Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.16G075600 Carya illinoinensis HOM05D006168 ORTHO05D007602 1.6e-74 282.7 149 100.0
Thecc.10G078900 Theobroma cacao HOM05D006168 ORTHO05D007602 2.2e-55 219.2 153 79.1
Duzib114G0883 Durio zibethinus HOM05D006168 ORTHO05D007602 2.9e-55 218.8 153 77.8
Duzib128G1786 Durio zibethinus HOM05D006168 ORTHO05D007602 1.1e-54 216.9 153 77.1
COL.COLO4_12167 Corchorus olitorius HOM05D006168 ORTHO05D007602 1.4e-54 216.5 153 78.4
GSVIVG01024249001 Vitis vinifera HOM05D006168 ORTHO05D007602 1.8e-54 216.1 150 76.7
Sabra04G0045100 Salix brachista HOM05D006168 ORTHO05D007602 3.2e-54 215.3 150 77.3
Gohir.A05G294800 Gossypium hirsutum HOM05D006168 ORTHO05D007602 1.2e-53 213.4 153 75.8
Potri.004G067300 Populus trichocarpa HOM05D006168 ORTHO05D007602 2.0e-53 212.6 145 78.6
QL10p033704 Quercus lobata HOM05D006168 ORTHO05D007602 2.7e-53 212.2 140 80.7
Gohir.D05G295400 Gossypium hirsutum HOM05D006168 ORTHO05D007602 3.5e-53 211.8 153 75.8
Cfa017805 Carpinus fangiana HOM05D006168 ORTHO05D007602 1.0e-52 210.3 148 76.4
Prupe.5G244900 Prunus persica HOM05D006168 ORTHO05D007602 5.0e-52 208.0 155 76.1
Dinv03501 Davidia involucrata HOM05D006168 ORTHO05D007602 8.6e-52 207.2 157 73.9
Dinv03506 Davidia involucrata HOM05D006168 ORTHO05D007602 8.6e-52 207.2 157 73.9
Manes.02G226600 Manihot esculenta HOM05D006168 ORTHO05D007602 4.3e-51 204.9 145 75.2
Gorai.009G312100 Gossypium raimondii HOM05D006168 ORTHO05D007602 2.8e-50 202.2 138 79.0
Atru.chr9.17 Acer truncatum HOM05D006168 ORTHO05D007602 3.6e-50 201.8 137 79.6
TWI81G0790 Tripterygium wilfordii HOM05D006168 ORTHO05D007602 1.4e-49 199.9 153 70.6
CANSAT35G1332 Cannabis sativa HOM05D006168 ORTHO05D007602 2.3e-49 199.1 142 73.2
Nn3g18550 Nelumbo nucifera HOM05D006168 ORTHO05D007602 4.0e-49 198.4 157 69.4
Hund08905 Selenicereus undatus HOM05D006168 ORTHO05D007602 4.0e-49 198.4 159 70.4
CsaV3_1G007610 Cucumis sativus L. HOM05D006168 ORTHO05D007602 8.9e-49 197.2 150 73.3
Aqoxy2G03978 Aquilegia oxysepala HOM05D006168 ORTHO05D007602 1.2e-48 196.8 152 68.4
EL10Ac8g18962 Beta vulgaris HOM05D006168 ORTHO05D007602 1.2e-48 196.8 155 68.4
CDE04G1298 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 1.2e-48 196.8 149 70.5
MELO3C002180.2 Cucumis melo HOM05D006168 ORTHO05D007602 1.5e-48 196.4 153 71.9
ClCG01G014720 Citrullus lanatus HOM05D006168 ORTHO05D007602 2.6e-48 195.7 145 74.5
ECA238G2000 Erigeron canadensis HOM05D006168 ORTHO05D007602 3.4e-48 195.3 149 70.5
AUR62028326 Chenopodium quinoa HOM05D006168 ORTHO05D007602 2.2e-47 192.6 157 70.1
Sed0019180 Sechium edule HOM05D006168 ORTHO05D007602 2.9e-47 192.2 153 71.2
Ah.14g084700 Amaranthus hybridus HOM05D006168 ORTHO05D007602 4.9e-47 191.4 155 69.0
PGR083G1429 Punica granatum HOM05D006168 ORTHO05D007602 4.9e-47 191.4 159 67.3
MD14G1246600 Malus domestica HOM05D006168 ORTHO05D007602 8.3e-47 190.7 155 69.7
AUR62025335 Chenopodium quinoa HOM05D006168 ORTHO05D007602 1.4e-46 189.9 135 73.3
TAR629G1867 Trochodendron aralioides HOM05D006168 ORTHO05D007602 1.9e-46 189.5 156 69.2
Lsat_1_v5_gn_2_6441 Lactuca sativa HOM05D006168 ORTHO05D007602 2.4e-46 189.1 147 67.3
RcHm_v2.0_Chr7g0176961 Rosa chinensis HOM05D006168 ORTHO05D007602 5.4e-46 188.0 160 67.5
Eucgr.H00657 Eucalyptus grandis HOM05D006168 ORTHO05D007602 7.0e-46 187.6 151 64.9
CDE08G0644 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 9.2e-46 187.2 156 67.3
MD06G1240400 Malus domestica HOM05D006168 ORTHO05D007602 9.2e-46 187.2 150 70.7
FAN18G0639 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.6e-45 186.4 164 66.5
FvH4_5g18550 Fragaria vesca HOM05D006168 ORTHO05D007602 3.5e-45 185.3 164 65.9
FAN04G0186 Fragaria x ananassa HOM05D006168 ORTHO05D007602 6.0e-45 184.5 163 65.6
HanXRQChr14g0428251 Helianthus annuus HOM05D006168 ORTHO05D007602 1.0e-44 183.7 146 67.1
Lj5g0014337 Lotus japonicus HOM05D006168 ORTHO05D007602 1.7e-44 183.0 161 66.5
FAN08G3581 Fragaria x ananassa HOM05D006168 ORTHO05D007602 6.6e-44 181.0 163 65.0
Peaxi162Scf00643g00537 Petunia axillaris HOM05D006168 ORTHO05D007602 1.1e-43 180.3 147 66.0
Cc02_g29290 Coffea canephora HOM05D006168 ORTHO05D007602 1.9e-43 179.5 172 60.5
Rhsim12G0137000 Rhododendron simsii HOM05D006168 ORTHO05D007602 2.5e-43 179.1 133 70.7
MBI06_g12548_MAGBIO Magnolia biondii HOM05D006168 ORTHO05D007602 4.3e-43 178.3 147 67.3
ECA238G0114 Erigeron canadensis HOM05D006168 ORTHO05D007602 6.2e-42 174.5 134 69.4
ECA238G1897 Erigeron canadensis HOM05D006168 ORTHO05D007602 6.2e-42 174.5 134 69.4
ECA238G2968 Erigeron canadensis HOM05D000092 ORTHO05D000042 6.2e-42 174.5 133 69.9
BraA03t12572Z Brassica rapa HOM05D006168 ORTHO05D007602 8.1e-42 174.1 141 68.8
BolC3t16418H Brassica oleracea HOM05D006168 ORTHO05D007602 1.1e-41 173.7 141 68.1
Lalb_Chr21g0311691 Lupinus albus HOM05D006168 ORTHO05D007602 3.1e-41 172.2 142 66.2
Solyc06g072170.2 Solanum lycopersicum HOM05D006168 ORTHO05D007602 5.2e-41 171.4 139 66.2
Sopen06g028470 Solanum pennellii HOM05D006168 ORTHO05D007602 5.2e-41 171.4 139 66.2
DCAR_011406 Daucus carota HOM05D006168 ORTHO05D007602 6.8e-41 171.0 137 67.2
PGSC0003DMG400027059 Solanum tuberosum HOM05D006168 ORTHO05D007602 8.9e-41 170.6 139 65.5
MSTRG.4316 Avicennia marina HOM05D006168 ORTHO05D007602 1.2e-40 170.2 160 63.8
PSO063G5228 Papaver somniferum HOM05D006168 ORTHO05D007602 1.2e-40 170.2 148 64.2
Migut.D02066 Erythranthe guttata HOM05D006168 ORTHO05D007602 1.5e-40 169.9 158 60.1
ATR0124G011 Amborella trichopoda HOM05D006168 ORTHO05D007602 2.0e-40 169.5 157 61.8
Aa31LG5G15370 Aethionema arabicum HOM05D006168 ORTHO05D007602 3.4e-40 168.7 150 64.0
Glyma.20G216400 Glycine max HOM05D006168 ORTHO05D007602 7.5e-40 167.5 145 66.2
Phvul.L006301 Phaseolus vulgaris HOM05D006168 ORTHO05D007602 1.3e-39 166.8 141 66.0
Glyma.10G174000 Glycine max HOM05D006168 ORTHO05D007602 2.2e-39 166.0 143 65.0
vmacro16399 Vaccinium macrocarpon HOM05D006168 ORTHO05D007602 2.9e-39 165.6 167 56.9
VMungo0720G1915 Vigna mungo HOM05D006168 ORTHO05D007602 2.9e-39 165.6 142 66.2
CARHR079400 Cardamine hirsuta HOM05D006168 ORTHO05D007602 4.9e-39 164.9 150 62.0
Sp3g03900 Schrenkiella parvula HOM05D006168 ORTHO05D007602 1.9e-38 162.9 145 62.1
SGA_v2.0_scaffold387G50509 Striga asiatica HOM05D006168 ORTHO05D007602 1.9e-38 162.9 157 60.5
Psat6g054520 Pisum sativum HOM05D006168 ORTHO05D007602 2.4e-38 162.5 167 57.5
CSS0046866 Camellia sinensis var. sinensis HOM05D006168 ORTHO05D007602 4.1e-38 161.8 97 83.5
AL3G15460 Arabidopsis lyrata HOM05D006168 ORTHO05D007602 2.1e-37 159.5 150 62.0
Ca_09928_v3 Cicer arietinum L. HOM05D006168 ORTHO05D007602 2.1e-37 159.5 169 58.0
Thhalv10021722m.g Eutrema salsugineum HOM05D006168 ORTHO05D007602 2.7e-37 159.1 145 62.8
Medtr1g077570 Medicago truncatula HOM05D006168 ORTHO05D007602 4.6e-37 158.3 171 57.3
Carub.0003s0432 Capsella rubella HOM05D006168 ORTHO05D007602 1.7e-36 156.4 146 63.0
Haze_18408 Corylus avellana HOM05D006168 ORTHO05D007602 1.7e-36 156.4 131 64.1
Ciclev10022597m.g Citrus clementina HOM05D006168 ORTHO05D007602 3.9e-36 155.2 152 59.2
HPP92_020852 Vanilla planifolia HOM05D006168 ORTHO05D007602 5.1e-36 154.8 142 65.5
THA.LOC104818656 Tarenaya hassleriana HOM05D006168 ORTHO05D007602 1.1e-35 153.7 150 60.0
AT3G05070 Arabidopsis thaliana HOM05D006168 ORTHO05D007602 1.9e-35 152.9 150 60.0
unitig_21.g20432 Utricularia gibba HOM05D006168 ORTHO05D007602 4.3e-35 151.8 155 57.4
C05p62160 Brassica napus HOM05D006168 ORTHO05D007602 2.1e-34 149.4 145 59.3
BolC5t34874H Brassica oleracea HOM05D006168 ORTHO05D007602 2.1e-34 149.4 145 59.3
A05p42500 Brassica napus HOM05D006168 ORTHO05D007602 3.6e-34 148.7 145 58.6
BraA05t23002Z Brassica rapa HOM05D006168 ORTHO05D007602 3.6e-34 148.7 145 58.6
SalBow8G4549 Salvia bowleyana HOM05D006168 ORTHO05D007602 1.1e-33 147.1 145 61.4
SEGI_05677 Sequoiadendron giganteum HOM05D006168 ORTHO05D007602 5.2e-33 144.8 155 52.9
CAN.G65.65 Capsicum annuum HOM05D006168 ORTHO05D007602 8.9e-33 144.1 94 73.4
Oeu034422.1 Olea europaea HOM05D006168 ORTHO05D007602 1.9e-30 136.3 136 59.6
RcHm_v2.0_Chr5g0006211 Rosa chinensis HOM05D006168 ORTHO05D007602 2.4e-30 136.0 151 55.0
Os06g0730800 Oryza sativa ssp. japonica HOM05D006168 ORTHO05D007602 2.7e-29 132.5 180 46.7
arahy.Tifrunner.gnm1.ann1.52MA05 Arachis hypogaea HOM05D006168 ORTHO05D007602 1.5e-27 126.7 144 54.2
Zm00001eb228960 Zea mays HOM05D006168 ORTHO05D007602 2.5e-27 125.9 180 46.1
BcaC05g29992 Brassica carinata HOM05D006168 ORTHO05D007602 4.3e-27 125.2 143 53.1
Pp3c19_22150 Physcomitrium patens HOM05D006168 ORTHO05D007602 4.3e-27 125.2 149 55.7
Sed0015845 Sechium edule HOM05D006168 ORTHO05D007602 1.8e-25 119.8 140 54.3
AagrBONN_evm.TU.Sc2ySwM_368.389 Anthoceros agrestis HOM05D006168 ORTHO05D007602 9.0e-25 117.5 137 54.0
Mapoly0133s0024 Marchantia polymorpha HOM05D006168 ORTHO05D007602 1.5e-24 116.7 136 53.7
Nitab4.5_0000477g0160 Nicotiana tabacum HOM05D006168 ORTHO05D007602 7.6e-24 114.4 104 61.5
FAN11G1802 Fragaria x ananassa HOM05D006168 ORTHO05D007602 9.9e-24 114.0 145 47.6
Nitab4.5_0002771g0020 Nicotiana tabacum HOM05D006168 ORTHO05D007602 9.9e-24 114.0 84 69.0
FvH4_3g03920 Fragaria vesca HOM05D006168 ORTHO05D007602 1.7e-23 113.2 145 46.9
FAN16G2203 Fragaria x ananassa HOM05D006168 ORTHO05D007602 2.9e-23 112.5 148 46.6
FAN25G2877 Fragaria x ananassa HOM05D006168 ORTHO05D007602 2.9e-23 112.5 147 44.9
BcaB04g19282 Brassica carinata HOM05D006168 ORTHO05D007602 3.8e-23 112.1 82 72.0
FAN21G2556 Fragaria x ananassa HOM05D006168 ORTHO05D007602 3.8e-23 112.1 147 46.3
Potri.017G154100 Populus trichocarpa HOM05D006168 ORTHO05D007602 1.1e-22 110.5 98 61.2
SMO147G0110 Selaginella moellendorffii HOM05D006168 ORTHO05D007602 1.4e-22 110.2 140 48.6
Sc15g0000010 Simmondsia chinensis HOM05D006168 ORTHO05D007602 4.2e-22 108.6 98 61.2
FAN13G0455 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.6e-21 106.7 105 56.2
CBR_g57849 Chara braunii HOM05D006168 ORTHO05D007602 8.7e-20 100.9 102 52.9
arahy.Tifrunner.gnm1.ann1.S1M3RU Arachis hypogaea HOM05D006168 ORTHO05D007602 1.6e-18 96.7 121 50.4
Cre12.g518300 Chlamydomonas reinhardtii HOM05D006168 ORTHO05D007602 1.8e-17 93.2 134 47.0
BcaC01g04336 Brassica carinata HOM05D006168 ORTHO05D007602 2.4e-17 92.8 107 51.4
TPR.G35595 Trifolium pratense HOM05D006168 ORTHO05D007602 6.9e-17 91.3 105 51.4
TPR.G8871 Trifolium pratense HOM05D006168 ORTHO05D007602 9.9e-16 87.4 60 78.3
MCO12G027 Micromonas commoda HOM05D006168 ORTHO05D007602 1.3e-10 70.5 122 38.5
A03p33970 Brassica napus HOM05D006168 ORTHO05D007602 3.1e-09 65.9 69 53.6
Haze_01753 Corylus avellana HOM05D006168 ORTHO05D007602 1.3e-07 60.5 52 69.2
C03p41350 Brassica napus HOM05D006168 ORTHO05D007602 2.2e-07 59.7 106 42.5
Cpa.g.sc117.34 Carica papaya HOM05D006168 ORTHO05D007602 2.2e-07 59.7 48 64.6
PRCOL_00005394 Prasinoderma coloniale HOM05D006168 ORTHO05D007602 9.3e-06 54.3 107 37.4


User provided reference genes

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