Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.16G107900 Carya illinoinensis HOM05D007038 ORTHO05D008893 5.5e-212 740.7 378 100.0
QL02p093776 Quercus lobata HOM05D007038 ORTHO05D008893 4.1e-159 565.1 377 78.2
Cfa020806 Carpinus fangiana HOM05D007038 ORTHO05D008893 3.9e-157 558.5 378 78.6
RcHm_v2.0_Chr2g0085451 Rosa chinensis HOM05D007038 ORTHO05D008893 5.2e-138 495.0 378 68.5
Manes.06G033300 Manihot esculenta HOM05D007038 ORTHO05D008893 8.9e-138 494.2 369 71.3
MD15G1150700 Malus domestica HOM05D007038 ORTHO05D008893 1.7e-136 490.0 383 69.5
Dinv42838 Davidia involucrata HOM05D007038 ORTHO05D008893 1.2e-134 483.8 374 67.4
GSVIVG01023636001 Vitis vinifera HOM05D007038 ORTHO05D008893 3.9e-133 478.8 368 69.0
FvH4_1g00730 Fragaria vesca HOM05D007038 ORTHO05D008893 5.1e-133 478.4 365 68.8
Prupe.7G265000 Prunus persica HOM05D007038 ORTHO05D008893 5.1e-133 478.4 382 67.0
Atru.chr7.996 Acer truncatum HOM05D007038 ORTHO05D008893 1.1e-132 477.2 374 68.7
FAN28G0561 Fragaria x ananassa HOM05D007038 ORTHO05D008893 8.1e-131 471.1 386 66.1
TWI63G0746 Tripterygium wilfordii HOM05D007038 ORTHO05D008893 2.4e-130 469.5 377 65.8
CSS0015539 Camellia sinensis var. sinensis HOM05D007038 ORTHO05D008893 2.0e-129 466.5 380 66.3
FAN23G2273 Fragaria x ananassa HOM05D007038 ORTHO05D008893 2.9e-128 462.6 392 64.0
Gohir.A13G206700 Gossypium hirsutum HOM05D007038 ORTHO05D008893 2.9e-128 462.6 375 63.2
Gorai.013G241400 Gossypium raimondii HOM05D007038 ORTHO05D008893 8.4e-128 461.1 375 62.9
FAN23G1724 Fragaria x ananassa HOM05D007038 ORTHO05D008893 7.1e-127 458.0 397 63.2
Dinv43261 Davidia involucrata HOM05D007038 ORTHO05D008893 9.3e-127 457.6 361 66.5
CSS0013222 Camellia sinensis var. sinensis HOM05D007038 ORTHO05D008893 6.0e-126 454.9 379 65.4
Sed0007561 Sechium edule HOM05D007038 ORTHO05D008893 1.3e-125 453.8 367 64.6
CANSAT11G2324 Cannabis sativa HOM05D007038 ORTHO05D008893 1.7e-125 453.4 348 67.5
Actinidia23561 Actinidia chinensis HOM05D007038 ORTHO05D008893 5.1e-125 451.8 373 65.7
arahy.Tifrunner.gnm1.ann1.2821YK Arachis hypogaea HOM05D007038 ORTHO05D008893 5.1e-125 451.8 364 64.8
TAR626G0465 Trochodendron aralioides HOM05D007038 ORTHO05D008893 5.1e-125 451.8 359 66.3
Haze_19163 Corylus avellana HOM05D007038 ORTHO05D008893 6.6e-125 451.4 401 64.3
Lj4g0021787 Lotus japonicus HOM05D007038 ORTHO05D008893 6.6e-125 451.4 377 63.7
arahy.Tifrunner.gnm1.ann1.ULM9BE Arachis hypogaea HOM05D007038 ORTHO05D008893 1.9e-124 449.9 364 64.8
Medtr4g130580 Medicago truncatula HOM05D007038 ORTHO05D008893 1.9e-124 449.9 371 63.3
Glyma.02G205400 Glycine max HOM05D007038 ORTHO05D008893 7.3e-124 448.0 374 62.3
VMungo1215G2991 Vigna mungo HOM05D007038 ORTHO05D008893 1.3e-123 447.2 374 62.3
TPR.G24832 Trifolium pratense HOM05D007038 ORTHO05D008893 3.6e-123 445.7 370 62.7
Glyma.17G072600 Glycine max HOM05D007038 ORTHO05D008893 8.1e-123 444.5 377 62.6
Lj9A719G52 Lonicera japonica HOM05D007038 ORTHO05D008893 1.3e-117 427.2 365 64.4
Lalb_Chr13g0300771 Lupinus albus HOM05D007038 ORTHO05D008893 6.7e-117 424.9 364 61.8
Nn8g39966 Nelumbo nucifera HOM05D007038 ORTHO05D008893 1.1e-116 424.1 361 62.3
ClCG02G014390 Citrullus lanatus HOM05D007038 ORTHO05D008893 1.5e-116 423.7 396 58.6
PGR102G3121 Punica granatum HOM05D007038 ORTHO05D008893 1.9e-116 423.3 376 60.6
Sabra06G0139000 Salix brachista HOM05D007038 ORTHO05D008893 1.8e-114 416.8 470 51.9
Cpa.g.sc46.174 Carica papaya HOM05D007038 ORTHO05D008893 4.0e-114 415.6 370 62.4
Psat0s3930g0120 Pisum sativum HOM05D007038 ORTHO05D008893 1.4e-111 407.1 350 62.3
ECA234G0501 Erigeron canadensis HOM05D007038 ORTHO05D008893 3.2e-111 406.0 384 59.1
Sopen07g001900 Solanum pennellii HOM05D007038 ORTHO05D008893 4.2e-111 405.6 395 54.9
Rhsim03G0258100 Rhododendron simsii HOM05D007038 ORTHO05D008893 9.3e-111 404.4 416 55.5
PGSC0003DMG400011195 Solanum tuberosum HOM05D007038 ORTHO05D008893 2.3e-109 399.8 414 52.7
Eucgr.C02504 Eucalyptus grandis HOM05D007038 ORTHO05D008893 3.0e-109 399.4 363 60.6
Sc14g0000940 Simmondsia chinensis HOM05D007038 ORTHO05D008893 2.5e-108 396.4 365 57.5
Duzib150G1077 Durio zibethinus HOM05D007038 ORTHO05D008893 1.4e-106 390.6 375 56.3
C02p13780 Brassica napus HOM05D007038 ORTHO05D008893 1.3e-104 384.0 362 55.2
BolC2t07497H Brassica oleracea HOM05D007038 ORTHO05D008893 1.3e-104 384.0 362 55.2
FAN26G1014 Fragaria x ananassa HOM05D007038 ORTHO05D008893 2.2e-104 383.3 368 58.2
THA.LOC104811831 Tarenaya hassleriana HOM05D007038 ORTHO05D008893 2.2e-104 383.3 359 57.1
Thhalv10015603m.g Eutrema salsugineum HOM05D007038 ORTHO05D008893 7.1e-103 378.3 363 54.8
CARHR271660 Cardamine hirsuta HOM05D007038 ORTHO05D008893 6.0e-102 375.2 381 54.3
Migut.J01371 Erythranthe guttata HOM05D007038 ORTHO05D008893 6.0e-102 375.2 337 59.1
Lsat_1_v5_gn_5_89520 Lactuca sativa HOM05D007038 ORTHO05D008893 7.9e-102 374.8 387 54.8
AL8G33930 Arabidopsis lyrata HOM05D007038 ORTHO05D008893 1.3e-101 374.0 372 54.0
Carub.0008s1841 Capsella rubella HOM05D007038 ORTHO05D008893 1.9e-100 370.2 374 53.5
EL10Ac8g18937 Beta vulgaris HOM05D007038 ORTHO05D008893 2.5e-100 369.8 370 54.6
HanXRQChr16g0520471 Helianthus annuus HOM05D007038 ORTHO05D008893 5.7e-100 368.6 443 48.5
Aqoxy7G03364 Aquilegia oxysepala HOM05D007038 ORTHO05D008893 1.1e-98 364.4 349 57.6
AT5G57880 Arabidopsis thaliana HOM05D007038 ORTHO05D008893 3.1e-98 362.8 371 52.0
PSO063G4531 Papaver somniferum HOM05D007038 ORTHO05D008893 4.1e-98 362.5 365 54.2
Phvul.003G155000 Phaseolus vulgaris HOM05D007038 ORTHO05D008893 5.3e-98 362.1 317 59.6
DCAR_019405 Daucus carota HOM05D007038 ORTHO05D008893 2.9e-96 356.3 319 58.9
BcaC04g19921 Brassica carinata HOM05D007038 ORTHO05D008893 3.8e-96 355.9 417 49.9
Ciclev10009099m.g Citrus clementina HOM05D007038 ORTHO05D008893 6.5e-96 355.1 284 68.0
A10p15240 Brassica napus HOM05D007038 ORTHO05D008893 1.4e-95 354.0 399 50.1
Aa31LG3G13710 Aethionema arabicum HOM05D007038 ORTHO05D008893 1.9e-95 353.6 378 51.9
Hund08926 Selenicereus undatus HOM05D007038 ORTHO05D008893 1.9e-95 353.6 407 50.4
BcaB05g22382 Brassica carinata HOM05D007038 ORTHO05D008893 6.1e-94 348.6 386 50.8
Thecc.09G151200 Theobroma cacao HOM05D007038 ORTHO05D008893 3.0e-93 346.3 294 61.9
A02p08130 Brassica napus HOM05D007038 ORTHO05D008893 1.5e-92 344.0 365 51.5
Cc06_g14750 Coffea canephora HOM05D007038 ORTHO05D008893 1.5e-92 344.0 325 56.0
BraA02t05887Z Brassica rapa HOM05D007038 ORTHO05D008893 3.3e-92 342.8 363 51.8
SalBow1G2783 Salvia bowleyana HOM05D007038 ORTHO05D008893 4.3e-92 342.4 386 50.8
C09p49760 Brassica napus HOM05D007038 ORTHO05D008893 5.3e-90 335.5 390 48.7
BraA10t43606Z Brassica rapa HOM05D007038 ORTHO05D008893 5.9e-89 332.0 391 49.4
Ca_21139_v3 Cicer arietinum L. HOM05D007038 ORTHO05D008893 5.0e-88 328.9 310 58.4
Ca_21144_v3 Cicer arietinum L. HOM05D007038 ORTHO05D008893 5.0e-88 328.9 310 58.4
Nitab4.5_0002724g0040 Nicotiana tabacum HOM05D007038 ORTHO05D008893 1.6e-86 323.9 413 46.2
vmacro06062 Vaccinium macrocarpon HOM05D007038 ORTHO05D008893 1.6e-86 323.9 348 52.9
HanXRQChr16g0520451 Helianthus annuus HOM05D007038 ORTHO05D008893 7.9e-86 321.6 344 51.5
MBI14_g09472_MAGBIO Magnolia biondii HOM05D007038 ORTHO05D008893 3.0e-85 319.7 320 55.9
SGA_v2.0_scaffold265G46092 Striga asiatica HOM05D007038 ORTHO05D008893 1.3e-83 314.3 294 56.1
ATR0019G005 Amborella trichopoda HOM05D007038 ORTHO05D008893 8.2e-83 311.6 366 48.4
BolC9t57827H Brassica oleracea HOM05D007038 ORTHO05D008893 1.1e-82 311.2 428 44.6
Os08g0555800 Oryza sativa ssp. japonica HOM05D007038 ORTHO05D008893 3.8e-80 302.8 362 47.2
Zm00001eb180360 Zea mays HOM05D007038 ORTHO05D008893 4.8e-75 285.8 366 46.2
Gohir.D13G211300 Gossypium hirsutum HOM05D007038 ORTHO05D008893 2.6e-73 280.0 293 52.9
AUR62028347 Chenopodium quinoa HOM05D007038 ORTHO05D008893 8.8e-69 265.0 372 42.5
AUR62025344 Chenopodium quinoa HOM05D007038 ORTHO05D008893 5.7e-68 262.3 369 43.1
Potri.006G182301 Populus trichocarpa HOM05D007038 ORTHO05D008893 4.5e-65 252.7 173 72.3
Nitab4.5_0002320g0050 Nicotiana tabacum HOM05D001418 ORTHO05D002038 1.4e-61 241.1 419 39.9
CsaV3_2G007610 Cucumis sativus L. HOM05D007038 ORTHO05D008893 4.8e-59 232.6 279 49.8
Solyc07g005790.4 Solanum lycopersicum HOM05D007038 ORTHO05D008893 2.4e-58 230.3 179 62.0
CAN.G160.33 Capsicum annuum HOM05D007038 ORTHO05D008893 8.3e-51 205.3 162 61.1
unitig_46.g18476 Utricularia gibba HOM05D007038 ORTHO05D008893 3.8e-48 196.4 225 48.0
Peaxi162Scf00401g00327 Petunia axillaris HOM05D007038 ORTHO05D008893 5.6e-47 192.6 147 62.6
Solyc07g005800.2 Solanum lycopersicum HOM05D007038 ORTHO05D008893 1.5e-39 167.9 165 55.8
Potri.006G182201 Populus trichocarpa HOM05D007038 ORTHO05D008893 2.8e-38 163.7 172 55.8
Peaxi162Scf00401g00326 Petunia axillaris HOM05D007038 ORTHO05D008893 1.1e-37 161.8 176 54.0
Hma1.2p1_0222F.1_g093710 Hydrangea macrophylla HOM05D007038 ORTHO05D008893 5.8e-28 129.4 83 73.5
Hma1.2p1_0222F.1_g093742 Hydrangea macrophylla HOM05D007038 ORTHO05D008893 5.8e-28 129.4 83 73.5
SHI02845 Sapria himalayana HOM05D007038 ORTHO05D008893 1.0e-24 118.6 136 53.7
Pp3c7_6690 Physcomitrium patens HOM05D007038 ORTHO05D008893 3.3e-23 113.6 363 25.3
CDE02G0638 Ceratophyllum demersum HOM05D007038 ORTHO05D008893 4.7e-22 109.8 152 44.1
CDE05G1617 Ceratophyllum demersum HOM05D007038 ORTHO05D008893 6.2e-22 109.4 154 42.2
PSO782G2459 Papaver somniferum HOM05D007038 ORTHO05D008893 8.9e-21 105.5 111 53.2
Ah.14g084570 Amaranthus hybridus HOM05D007038 ORTHO05D008893 2.7e-09 67.4 61 55.7
HPP92_020432 Vanilla planifolia HOM05D000367 ORTHO05D008893 3.5e-09 67.0 137 38.0


User provided reference genes

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