Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10001383m.g Citrus clementina HOM05D004239 ORTHO05D005191 3.9e-224 781.2 399 100.0
QL03p006503 Quercus lobata HOM05D004239 ORTHO05D005191 3.7e-166 588.6 377 79.3
Cpa.g.sc48.35 Carica papaya HOM05D004239 ORTHO05D005191 8.2e-166 587.4 376 78.5
Dinv40275 Davidia involucrata HOM05D004239 ORTHO05D005191 1.5e-164 583.2 384 77.9
Potri.005G035300 Populus trichocarpa HOM05D004239 ORTHO05D005191 2.6e-164 582.4 376 77.9
CiPaw.07G016500 Carya illinoinensis HOM05D004239 ORTHO05D005191 1.0e-163 580.5 377 78.5
Prupe.6G327600 Prunus persica HOM05D004239 ORTHO05D005191 1.1e-162 577.0 385 75.1
Manes.08G122300 Manihot esculenta HOM05D004239 ORTHO05D005191 3.2e-162 575.5 376 77.7
Cc00_g15600 Coffea canephora HOM05D004239 ORTHO05D005191 5.5e-162 574.7 377 77.2
Cfa006576 Carpinus fangiana HOM05D004239 ORTHO05D005191 2.1e-161 572.8 377 77.5
Potri.013G024000 Populus trichocarpa HOM05D004239 ORTHO05D005191 2.3e-160 569.3 376 76.6
TAR636G0428 Trochodendron aralioides HOM05D004239 ORTHO05D005191 3.0e-160 568.9 378 76.7
MD12G1220700 Malus domestica HOM05D004239 ORTHO05D005191 5.1e-160 568.2 376 76.6
Oeu027738.1 Olea europaea HOM05D004239 ORTHO05D005191 6.7e-160 567.8 377 76.1
GSVIVG01000037001 Vitis vinifera HOM05D004239 ORTHO05D005191 1.5e-159 566.6 376 76.3
Actinidia23624 Actinidia chinensis HOM05D004239 ORTHO05D005191 7.4e-159 564.3 380 75.0
RcHm_v2.0_Chr3g0454501 Rosa chinensis HOM05D004239 ORTHO05D005191 9.7e-159 563.9 377 74.8
CANSAT54G0620 Cannabis sativa HOM05D004239 ORTHO05D005191 1.3e-158 563.5 376 76.1
Manes.09G165700 Manihot esculenta HOM05D004239 ORTHO05D005191 1.3e-158 563.5 376 77.1
Peaxi162Scf00037g00226 Petunia axillaris HOM05D004239 ORTHO05D005191 1.3e-158 563.5 376 75.0
FvH4_6g05650 Fragaria vesca HOM05D004239 ORTHO05D005191 2.2e-158 562.8 377 74.5
Eucgr.B01993 Eucalyptus grandis HOM05D004239 ORTHO05D005191 2.8e-158 562.4 377 75.3
Haze_04207 Corylus avellana HOM05D004239 ORTHO05D005191 3.7e-158 562.0 377 76.9
Oeu038249.1 Olea europaea HOM05D004239 ORTHO05D005191 1.1e-157 560.5 377 75.3
MD04G1206900 Malus domestica HOM05D004239 ORTHO05D005191 1.2e-156 557.0 376 75.0
PGSC0003DMG401028586 Solanum tuberosum HOM05D004239 ORTHO05D005191 2.6e-156 555.8 388 71.4
Solyc01g098840.3 Solanum lycopersicum HOM05D004239 ORTHO05D005191 3.4e-156 555.4 388 71.9
Sopen01g042380 Solanum pennellii HOM05D004239 ORTHO05D005191 3.4e-156 555.4 388 71.6
SGA_v2.0_scaffold81G26082 Striga asiatica HOM05D004239 ORTHO05D005191 7.7e-156 554.3 386 72.0
Glyma.03G239000 Glycine max HOM05D004239 ORTHO05D005191 1.7e-155 553.1 376 73.4
Nitab4.5_0005388g0060 Nicotiana tabacum HOM05D004239 ORTHO05D005191 2.9e-155 552.4 376 73.9
CAN.G1077.21 Capsicum annuum HOM05D004239 ORTHO05D005191 3.8e-155 552.0 382 72.0
Sabra13G0025600 Salix brachista HOM05D004239 ORTHO05D005191 5.0e-155 551.6 394 72.1
Nitab4.5_0009323g0010 Nicotiana tabacum HOM05D004239 ORTHO05D005191 1.4e-154 550.1 377 72.9
Migut.N01997 Erythranthe guttata HOM05D004239 ORTHO05D005191 1.9e-154 549.7 377 74.0
Ca_09364_v3 Cicer arietinum L. HOM05D004239 ORTHO05D005191 3.2e-154 548.9 385 72.7
MSTRG.5107 Avicennia marina HOM05D004239 ORTHO05D005191 1.2e-153 547.0 376 73.7
Sed0006954 Sechium edule HOM05D004239 ORTHO05D005191 1.6e-153 546.6 388 70.6
Peaxi162Scf00471g00018 Petunia axillaris HOM05D004239 ORTHO05D005191 2.1e-153 546.2 377 72.4
Lalb_Chr04g0260811 Lupinus albus HOM05D004239 ORTHO05D005191 3.6e-153 545.4 377 72.7
CsaV3_2G005140 Cucumis sativus L. HOM05D004239 ORTHO05D005191 4.7e-153 545.0 385 71.4
Phvul.006G092900 Phaseolus vulgaris HOM05D004239 ORTHO05D005191 6.1e-153 544.7 376 73.4
MELO3C004278.2 Cucumis melo HOM05D004239 ORTHO05D005191 1.8e-152 543.1 385 71.2
Nn1g02198 Nelumbo nucifera HOM05D004239 ORTHO05D005191 6.7e-152 541.2 378 71.7
vmacro19629 Vaccinium macrocarpon HOM05D004239 ORTHO05D005191 8.8e-152 540.8 383 72.6
TWI36G1635 Tripterygium wilfordii HOM05D004239 ORTHO05D005191 1.5e-151 540.0 386 71.8
vmacro23128 Vaccinium macrocarpon HOM05D004239 ORTHO05D005191 1.5e-151 540.0 386 69.9
Rhsim05G0142700 Rhododendron simsii HOM05D004239 ORTHO05D005191 2.0e-151 539.7 383 72.6
Dinv23953 Davidia involucrata HOM05D004239 ORTHO05D005191 5.7e-151 538.1 355 76.9
VMungo0540G1286 Vigna mungo HOM05D004239 ORTHO05D005191 5.7e-151 538.1 376 72.9
ClCG02G015900 Citrullus lanatus HOM05D004239 ORTHO05D005191 9.7e-151 537.3 388 70.4
EL10Ac4g09340 Beta vulgaris HOM05D004239 ORTHO05D005191 1.3e-150 537.0 384 71.4
SalBow3G0110 Salvia bowleyana HOM05D004239 ORTHO05D005191 1.3e-150 537.0 386 70.7
Hund21687 Selenicereus undatus HOM05D004239 ORTHO05D005191 1.3e-150 537.0 376 73.4
FAN14G2823 Fragaria x ananassa HOM05D004239 ORTHO05D005191 8.2e-150 534.3 377 71.9
Medtr7g113660 Medicago truncatula HOM05D004239 ORTHO05D005191 8.2e-150 534.3 385 70.9
TPR.G33198 Trifolium pratense HOM05D004239 ORTHO05D005191 1.8e-149 533.1 389 70.7
Nn4g26228 Nelumbo nucifera HOM05D004239 ORTHO05D005191 4.1e-149 531.9 392 68.9
PSO063G4628 Papaver somniferum HOM05D004239 ORTHO05D005191 5.3e-149 531.6 386 69.9
Psat3g010600 Pisum sativum HOM05D004239 ORTHO05D005191 2.0e-148 529.6 385 70.6
TWI12G0310 Tripterygium wilfordii HOM05D004239 ORTHO05D005191 2.6e-148 529.3 385 70.1
Aqoxy2G03302 Aquilegia oxysepala HOM05D004239 ORTHO05D005191 5.9e-148 528.1 379 71.5
FAN05G5256 Fragaria x ananassa HOM05D004239 ORTHO05D005191 1.0e-147 527.3 377 71.4
CSS0041428 Camellia sinensis var. sinensis HOM05D004239 ORTHO05D005191 1.7e-147 526.6 384 72.4
DCAR_029425 Daucus carota HOM05D004239 ORTHO05D005191 1.7e-147 526.6 380 70.0
AUR62005132 Chenopodium quinoa HOM05D004239 ORTHO05D005191 2.2e-147 526.2 385 69.9
Lj9A25G19 Lonicera japonica HOM05D004239 ORTHO05D005191 3.8e-147 525.4 385 70.4
Lj9A26G17 Lonicera japonica HOM05D004239 ORTHO05D005191 3.8e-147 525.4 385 70.4
unitig_0.g2376 Utricularia gibba HOM05D004239 ORTHO05D005191 1.1e-146 523.9 382 70.7
Duzib106G0174 Durio zibethinus HOM05D004239 ORTHO05D005191 1.9e-146 523.1 384 68.5
Sed0007278 Sechium edule HOM05D004239 ORTHO05D005191 1.9e-146 523.1 377 71.4
BraA02t08839Z Brassica rapa HOM05D004239 ORTHO05D005191 1.6e-145 520.0 380 71.6
FAN14G1612 Fragaria x ananassa HOM05D004239 ORTHO05D005191 8.0e-145 517.7 409 66.3
FAN02G3565 Fragaria x ananassa HOM05D004239 ORTHO05D005191 1.0e-144 517.3 409 66.5
Aa31LG11G9210 Aethionema arabicum HOM05D004239 ORTHO05D005191 2.3e-144 516.2 379 71.0
A02p38630 Brassica napus HOM05D004239 ORTHO05D005191 6.7e-144 514.6 380 71.1
AUR62000841 Chenopodium quinoa HOM05D004239 ORTHO05D005191 6.7e-144 514.6 397 67.5
FAN09G3705 Fragaria x ananassa HOM05D004239 ORTHO05D005191 6.7e-144 514.6 409 66.3
arahy.Tifrunner.gnm1.ann1.VWT09S Arachis hypogaea HOM05D004239 ORTHO05D005191 2.0e-143 513.1 386 69.9
Gohir.A11G295900 Gossypium hirsutum HOM05D004239 ORTHO05D005191 2.6e-143 512.7 384 68.5
TAR365G0701 Trochodendron aralioides HOM05D004239 ORTHO05D005191 2.6e-143 512.7 348 75.0
C02p58120 Brassica napus HOM05D004239 ORTHO05D005191 5.7e-143 511.5 380 70.8
THA.LOC104802807 Tarenaya hassleriana HOM05D004239 ORTHO05D005191 1.7e-142 510.0 379 70.4
BraA09t36167Z Brassica rapa HOM05D004239 ORTHO05D005191 2.2e-142 509.6 379 70.4
Gohir.D11G311000 Gossypium hirsutum HOM05D004239 ORTHO05D005191 2.8e-142 509.2 384 68.0
FAN05G0638 Fragaria x ananassa HOM05D004239 ORTHO05D005191 4.8e-142 508.4 409 65.5
Gorai.007G342800 Gossypium raimondii HOM05D004239 ORTHO05D005191 4.8e-142 508.4 384 68.0
A09p05280 Brassica napus HOM05D004239 ORTHO05D005191 1.8e-141 506.5 379 69.9
BolC2t11880H Brassica oleracea HOM05D004239 ORTHO05D005191 1.8e-141 506.5 379 69.9
Thhalv10004396m.g Eutrema salsugineum HOM05D004239 ORTHO05D005191 3.1e-141 505.8 379 70.7
Lj1g0017751 Lotus japonicus HOM05D004239 ORTHO05D005191 4.1e-141 505.4 352 72.4
Sp2g20670 Schrenkiella parvula HOM05D004239 ORTHO05D005191 7.0e-141 504.6 379 70.2
Thecc.05G305000 Theobroma cacao HOM05D004239 ORTHO05D005191 9.1e-141 504.2 384 66.1
BcaB04g19671 Brassica carinata HOM05D004239 ORTHO05D005191 3.5e-140 502.3 381 69.8
C09p05760 Brassica napus HOM05D004239 ORTHO05D005191 3.5e-140 502.3 379 70.4
Sc09g0003220 Simmondsia chinensis HOM05D004239 ORTHO05D005191 1.3e-139 500.4 348 72.7
PGR083G1755 Punica granatum HOM05D004239 ORTHO05D005191 1.7e-139 500.0 377 67.9
arahy.Tifrunner.gnm1.ann1.5NK7V3 Arachis hypogaea HOM05D004239 ORTHO05D005191 5.0e-139 498.4 403 66.7
Lsat_1_v5_gn_4_139401 Lactuca sativa HOM05D004239 ORTHO05D005191 6.5e-139 498.0 385 68.1
BcaC04g23678 Brassica carinata HOM05D004239 ORTHO05D005191 1.1e-138 497.3 379 69.9
BolC9t53503H Brassica oleracea HOM05D004239 ORTHO05D005191 1.1e-138 497.3 379 69.9
ECA234G2741 Erigeron canadensis HOM05D004239 ORTHO05D005191 1.1e-138 497.3 388 67.3
HanXRQChr09g0259671 Helianthus annuus HOM05D004239 ORTHO05D005191 6.1e-137 491.5 379 67.0
Actinidia19795 Actinidia chinensis HOM05D004239 ORTHO05D005191 1.8e-136 490.0 354 71.5
Carub.0006s2508 Capsella rubella HOM05D004239 ORTHO05D005191 2.3e-136 489.6 379 69.1
AL6G39560 Arabidopsis lyrata HOM05D004239 ORTHO05D005191 3.0e-136 489.2 378 69.3
AT5G27450 Arabidopsis thaliana HOM05D004239 ORTHO05D005191 2.6e-135 486.1 378 69.0
CARHR186060 Cardamine hirsuta HOM05D004239 ORTHO05D005191 3.1e-133 479.2 379 67.3
BcaC03g17788 Brassica carinata HOM05D004239 ORTHO05D005191 1.4e-128 463.8 379 66.5
Glyma.19G236200 Glycine max HOM05D004239 ORTHO05D005191 2.6e-127 459.5 325 70.2
ClCG10G005450 Citrullus lanatus HOM05D004239 ORTHO05D005191 4.4e-127 458.8 387 62.8
ATR0561G047 Amborella trichopoda HOM05D004239 ORTHO05D005191 5.4e-125 451.8 376 63.0
Sed0017775 Sechium edule HOM05D004239 ORTHO05D005191 1.6e-124 450.3 398 61.1
SEGI_00819 Sequoiadendron giganteum HOM05D004239 ORTHO05D005191 2.1e-121 439.9 389 58.4
Zm00001eb209270 Zea mays HOM05D004239 ORTHO05D005191 1.4e-120 437.2 388 59.5
Lsat_1_v5_gn_2_64361 Lactuca sativa HOM05D004239 ORTHO05D005191 2.3e-120 436.4 402 58.2
Os10g0329300 Oryza sativa ssp. japonica HOM05D004239 ORTHO05D005191 9.8e-119 431.0 387 60.7
Zm00001eb209470 Zea mays HOM05D004239 ORTHO05D005191 2.9e-118 429.5 377 60.5
Gorai.007G296000 Gossypium raimondii HOM05D004239 ORTHO05D005191 2.4e-117 426.4 384 60.2
Nitab4.5_0002031g0070 Nicotiana tabacum HOM05D004239 ORTHO05D005191 4.3e-114 415.6 376 59.0
Gohir.D11G274300 Gossypium hirsutum HOM05D004239 ORTHO05D005191 2.9e-110 402.9 384 58.3
SHI18197 Sapria himalayana HOM05D004239 ORTHO05D005191 6.4e-110 401.7 394 55.1
MELO3C004281.2 Cucumis melo HOM05D004239 ORTHO05D005191 1.3e-102 377.5 271 69.7
CDE02G3721 Ceratophyllum demersum HOM05D004239 ORTHO05D005191 1.4e-101 374.0 290 62.1
Pp3c22_490 Physcomitrium patens HOM05D004239 ORTHO05D005191 5.4e-93 345.5 408 48.3
Mapoly0214s0007 Marchantia polymorpha HOM05D004239 ORTHO05D005191 1.4e-88 330.9 432 45.4
Actinidia05711 Actinidia chinensis HOM05D004239 ORTHO05D005191 5.4e-85 318.9 226 70.8
RcHm_v2.0_Chr7g0220931 Rosa chinensis HOM05D004239 ORTHO05D005191 6.6e-83 312.0 299 58.2
AagrBONN_evm.TU.Sc2ySwM_368.2263 Anthoceros agrestis HOM05D004239 ORTHO05D005191 2.8e-81 306.6 371 47.7
HPP92_020860 Vanilla planifolia HOM05D004239 ORTHO05D005191 9.9e-79 298.1 265 58.1
SMO347G0436 Selaginella moellendorffii HOM05D004239 ORTHO05D005191 2.1e-73 280.4 380 42.1
CSS0049885 Camellia sinensis var. sinensis HOM05D004239 ORTHO05D005191 2.5e-61 240.4 180 66.7
CBR_g3053 Chara braunii HOM05D004239 ORTHO05D005191 5.5e-61 239.2 466 36.5
Nitab4.5_0000327g0030 Nicotiana tabacum HOM05D004239 ORTHO05D005191 6.5e-54 215.7 142 76.8
Cfa007056 Carpinus fangiana HOM05D004239 ORTHO05D005191 7.2e-53 212.2 152 76.3
SMO167G0025 Selaginella moellendorffii HOM05D004239 ORTHO05D005191 2.5e-50 203.8 237 46.4
vmacro05023 Vaccinium macrocarpon HOM05D004239 ORTHO05D005191 4.8e-41 172.9 178 57.3
RcHm_v2.0_Chr3g0454481 Rosa chinensis HOM05D004239 ORTHO05D005191 5.0e-38 162.9 117 70.9
Cfa027123 Carpinus fangiana HOM05D004239 ORTHO05D005191 4.1e-32 143.3 380 29.7
Zm00001eb063950 Zea mays HOM05D004239 ORTHO05D005191 3.2e-29 133.7 174 46.6
Lj5A557G19 Lonicera japonica HOM05D004239 ORTHO05D005191 8.0e-28 129.0 149 52.3
COL.COLO4_16926 Corchorus olitorius HOM05D004239 ORTHO05D005191 3.0e-27 127.1 108 61.1
RcHm_v2.0_Chr7g0220941 Rosa chinensis HOM05D004239 ORTHO05D005191 8.8e-27 125.6 78 80.8
Lj5A557T20 Lonicera japonica HOM05D004239 ORTHO05D005191 1.7e-25 121.3 155 50.3
Actinidia05710 Actinidia chinensis HOM05D004239 ORTHO05D005191 1.8e-24 117.9 71 80.3
AagrBONN_evm.TU.Sc2ySwM_117.3520 Anthoceros agrestis HOM05D004239 ORTHO05D005191 1.2e-23 115.2 208 38.5
Lj5A555G9 Lonicera japonica HOM05D004239 ORTHO05D005191 1.2e-23 115.2 138 52.9
Lj5A556G14 Lonicera japonica HOM05D004239 ORTHO05D005191 2.9e-22 110.5 120 55.0
Lj5A549T14 Lonicera japonica HOM05D004239 ORTHO05D005191 8.8e-19 99.0 126 51.6
Lj5A558T16 Lonicera japonica HOM05D004239 ORTHO05D005191 1.2e-18 98.6 126 50.8
Lsat_1_v5_gn_7_76161 Lactuca sativa HOM05D004239 ORTHO05D005191 3.4e-18 97.1 99 52.5
Lj5A558T15 Lonicera japonica HOM05D004239 ORTHO05D005191 4.4e-18 96.7 81 60.5
Lj5A552G14 Lonicera japonica HOM05D004239 ORTHO05D005191 4.1e-16 90.1 82 57.3
Lj5A550T6 Lonicera japonica HOM05D004239 ORTHO05D005191 2.7e-15 87.4 125 46.4
Zm00001eb193770 Zea mays HOM05D004239 ORTHO05D445176 8.5e-14 82.4 79 53.2
Zm00001eb252600 Zea mays HOM05D004239 ORTHO05D005191 5.5e-13 79.7 106 45.3
CiPaw.07G016300 Carya illinoinensis HOM05D006625 ORTHO05D008060 4.7e-12 76.6 97 51.5
Zm00001eb313220 Zea mays HOM05D004239 ORTHO05D005191 1.8e-11 74.7 81 53.1
Potri.015G125201 Populus trichocarpa HOM05D004239 ORTHO05D005191 5.2e-11 73.2 48 66.7
COL.COLO4_16925 Corchorus olitorius HOM05D004239 ORTHO05D005191 2.0e-10 71.2 47 63.8
Oeu038248.1 Olea europaea HOM05D004239 ORTHO05D288322 2.0e-10 71.2 42 83.3
Zm00001eb342830 Zea mays HOM05D004239 ORTHO05D005191 1.6e-07 61.6 38 81.6
RcHm_v2.0_Chr3g0454471 Rosa chinensis HOM05D004239 ORTHO05D005191 2.0e-07 61.2 36 80.6
Zm00001eb019540 Zea mays HOM05D000931 ORTHO05D001924 1.0e-06 58.9 38 76.3
arahy.Tifrunner.gnm1.ann1.04YHM3 Arachis hypogaea HOM05D004239 ORTHO05D005191 2.3e-06 57.8 100 41.0


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