Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.16G104100 Carya illinoinensis HOM05D005675 ORTHO05D006884 1.2e-236 822.8 430 100.0
Cfa020754 Carpinus fangiana HOM05D005675 ORTHO05D006884 1.1e-144 517.3 363 76.0
QL11p008661 Quercus lobata HOM05D005675 ORTHO05D006884 1.0e-142 510.8 359 77.4
Prupe.4G276600 Prunus persica HOM05D005675 ORTHO05D006884 3.2e-115 419.5 363 62.8
Dinv26452 Davidia involucrata HOM05D005675 ORTHO05D006884 1.3e-111 407.5 361 63.2
Potri.006G078700 Populus trichocarpa HOM05D005675 ORTHO05D006884 6.2e-111 405.2 362 60.8
Manes.01G177400 Manihot esculenta HOM05D005675 ORTHO05D006884 2.0e-109 400.2 363 58.7
Sabra06G0059600 Salix brachista HOM05D005675 ORTHO05D006884 5.8e-109 398.7 362 59.1
RcHm_v2.0_Chr2g0128761 Rosa chinensis HOM05D005675 ORTHO05D006884 9.9e-109 397.9 361 60.9
Haze_19098 Corylus avellana HOM05D005675 ORTHO05D006884 1.7e-108 397.1 391 58.8
CSS0039496 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 4.9e-108 395.6 360 60.8
MD07G1305000 Malus domestica HOM05D005675 ORTHO05D006884 1.1e-107 394.4 364 60.4
Ciclev10008766m.g Citrus clementina HOM05D005675 ORTHO05D006884 2.4e-107 393.3 356 59.6
Dinv25398 Davidia involucrata HOM05D005675 ORTHO05D006884 1.7e-105 387.1 361 61.5
Actinidia02470 Actinidia chinensis HOM05D005675 ORTHO05D006884 3.0e-105 386.3 348 60.1
FAN09G4269 Fragaria x ananassa HOM05D005675 ORTHO05D006884 1.9e-104 383.6 367 58.3
FAN14G0585 Fragaria x ananassa HOM05D005675 ORTHO05D006884 5.6e-104 382.1 367 58.0
GSVIVG01000235001 Vitis vinifera HOM05D005675 ORTHO05D006884 9.6e-104 381.3 352 58.8
Lj1g0011117 Lotus japonicus HOM05D005675 ORTHO05D006884 4.8e-103 379.0 359 58.2
TWI63G1173 Tripterygium wilfordii HOM05D005675 ORTHO05D006884 1.4e-102 377.5 354 57.6
TAR626G0076 Trochodendron aralioides HOM05D005675 ORTHO05D006884 5.3e-102 375.6 364 59.1
Hma1.2p1_0661F.1_g198030 Hydrangea macrophylla HOM05D005675 ORTHO05D006884 5.8e-101 372.1 365 58.9
FAN05G3686 Fragaria x ananassa HOM05D005675 ORTHO05D006884 4.2e-99 365.9 379 55.1
Duzib168G1643 Durio zibethinus HOM05D005675 ORTHO05D006884 5.4e-99 365.5 348 58.0
COL.COLO4_23415 Corchorus olitorius HOM05D005675 ORTHO05D006884 7.9e-98 361.7 347 57.3
Ca_25634_v3 Cicer arietinum L. HOM05D005675 ORTHO05D001317 1.3e-97 360.9 346 57.8
Gohir.D08G027200 Gossypium hirsutum HOM05D005675 ORTHO05D006884 1.3e-97 360.9 347 57.1
Cpa.g.sc115.21 Carica papaya HOM05D005675 ORTHO05D006884 1.8e-97 360.5 360 56.9
Gohir.A08G016800 Gossypium hirsutum HOM05D005675 ORTHO05D006884 2.3e-97 360.1 347 57.3
Gorai.004G024100 Gossypium raimondii HOM05D005675 ORTHO05D006884 6.7e-97 358.6 347 57.1
PGR044G2364 Punica granatum HOM05D005675 ORTHO05D006884 1.1e-96 357.8 358 56.7
Eucgr.C02170 Eucalyptus grandis HOM05D005675 ORTHO05D006884 1.9e-96 357.1 353 56.7
vmacro20762 Vaccinium macrocarpon HOM05D005675 ORTHO05D006884 2.1e-95 353.6 406 52.7
TWI34G2031 Tripterygium wilfordii HOM05D005675 ORTHO05D006884 3.4e-93 346.3 358 54.7
CANSAT80G1422 Cannabis sativa HOM05D005675 ORTHO05D006884 1.7e-92 344.0 352 54.5
Thecc.09G196800 Theobroma cacao HOM05D005675 ORTHO05D006884 1.7e-92 344.0 331 57.7
TPR.G21343 Trifolium pratense HOM05D005675 ORTHO05D006884 2.9e-92 343.2 358 54.2
Medtr6g093070 Medicago truncatula HOM05D005675 ORTHO05D006884 6.5e-92 342.0 354 53.7
Cc00_g00090 Coffea canephora HOM05D005675 ORTHO05D006884 7.9e-90 335.1 356 53.4
Phvul.004G178000 Phaseolus vulgaris HOM05D005675 ORTHO05D006884 3.3e-88 329.7 362 52.2
Prupe.3G126100 Prunus persica HOM05D005675 ORTHO05D006884 9.6e-88 328.2 354 55.4
Rhsim01G0109900 Rhododendron simsii HOM05D005675 ORTHO05D006884 1.6e-87 327.4 327 56.3
Glyma.01G001700 Glycine max HOM05D005675 ORTHO05D006884 6.2e-87 325.5 362 53.3
Lalb_Chr14g0362531 Lupinus albus HOM05D005675 ORTHO05D006884 1.8e-86 323.9 355 52.4
Solyc12g017470.2 Solanum lycopersicum HOM05D005675 ORTHO05D006884 5.3e-86 322.4 359 51.0
DCAR_009047 Daucus carota HOM05D005675 ORTHO05D006884 2.6e-85 320.1 358 52.2
arahy.Tifrunner.gnm1.ann1.RL68NL Arachis hypogaea HOM05D005675 ORTHO05D006884 3.4e-85 319.7 371 50.1
VMungo0464G1932 Vigna mungo HOM05D005675 ORTHO05D001317 3.4e-85 319.7 359 51.0
PSO063G5127 Papaver somniferum HOM05D005675 ORTHO05D006884 5.8e-85 318.9 366 50.8
MSTRG.26518 Avicennia marina HOM05D005675 ORTHO05D006884 2.2e-84 317.0 365 51.2
CAN.G1751.7 Capsicum annuum HOM05D005675 ORTHO05D006884 8.4e-84 315.1 356 51.1
Atru.chr2.1389 Acer truncatum HOM05D005675 ORTHO05D006884 1.1e-83 314.7 349 53.6
PSO170G1351 Papaver somniferum HOM05D005675 ORTHO05D006884 7.1e-83 312.0 361 52.1
ClCG05G011260 Citrullus lanatus HOM05D005675 ORTHO05D006884 1.2e-82 311.2 353 52.1
Nitab4.5_0014696g0010 Nicotiana tabacum HOM05D005675 ORTHO05D006884 1.6e-82 310.8 362 49.7
Sopen07g006010 Solanum pennellii HOM05D005675 ORTHO05D006884 8.7e-81 305.1 358 50.6
Sed0020807 Sechium edule HOM05D005675 ORTHO05D006884 1.9e-80 303.9 352 51.7
Solyc07g017290.4 Solanum lycopersicum HOM05D005675 ORTHO05D006884 5.7e-80 302.4 358 50.0
THA.LOC104815311 Tarenaya hassleriana HOM05D005675 ORTHO05D006884 1.4e-78 297.7 344 48.0
SalBow5G0607 Salvia bowleyana HOM05D005675 ORTHO05D006884 7.7e-77 292.0 374 48.9
MBI13_g31573_MAGBIO Magnolia biondii HOM05D005675 ORTHO05D006884 3.6e-74 283.1 390 46.2
Migut.L01917 Erythranthe guttata HOM05D005675 ORTHO05D006884 4.6e-74 282.7 362 46.1
ECA240G2624 Erigeron canadensis HOM05D005675 ORTHO05D006884 1.8e-73 280.8 350 48.0
SGA_v2.0_scaffold21G09606 Striga asiatica HOM05D005675 ORTHO05D006884 3.3e-72 276.6 366 47.0
CsaV3_3G021160 Cucumis sativus L. HOM05D005675 ORTHO05D006884 4.3e-72 276.2 350 48.3
FAN02G0472 Fragaria x ananassa HOM05D005675 ORTHO05D006884 1.8e-70 270.8 291 53.6
PGSC0003DMG400006457 Solanum tuberosum HOM05D005675 ORTHO05D006884 1.8e-70 270.8 315 49.2
FvH4_6g26940 Fragaria vesca HOM05D005675 ORTHO05D006884 2.4e-70 270.4 263 55.9
Lsat_1_v5_gn_7_57460 Lactuca sativa HOM05D005675 ORTHO05D006884 4.1e-70 269.6 346 47.4
Aa31LG3G3440 Aethionema arabicum HOM05D005675 ORTHO05D006884 7.7e-69 265.4 350 45.4
BolC5t34404H Brassica oleracea HOM05D005675 ORTHO05D006884 7.7e-69 265.4 349 46.4
C05p57470 Brassica napus HOM05D005675 ORTHO05D006884 1.3e-68 264.6 349 45.8
BraA03t12828Z Brassica rapa HOM05D005675 ORTHO05D006884 2.9e-68 263.5 351 46.7
SGA_v2.0_scaffold339G49254 Striga asiatica HOM05D005675 ORTHO05D006884 5.0e-68 262.7 363 44.9
CAN.G1751.9 Capsicum annuum HOM05D005675 ORTHO05D006884 8.5e-68 261.9 313 47.9
BcaC05g29447 Brassica carinata HOM05D005675 ORTHO05D006884 1.4e-67 261.2 346 46.2
AL3G45830 Arabidopsis lyrata HOM05D005675 ORTHO05D006884 9.4e-67 258.5 351 47.0
BraA05t22649Z Brassica rapa HOM05D005675 ORTHO05D006884 9.4e-67 258.5 349 45.8
BcaC01g04171 Brassica carinata HOM05D005675 ORTHO05D006884 1.2e-66 258.1 348 45.7
AL3G22010 Arabidopsis lyrata HOM05D005675 ORTHO05D006884 2.1e-66 257.3 367 45.5
Carub.0003s0981 Capsella rubella HOM05D005675 ORTHO05D006884 4.7e-66 256.1 351 45.6
MELO3C020255.2 Cucumis melo HOM05D005675 ORTHO05D006884 4.7e-66 256.1 333 46.2
A03p36640 Brassica napus HOM05D005675 ORTHO05D006884 6.1e-66 255.8 351 44.7
HanXRQChr03g0067281 Helianthus annuus HOM05D005675 ORTHO05D006884 6.1e-66 255.8 356 44.4
Oeu036952.2 Olea europaea HOM05D005675 ORTHO05D006884 1.0e-65 255.0 465 38.3
AT3G10572 Arabidopsis thaliana HOM05D005675 ORTHO05D006884 2.3e-65 253.8 352 45.7
A05p38580 Brassica napus HOM05D005675 ORTHO05D006884 3.0e-65 253.4 363 44.1
Sp3g08870 Schrenkiella parvula HOM05D005675 ORTHO05D006884 6.7e-65 252.3 348 45.4
BolC3t16698H Brassica oleracea HOM05D005675 ORTHO05D006884 5.7e-64 249.2 348 44.8
CAN.G309.91 Capsicum annuum HOM05D005675 ORTHO05D006884 7.4e-64 248.8 286 49.7
Thhalv10021093m.g Eutrema salsugineum HOM05D005675 ORTHO05D006884 6.3e-63 245.7 347 45.5
Ah.06g185690 Amaranthus hybridus HOM05D005675 ORTHO05D006884 9.1e-62 241.9 356 42.1
AUR62002223 Chenopodium quinoa HOM05D005675 ORTHO05D006884 2.0e-61 240.7 346 43.4
SHI13641 Sapria himalayana HOM05D005675 ORTHO05D006884 1.0e-60 238.4 376 43.1
CAN.G486.3 Capsicum annuum HOM05D002496 ORTHO05D002787 6.5e-60 235.7 287 47.0
CSS0020115 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 1.9e-59 234.2 206 62.1
Aqoxy6G03025 Aquilegia oxysepala HOM05D005675 ORTHO05D006884 1.2e-58 231.5 310 43.2
ATR0626G294 Amborella trichopoda HOM05D005675 ORTHO05D006884 3.6e-58 229.9 379 39.6
Glyma.07G130600 Glycine max HOM05D005675 ORTHO05D006884 6.1e-58 229.2 281 49.8
AUR62015436 Chenopodium quinoa HOM05D005675 ORTHO05D006884 1.4e-57 228.0 337 42.4
HPP92_010804 Vanilla planifolia HOM05D005675 ORTHO05D006884 1.5e-56 224.6 358 39.9
Sc26g0001420 Simmondsia chinensis HOM05D005675 ORTHO05D006884 3.7e-55 219.9 317 40.7
Os06g0702800 Oryza sativa ssp. japonica HOM05D005675 ORTHO05D006884 5.0e-52 209.5 376 37.0
Hund11839 Selenicereus undatus HOM05D005675 ORTHO05D006884 1.5e-51 208.0 358 39.9
TAR383G0085 Trochodendron aralioides HOM05D005675 ORTHO05D006884 1.9e-51 207.6 286 44.8
Nn8g41130 Nelumbo nucifera HOM05D005675 ORTHO05D006884 3.2e-51 206.8 196 59.7
CDE05G2328 Ceratophyllum demersum HOM05D005675 ORTHO05D006884 2.2e-47 194.1 358 37.7
Sopen12g008260 Solanum pennellii HOM05D005675 ORTHO05D006884 2.2e-47 194.1 207 52.2
Nitab4.5_0000899g0040 Nicotiana tabacum HOM05D005675 ORTHO05D006884 4.8e-47 193.0 208 51.4
Lju432C7G1 Lonicera japonica HOM05D005675 ORTHO05D006884 6.3e-47 192.6 363 39.4
EL10Ac3g05860 Beta vulgaris HOM05D005675 ORTHO05D006884 1.4e-46 191.4 324 39.2
C03p44280 Brassica napus HOM05D005675 ORTHO05D006884 4.5e-45 186.4 348 38.2
Zm00001eb227160 Zea mays HOM05D005675 ORTHO05D006884 4.2e-43 179.9 326 38.3
Haze_19095 Corylus avellana HOM05D005675 ORTHO05D006884 1.2e-42 178.3 122 75.4
Peaxi162Scf01527g00006 Petunia axillaris HOM05D005675 ORTHO05D006884 5.2e-41 172.9 216 46.8
PSO170G0789 Papaver somniferum HOM05D005675 ORTHO05D006884 1.1e-38 165.2 265 42.6
PSO170G4889 Papaver somniferum HOM05D005675 ORTHO05D006884 1.1e-38 165.2 265 42.6
PSO170G5374 Papaver somniferum HOM05D005675 ORTHO05D006884 1.1e-38 165.2 265 42.6
CARHR085110 Cardamine hirsuta HOM05D005675 ORTHO05D006884 1.1e-35 155.2 255 40.4
PSO170G3345 Papaver somniferum HOM05D005675 ORTHO05D006884 3.3e-35 153.7 253 41.9
PSO431G0001 Papaver somniferum HOM05D005675 ORTHO05D006884 9.5e-35 152.1 220 44.1
unitig_578.g16399 Utricularia gibba HOM05D005675 ORTHO05D006884 2.1e-34 151.0 200 47.5
PGSC0003DMG400009563 Solanum tuberosum HOM05D005675 ORTHO05D006884 3.5e-29 133.7 164 47.6
SEGI_03452 Sequoiadendron giganteum HOM05D005675 ORTHO05D006884 3.9e-28 130.2 299 32.8
CAN.G2070.2 Capsicum annuum HOM05D005675 ORTHO05D006884 6.8e-25 119.4 170 44.7
Pp3c9_5270 Physcomitrium patens HOM05D005675 ORTHO05D006884 1.1e-22 112.1 391 27.9
unitig_578.g16398 Utricularia gibba HOM05D005675 ORTHO05D006884 2.0e-21 107.8 110 48.2
CAN.G1703.6 Capsicum annuum HOM05D002496 ORTHO05D002787 3.5e-21 107.1 116 45.7
Mapoly0082s0059 Marchantia polymorpha HOM05D005675 ORTHO05D006884 3.9e-20 103.6 404 28.0
CARHR085100 Cardamine hirsuta HOM05D005675 ORTHO05D006884 9.5e-19 99.0 97 60.8
Sopen12g008240 Solanum pennellii HOM05D005675 ORTHO05D006884 1.6e-18 98.2 100 56.0
CSS0044900 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 2.7e-13 80.9 72 63.9
Gohir.D08G027550 Gossypium hirsutum HOM05D005675 ORTHO05D006884 4.6e-13 80.1 66 56.1
SMO367G0141 Selaginella moellendorffii HOM05D005675 ORTHO05D006884 4.6e-13 80.1 200 30.0
Gorai.004G024600 Gossypium raimondii HOM05D005675 ORTHO05D006884 2.5e-11 74.3 66 53.0
AagrBONN_evm.TU.Sc2ySwM_344.4450 Anthoceros agrestis HOM05D034800 ORTHO05D006884 3.7e-07 60.5 410 23.4
Sopen00g008260 Solanum pennellii HOM05D005675 ORTHO05D006884 7.1e-06 56.2 40 70.0


User provided reference genes

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