.9e-114 416.8 300 69.7
Lsat_1_v5_gn_6_3681 Lactuca sativa HOM05D006137 ORTHO05D007697 1.9e-114 416.8 369 58.5
Os10g0577700 Oryza sativa ssp. japonica HOM05D006137 ORTHO05D007697 2.5e-111 406.4 310 62.9
vmacro08163 Vaccinium macrocarpon HOM05D006137 ORTHO05D007697 2.5e-111 406.4 272 73.5
HPP92_014848 Vanilla planifolia HOM05D006137 ORTHO05D007697 3.3e-111 406.0 316 61.7
MSTRG.24846 Avicennia marina HOM05D006137 ORTHO05D007697 2.1e-110 403.3 376 56.9
Migut.A01172 Erythranthe guttata HOM05D006137 ORTHO05D007697 3.6e-110 402.5 342 61.1
Nitab4.5_0003416g0030 Nicotiana tabacum HOM05D006137 ORTHO05D007697 6.2e-110 401.7 323 62.2
unitig_748.g7545 Utricularia gibba HOM05D006137 ORTHO05D007697 4.6e-105 385.6 380 53.4
Lj2A232T29 Lonicera japonica HOM05D006137 ORTHO05D007697 1.4e-101 374.0 327 60.6
Zm00001eb025030 Zea mays HOM05D006137 ORTHO05D007697 1.5e-100 370.5 310 58.1
ATR0829G218 Amborella trichopoda HOM05D006137 ORTHO05D007697 1.3e-99 367.5 277 64.3
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 6.4e-99 365.2 305 60.7
Oeu019613.1 Olea europaea HOM05D006137 ORTHO05D007697 2.1e-97 360.1 328 57.3
Haze_08142 Corylus avellana HOM05D006137 ORTHO05D007697 4.6e-97 359.0 524 44.1
FAN20G1935 Fragaria x ananassa HOM05D006137 ORTHO05D007697 4.3e-95 352.4 388 53.4
Oeu002327.1 Olea europaea HOM05D006137 ORTHO05D007697 4.8e-94 349.0 225 73.3
Oeu019614.1 Olea europaea HOM05D006137 ORTHO05D007697 1.1e-90 337.8 289 59.5
SEGI_14560 Sequoiadendron giganteum HOM05D006137 ORTHO05D007697 1.8e-88 330.5 366 48.4
Eucgr.E00231 Eucalyptus grandis HOM05D006137 ORTHO05D007697 9.6e-87 324.7 268 61.9
Mapoly0006s0263 Marchantia polymorpha HOM05D006137 ORTHO05D007697 4.2e-82 309.3 346 46.5
SMO228G0118 Selaginella moellendorffii HOM05D006137 ORTHO05D007697 1.1e-77 294.7 304 48.7
Manes.15G185701 Manihot esculenta HOM05D006137 ORTHO05D007697 5.0e-75 285.8 259 63.7
Pp3c12_17740 Physcomitrium patens HOM05D006137 ORTHO05D007697 2.0e-71 273.9 346 40.5
AagrBONN_evm.TU.Sc2ySwM_344.1996 Anthoceros agrestis HOM05D006137 ORTHO05D007697 4.3e-71 272.7 303 45.2
Ca_25185_v3 Cicer arietinum L. HOM05D006137 ORTHO05D007697 3.1e-69 266.5 179 72.1
Hund09822 Selenicereus undatus HOM05D006137 ORTHO05D007697 1.3e-62 244.6 153 78.4
AUR62002644 Chenopodium quinoa HOM05D006137 ORTHO05D007697 7.7e-60 235.3 204 59.8
Oeu033557.2 Olea europaea HOM05D006137 ORTHO05D007697 1.9e-50 204.1 192 54.2
C03p78000 Brassica napus HOM05D006137 ORTHO05D007697 1.4e-48 198.0 158 63.9
AUR62002645 Chenopodium quinoa HOM05D006137 ORTHO05D007697 4.8e-46 189.5 159 60.4
AUR62040998 Chenopodium quinoa HOM05D006137 ORTHO05D007697 4.1e-45 186.4 136 66.2
Hund09821 Selenicereus undatus HOM05D006137 ORTHO05D000006 9.1e-45 185.3 142 61.3
BolC1t02019H Brassica oleracea HOM05D006137 ORTHO05D007697 8.5e-43 178.7 160 61.2
BolC3t20061H Brassica oleracea HOM05D006137 ORTHO05D007697 7.5e-39 165.6 165 55.2
C01p20920 Brassica napus HOM05D006137 ORTHO05D007697 2.2e-38 164.1 165 56.4
Glyma.07G152633 Glycine max HOM05D006137 ORTHO05D007697 4.1e-37 159.8 112 67.9
CBR_g18978 Chara braunii HOM05D006137 ORTHO05D007697 1.2e-33 148.3 182 47.3
MCO11G470 Micromonas commoda HOM05D006137 ORTHO05D007697 2.1e-33 147.5 196 39.8
AUR62040999 Chenopodium quinoa HOM05D006137 ORTHO05D007697 5.9e-28 129.4 87 73.6
Medtr1g009450 Medicago truncatula HOM05D006137 ORTHO05D007697 5.0e-27 126.3 126 56.3
PRCOL_00002339 Prasinoderma coloniale HOM05D006137 ORTHO05D007697 6.8e-24 115.9 196 36.2
C02p41610 Brassica napus HOM05D006137 ORTHO05D007697 7.3e-10 69.3 36 83.3
BolC2t10179H Brassica oleracea HOM05D006137 ORTHO05D007697 7.3e-10 69.3 36 83.3
BcaC09g50780 Brassica carinata HOM05D006137 ORTHO05D007697 9.5e-10 68.9 97 44.3
BolC2t11174H Brassica oleracea HOM05D006137 ORTHO05D007697 2.3e-08 64.3 31 87.1
Mapoly0089s0033 Marchantia polymorpha HOM05D002058 ORTHO05D003758 1.2e-07 62.0 153 32.0
Mapoly0035s0139 Marchantia polymorpha HOM05D002058 ORTHO05D003758 3.4e-07 60.5 149 32.9
Cre16.g659850 Chlamydomonas reinhardtii HOM05D006137 ORTHO05D007697 4.4e-07 60.1 204 25.0
MCO12G135 Micromonas commoda HOM05D002058 ORTHO05D003758 9.9e-07 58.9 181 26.5


User provided reference genes

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