Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10000799m.g Citrus clementina HOM05D006698 ORTHO05D008415 0.0e+00 1104.0 540 100.0
TWI12G1415 Tripterygium wilfordii HOM05D006698 ORTHO05D008415 2.4e-221 772.3 540 68.0
GSVIVG01009862001 Vitis vinifera HOM05D006698 ORTHO05D008415 1.2e-220 770.0 540 67.4
QL02p011012 Quercus lobata HOM05D006698 ORTHO05D008415 2.1e-220 769.2 542 68.8
Cfa013924 Carpinus fangiana HOM05D006698 ORTHO05D008415 1.3e-219 766.5 540 67.4
Prupe.1G368700 Prunus persica HOM05D006698 ORTHO05D008415 2.3e-219 765.8 540 67.2
Haze_22605 Corylus avellana HOM05D006698 ORTHO05D008415 9.5e-218 760.4 567 65.4
Potri.005G236400 Populus trichocarpa HOM05D006698 ORTHO05D008415 1.2e-217 760.0 542 67.7
Thecc.08G041000 Theobroma cacao HOM05D006698 ORTHO05D008415 6.2e-217 757.7 540 67.2
CiPaw.09G133200 Carya illinoinensis HOM05D006698 ORTHO05D008415 1.2e-215 753.4 540 66.3
Duzib093G0690 Durio zibethinus HOM05D006698 ORTHO05D008415 3.8e-214 748.4 540 67.8
Sabra05G0182800 Salix brachista HOM05D006698 ORTHO05D008415 2.7e-212 742.3 542 66.4
THA.LOC104823101 Tarenaya hassleriana HOM05D006698 ORTHO05D008415 7.3e-210 734.2 540 66.1
Cpa.g.sc14.105 Carica papaya HOM05D006698 ORTHO05D008415 9.6e-210 733.8 543 66.1
Gorai.002G124600 Gossypium raimondii HOM05D006698 ORTHO05D008415 1.1e-208 730.3 540 65.4
Gohir.D01G099300 Gossypium hirsutum HOM05D006698 ORTHO05D008415 2.4e-208 729.2 540 65.2
TAR628G0086 Trochodendron aralioides HOM05D006698 ORTHO05D008415 1.7e-206 723.0 544 65.6
Gohir.A01G112500 Gossypium hirsutum HOM05D006698 ORTHO05D008415 6.4e-206 721.1 540 64.6
MD09G1232000 Malus domestica HOM05D006698 ORTHO05D008415 2.4e-205 719.2 542 63.7
Atru.chr13.326 Acer truncatum HOM05D006698 ORTHO05D008415 3.5e-204 715.3 471 73.5
CsaV3_3G045670 Cucumis sativus L. HOM05D006698 ORTHO05D008415 8.7e-203 710.7 540 61.9
FAN27G1564 Fragaria x ananassa HOM05D006698 ORTHO05D008415 8.7e-203 710.7 540 62.0
MELO3C003770.2 Cucumis melo HOM05D006698 ORTHO05D008415 1.3e-201 706.8 540 61.3
FAN15G2932 Fragaria x ananassa HOM05D006698 ORTHO05D008415 4.8e-201 704.9 540 61.3
FvH4_2g38790 Fragaria vesca HOM05D006698 ORTHO05D008415 8.1e-201 704.1 540 61.7
CSS0038613 Camellia sinensis var. sinensis HOM05D006698 ORTHO05D008415 2.4e-200 702.6 540 63.0
Nn6g32301 Nelumbo nucifera HOM05D006698 ORTHO05D008415 3.1e-200 702.2 540 63.7
RcHm_v2.0_Chr6g0302501 Rosa chinensis HOM05D006698 ORTHO05D008415 9.0e-200 700.7 541 62.1
A04p12330 Brassica napus HOM05D006698 ORTHO05D008415 5.8e-199 698.0 542 60.9
BraA04t16897Z Brassica rapa HOM05D006698 ORTHO05D008415 5.8e-199 698.0 542 61.1
Eucgr.F01632 Eucalyptus grandis HOM05D006698 ORTHO05D008415 2.2e-198 696.0 542 61.1
Sed0002694 Sechium edule HOM05D006698 ORTHO05D008415 1.4e-197 693.3 541 61.4
Lj1g0011928 Lotus japonicus HOM05D006698 ORTHO05D008415 1.8e-195 686.4 544 61.6
CARHR262700 Cardamine hirsuta HOM05D006698 ORTHO05D008415 3.0e-195 685.6 542 59.6
C04p46000 Brassica napus HOM05D006698 ORTHO05D008415 3.3e-194 682.2 542 60.0
BolC4t26182H Brassica oleracea HOM05D006698 ORTHO05D008415 3.3e-194 682.2 542 60.0
Lj4A795T33 Lonicera japonica HOM05D006698 ORTHO05D008415 1.6e-193 679.9 540 60.7
Sp7g02400 Schrenkiella parvula HOM05D006698 ORTHO05D008415 2.8e-193 679.1 542 60.3
AL7G50720 Arabidopsis lyrata HOM05D006698 ORTHO05D008415 6.2e-193 677.9 543 59.5
Carub.0007s3635 Capsella rubella HOM05D006698 ORTHO05D008415 8.1e-193 677.6 543 59.5
AT5G39590 Arabidopsis thaliana HOM05D006698 ORTHO05D008415 1.4e-192 676.8 543 59.3
PGR083G1075 Punica granatum HOM05D006698 ORTHO05D008415 2.4e-192 676.0 545 61.7
Aqoxy5G01450 Aquilegia oxysepala HOM05D006698 ORTHO05D008415 4.0e-192 675.2 540 59.8
CANSAT35G1394 Cannabis sativa HOM05D006698 ORTHO05D008415 2.6e-191 672.5 543 60.8
Glyma.04G215400 Glycine max HOM05D006698 ORTHO05D008415 7.6e-191 671.0 543 60.6
Oeu027550.1 Olea europaea HOM05D006698 ORTHO05D008415 2.9e-190 669.1 542 60.9
Rhsim06G0023700 Rhododendron simsii HOM05D006698 ORTHO05D008415 1.4e-189 666.8 541 60.8
arahy.Tifrunner.gnm1.ann1.32JQZQ Arachis hypogaea HOM05D006698 ORTHO05D008415 3.0e-187 659.1 542 59.2
Lalb_Chr08g0238541 Lupinus albus HOM05D006698 ORTHO05D008415 3.0e-187 659.1 542 60.3
Ca_16921_v3 Cicer arietinum L. HOM05D006698 ORTHO05D008415 5.1e-187 658.3 541 58.4
MSTRG.22331 Avicennia marina HOM05D006698 ORTHO05D008415 4.3e-186 655.2 542 58.5
Hund24100 Selenicereus undatus HOM05D006698 ORTHO05D008415 4.3e-186 655.2 541 59.5
arahy.Tifrunner.gnm1.ann1.HU0S2W Arachis hypogaea HOM05D006698 ORTHO05D008415 7.4e-186 654.4 542 58.9
EL10Ac1g02260 Beta vulgaris HOM05D006698 ORTHO05D008415 2.8e-185 652.5 542 57.9
Aa31LG9G16490 Aethionema arabicum HOM05D006698 ORTHO05D008415 8.2e-185 651.0 573 55.1
PSO170G5361 Papaver somniferum HOM05D006698 ORTHO05D008415 1.1e-184 650.6 542 57.7
Ah.11g039450 Amaranthus hybridus HOM05D006698 ORTHO05D008415 4.0e-184 648.7 540 57.8
TPR.G18731 Trifolium pratense HOM05D006698 ORTHO05D008415 5.3e-184 648.3 541 56.9
AUR62035724 Chenopodium quinoa HOM05D006698 ORTHO05D008415 1.2e-183 647.1 540 55.7
FAN20G0171 Fragaria x ananassa HOM05D006698 ORTHO05D008415 2.6e-183 646.0 633 51.8
Migut.N03146 Erythranthe guttata HOM05D006698 ORTHO05D008415 3.4e-183 645.6 542 57.0
Sopen04g034840 Solanum pennellii HOM05D006698 ORTHO05D008415 4.5e-183 645.2 541 59.3
Phvul.009G147800 Phaseolus vulgaris HOM05D006698 ORTHO05D008415 5.8e-183 644.8 543 58.6
PSO210G5790 Papaver somniferum HOM05D006698 ORTHO05D008415 1.3e-182 643.7 542 57.4
PGSC0003DMG400003770 Solanum tuberosum HOM05D006698 ORTHO05D008415 1.3e-182 643.7 541 59.3
Solyc04g081230.3 Solanum lycopersicum HOM05D006698 ORTHO05D008415 6.5e-182 641.3 540 59.1
Manes.18G015700 Manihot esculenta HOM05D006698 ORTHO05D008415 3.2e-181 639.0 429 73.7
VMungo1309G0200 Vigna mungo HOM05D006698 ORTHO05D008415 9.3e-181 637.5 543 57.8
Thhalv10027724m.g Eutrema salsugineum HOM05D006698 ORTHO05D008415 1.2e-180 637.1 541 56.9
SGA_v2.0_scaffold47G17495 Striga asiatica HOM05D006698 ORTHO05D008415 1.2e-180 637.1 541 57.3
DCAR_009935 Daucus carota HOM05D006698 ORTHO05D008415 1.8e-179 633.3 540 57.8
ClCG05G018510 Citrullus lanatus HOM05D006698 ORTHO05D008415 5.1e-179 631.7 540 57.0
Medtr3g095660 Medicago truncatula HOM05D006698 ORTHO05D008415 1.1e-178 630.6 541 56.2
ECA238G1455 Erigeron canadensis HOM05D006698 ORTHO05D008415 3.3e-178 629.0 536 57.3
Peaxi162Scf00287g01719 Petunia axillaris HOM05D006698 ORTHO05D008415 7.4e-178 627.9 542 59.2
PSO170G6283 Papaver somniferum HOM05D006698 ORTHO05D008415 1.6e-177 626.7 548 56.0
HanXRQChr04g0101141 Helianthus annuus HOM05D006698 ORTHO05D008415 2.8e-177 625.9 540 57.0
PSO210G1198 Papaver somniferum HOM05D006698 ORTHO05D008415 4.8e-177 625.2 548 56.0
CAN.G1271.13 Capsicum annuum HOM05D006698 ORTHO05D008415 1.8e-176 623.2 541 57.3
vmacro21711 Vaccinium macrocarpon HOM05D006698 ORTHO05D008415 2.4e-176 622.9 563 55.8
Oeu027551.1 Olea europaea HOM05D006698 ORTHO05D008415 5.3e-176 621.7 491 60.9
MBI09_g13764_MAGBIO Magnolia biondii HOM05D006698 ORTHO05D008415 1.2e-175 620.5 544 58.1
Lsat_1_v5_gn_2_11660 Lactuca sativa HOM05D006698 ORTHO05D008415 1.1e-173 614.0 536 56.5
BcaB06g27346 Brassica carinata HOM05D006698 ORTHO05D008415 9.3e-173 610.9 542 55.4
Nitab4.5_0001988g0020 Nicotiana tabacum HOM05D006698 ORTHO05D008415 6.9e-168 594.7 489 58.5
Cc10_g01920 Coffea canephora HOM05D006698 ORTHO05D008415 1.5e-167 593.6 602 51.8
SalBow8G5338 Salvia bowleyana HOM05D006698 ORTHO05D008415 5.5e-165 585.1 592 51.0
SHI08084 Sapria himalayana HOM05D006698 ORTHO05D008415 3.3e-162 575.9 559 54.0
AUR62035437 Chenopodium quinoa HOM05D006698 ORTHO05D008415 8.2e-161 571.2 460 56.3
Actinidia16966 Actinidia chinensis HOM05D006698 ORTHO05D008415 1.1e-152 544.3 447 59.1
HPP92_014935 Vanilla planifolia HOM05D006698 ORTHO05D008415 5.3e-152 542.0 543 50.8
Psat5g063280 Pisum sativum HOM05D006698 ORTHO05D008415 1.0e-147 527.7 471 53.7
CDE09G0091 Ceratophyllum demersum HOM05D006698 ORTHO05D008415 1.6e-143 513.8 469 54.6
Dinv31825 Davidia involucrata HOM05D006698 ORTHO05D008415 1.0e-142 511.1 540 51.3
ATR0147G003 Amborella trichopoda HOM05D006698 ORTHO05D008415 1.7e-142 510.4 553 48.8
Os04g0663700 Oryza sativa ssp. japonica HOM05D006698 ORTHO05D008415 1.5e-141 507.3 553 49.2
Zm00001eb067290 Zea mays HOM05D006698 ORTHO05D008415 3.0e-139 499.6 558 49.3
Potri.002G025032 Populus trichocarpa HOM05D006698 ORTHO05D008415 1.9e-125 453.8 311 70.4
Sc15g0005110 Simmondsia chinensis HOM05D006698 ORTHO05D008415 3.0e-123 446.4 400 55.0
SEGI_26467 Sequoiadendron giganteum HOM05D006698 ORTHO05D008415 7.8e-119 431.8 492 45.7
Pp3c16_7090 Physcomitrium patens HOM05D006698 ORTHO05D008415 1.3e-97 361.3 532 36.7
Pp3c5_11350 Physcomitrium patens HOM05D006698 ORTHO05D008415 9.6e-93 345.1 560 35.7
Mapoly0043s0042 Marchantia polymorpha HOM05D006698 ORTHO05D008415 1.8e-83 314.3 576 35.6
AagrBONN_evm.TU.Sc2ySwM_344.812 Anthoceros agrestis HOM05D006698 ORTHO05D008415 1.5e-82 311.2 579 36.1
SMO145G0265 Selaginella moellendorffii HOM05D006698 ORTHO05D008415 2.0e-82 310.8 479 38.0
unitig_27.g25099 Utricularia gibba HOM05D006698 ORTHO05D008415 6.4e-81 305.8 223 65.5
AagrBONN_evm.TU.Sc2ySwM_344.842 Anthoceros agrestis HOM05D006698 ORTHO05D008415 8.4e-81 305.4 571 35.7
Glyma.06G150801 Glycine max HOM05D006698 ORTHO05D008415 9.0e-67 258.8 209 59.8
Potri.002G024966 Populus trichocarpa HOM05D006698 ORTHO05D008415 1.0e-62 245.4 215 59.1
unitig_27.g25098 Utricularia gibba HOM05D006698 ORTHO05D008415 4.6e-55 219.9 257 44.4
QL03p018220 Quercus lobata HOM05D006698 ORTHO05D008415 1.7e-41 174.9 109 74.3
QL03p018243 Quercus lobata HOM05D006698 ORTHO05D008415 5.9e-34 149.8 197 44.2
Actinidia16965 Actinidia chinensis HOM05D006698 ORTHO05D008415 1.1e-27 129.0 76 78.9
HanXRQChr05g0147331 Helianthus annuus HOM05D006698 ORTHO05D008415 2.4e-27 127.9 119 46.2
Medtr7g098720 Medicago truncatula HOM05D006698 ORTHO05D008415 5.2e-22 110.2 125 44.8
Cpa.g.sc14.104 Carica papaya HOM05D006698 ORTHO05D008415 4.8e-20 103.6 99 56.6
Oeu046256.1 Olea europaea HOM05D006698 ORTHO05D008415 2.9e-17 94.4 60 66.7
MBI06_g37498_MAGBIO Magnolia biondii HOM05D002910 ORTHO05D030039 9.5e-08 62.8 85 41.2
Duzib116G0861 Durio zibethinus HOM05D006698 ORTHO05D008415 1.2e-07 62.4 57 54.4
Glyma.19G197300 Glycine max HOM05D006431 ORTHO05D007918 2.8e-07 61.2 129 28.7
Glyma.03G199700 Glycine max HOM05D006431 ORTHO05D007918 6.1e-07 60.1 129 27.9
Phvul.001G193600 Phaseolus vulgaris HOM05D006431 ORTHO05D007918 8.0e-07 59.7 129 27.1
ATR0772G016 Amborella trichopoda HOM05D006431 ORTHO05D007918 1.0e-06 59.3 209 24.4
Aqoxy2G01023 Aquilegia oxysepala HOM05D006431 ORTHO05D007918 8.9e-06 56.2 209 24.4


User provided reference genes

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