Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.16G074900 Carya illinoinensis HOM05D008849 ORTHO05D010556 2.0e-73 278.9 129 100.0
CiPaw.02G127100 Carya illinoinensis HOM05D008849 ORTHO05D010556 6.9e-66 253.8 129 90.7
CiPaw.01G204700 Carya illinoinensis HOM05D008849 ORTHO05D010556 1.3e-35 153.3 137 50.4
QL11p022534 Quercus lobata HOM05D008849 ORTHO05D010556 2.8e-35 152.1 128 51.6
FvH4_4g05650 Fragaria vesca HOM05D008849 ORTHO05D010556 1.2e-33 146.7 135 48.9
FAN17G1524 Fragaria x ananassa HOM05D008849 ORTHO05D010556 1.0e-32 143.7 135 48.1
RcHm_v2.0_Chr4g0396831 Rosa chinensis HOM05D008849 ORTHO05D010556 5.0e-32 141.4 136 47.1
Sabra03G0128300 Salix brachista HOM05D008849 ORTHO05D010556 1.5e-31 139.8 127 52.0
Potri.003G175000 Populus trichocarpa HOM05D008849 ORTHO05D010556 1.2e-30 136.7 128 51.6
Potri.001G053200 Populus trichocarpa HOM05D008849 ORTHO05D010556 1.6e-30 136.3 128 52.3
Thecc.04G213000 Theobroma cacao HOM05D008849 ORTHO05D010556 2.6e-28 129.0 125 48.8
Cfa014873 Carpinus fangiana HOM05D008849 ORTHO05D010556 7.5e-28 127.5 136 47.8
Atru.chr4.1805 Acer truncatum HOM05D008849 ORTHO05D010556 9.8e-28 127.1 138 44.2
Ciclev10007007m.g Citrus clementina HOM05D008849 ORTHO05D010556 1.3e-27 126.7 116 48.3
Gorai.011G162700 Gossypium raimondii HOM05D008849 ORTHO05D010556 2.8e-27 125.6 128 46.1
Gohir.A10G120800 Gossypium hirsutum HOM05D008849 ORTHO05D010556 2.4e-26 122.5 128 43.8
QL11p023932 Quercus lobata HOM05D008849 ORTHO05D010556 1.1e-23 113.6 120 50.8
Gohir.A09G202100 Gossypium hirsutum HOM05D008849 ORTHO05D010556 5.6e-23 111.3 133 42.1
RcHm_v2.0_Chr4g0396821 Rosa chinensis HOM05D008849 ORTHO05D010556 5.6e-23 111.3 120 40.0
Gohir.D10G145500 Gossypium hirsutum HOM05D008849 ORTHO05D010556 1.2e-22 110.2 95 50.5
Gohir.D09G196100 Gossypium hirsutum HOM05D008849 ORTHO05D010556 1.6e-22 109.8 133 41.4
Gorai.006G219500 Gossypium raimondii HOM05D008849 ORTHO05D010556 1.6e-22 109.8 133 41.4
Eucgr.E01057 Eucalyptus grandis HOM05D008849 ORTHO05D010556 3.6e-22 108.6 105 46.7
Potri.003G175100 Populus trichocarpa HOM05D008849 ORTHO05D010556 8.0e-22 107.5 111 43.2
Haze_11547 Corylus avellana HOM05D008849 ORTHO05D010556 4.4e-20 101.7 126 45.2
Sabra03G0128400 Salix brachista HOM05D005430 ORTHO05D007814 4.4e-20 101.7 109 39.4
COL.COLO4_34095 Corchorus olitorius HOM05D008849 ORTHO05D010556 5.7e-20 101.3 128 41.4
Potri.002G263900 Populus trichocarpa HOM05D008849 ORTHO05D010556 5.7e-20 101.3 115 36.5
QL04p034676 Quercus lobata HOM05D008849 ORTHO05D010556 6.4e-19 97.8 124 36.3
Manes.15G049200 Manihot esculenta HOM05D008849 ORTHO05D010556 1.4e-18 96.7 129 34.9
FAN17G2089 Fragaria x ananassa HOM05D008849 ORTHO05D010556 1.8e-18 96.3 131 36.6
COL.COLO4_26204 Corchorus olitorius HOM05D008849 ORTHO05D010556 4.1e-18 95.1 140 34.3
FvH4_4g05643 Fragaria vesca HOM05D008849 ORTHO05D010556 9.2e-18 94.0 130 35.4
Eucgr.H00101 Eucalyptus grandis HOM05D008849 ORTHO05D010556 2.3e-16 89.4 134 34.3
GSVIVG01012794001 Vitis vinifera HOM05D008849 ORTHO05D010556 3.9e-16 88.6 130 33.8
Dinv27154 Davidia involucrata HOM05D062440 ORTHO05D010556 1.2e-14 83.6 114 38.6
Rhsim09G0049000 Rhododendron simsii HOM05D004546 ORTHO05D005419 3.6e-14 82.0 114 37.7
Dinv44411 Davidia involucrata HOM05D062440 ORTHO05D010556 1.4e-13 80.1 129 34.1
Glyma.13G218100 Glycine max HOM05D014907 ORTHO05D010556 2.6e-12 75.9 124 33.9
Lalb_Chr18g0055471 Lupinus albus HOM05D014907 ORTHO05D010556 3.4e-12 75.5 125 32.0
Thecc.04G212800 Theobroma cacao HOM05D066189 ORTHO05D010556 5.8e-12 74.7 119 31.9
Psat1g126640 Pisum sativum HOM05D014907 ORTHO05D010556 1.3e-11 73.6 135 33.3
vmacro22823 Vaccinium macrocarpon HOM05D000256 ORTHO05D000119 5.4e-10 68.2 106 36.8
Actinidia35944 Actinidia chinensis HOM05D008849 ORTHO05D010556 7.0e-10 67.8 107 31.8
TPR.G17735 Trifolium pratense HOM05D014907 ORTHO05D010556 1.2e-09 67.0 127 32.3
Lalb_Chr04g0255981 Lupinus albus HOM05D008849 ORTHO05D010556 7.8e-09 64.3 122 30.3
Cpa.g.sc59.84 Carica papaya HOM05D031968 ORTHO05D010556 5.0e-08 61.6 126 29.4
COL.COLO4_34093 Corchorus olitorius HOM05D066189 ORTHO05D010556 6.6e-08 61.2 94 33.0
TWI73G0050 Tripterygium wilfordii HOM05D005430 ORTHO05D007814 6.6e-08 61.2 135 30.4
Hma1.2p1_0903F.1_g235070 Hydrangea macrophylla HOM05D005430 ORTHO05D007814 8.6e-08 60.8 141 31.9
Medtr7g034935 Medicago truncatula HOM05D052746 ORTHO05D015711 8.6e-08 60.8 115 27.0
Medtr7g034965 Medicago truncatula HOM05D052746 ORTHO05D015711 8.6e-08 60.8 115 27.0
Medtr2g461570 Medicago truncatula HOM05D014907 ORTHO05D010556 1.9e-07 59.7 101 31.7
Hma1.2p1_0146F.1_g065570 Hydrangea macrophylla HOM05D005430 ORTHO05D000119 3.3e-07 58.9 137 29.9
Cpa.g.sc12.57 Carica papaya HOM05D005430 ORTHO05D007814 5.6e-07 58.2 137 27.0
Glyma.13G218125 Glycine max HOM05D014907 ORTHO05D010556 7.3e-07 57.8 127 29.9
SalBow2G0067 Salvia bowleyana HOM05D005430 ORTHO05D000119 7.3e-07 57.8 105 30.5
Hma1.2p1_1359F.1_g278080 Hydrangea macrophylla HOM05D000256 ORTHO05D000119 9.5e-07 57.4 144 28.5
Rhsim06G0013100 Rhododendron simsii HOM05D005430 ORTHO05D007814 1.2e-06 57.0 106 32.1
Phvul.007G007700 Phaseolus vulgaris HOM05D009801 ORTHO05D011967 1.6e-06 56.6 90 26.7
PGSC0003DMG400041803 Solanum tuberosum HOM05D065601 ORTHO05D051329 1.6e-06 56.6 98 29.6
GSVIVG01029041001 Vitis vinifera HOM05D005430 ORTHO05D007814 1.6e-06 56.6 134 29.9
Hma1.2p1_0903F.1_g234940 Hydrangea macrophylla HOM05D000256 ORTHO05D000119 2.1e-06 56.2 144 28.5
Cpa.g.sc59.83 Carica papaya HOM05D031968 ORTHO05D010556 2.8e-06 55.8 44 45.5
Dinv38286 Davidia involucrata HOM05D005430 ORTHO05D007814 2.8e-06 55.8 107 31.8
Medtr6g007125 Medicago truncatula HOM05D018373 ORTHO05D020881 2.8e-06 55.8 101 29.7
SalBow4G3261 Salvia bowleyana HOM05D000256 ORTHO05D000119 4.7e-06 55.1 95 33.7
arahy.Tifrunner.gnm1.ann1.D09HZI Arachis hypogaea HOM05D005430 ORTHO05D007814 6.2e-06 54.7 113 31.0
Psat3g162040 Pisum sativum HOM05D018373 ORTHO05D020881 8.1e-06 54.3 76 36.8


User provided reference genes

Program Settings