Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.16G073500 Carya illinoinensis HOM05D006270 ORTHO05D007755 5.7e-144 514.2 257 100.0
QL09p054436 Quercus lobata HOM05D006270 ORTHO05D007755 1.1e-78 297.4 293 61.4
Cfa017859 Carpinus fangiana HOM05D006270 ORTHO05D007755 5.6e-75 285.0 285 58.6
Haze_18335 Corylus avellana HOM05D006270 ORTHO05D007755 3.1e-73 279.3 292 56.8
QL09p054318 Quercus lobata HOM05D006270 ORTHO05D007755 2.0e-72 276.6 231 66.7
Actinidia23030 Actinidia chinensis HOM05D006270 ORTHO05D007755 8.4e-71 271.2 282 52.5
FAN10G3159 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.9e-67 260.0 224 60.3
FAN10G0687 Fragaria x ananassa HOM05D006270 ORTHO05D007755 3.3e-67 259.2 225 59.6
FAN06G0691 Fragaria x ananassa HOM05D006270 ORTHO05D007755 5.6e-67 258.5 225 59.6
FAN06G0861 Fragaria x ananassa HOM05D006270 ORTHO05D007755 5.6e-67 258.5 225 59.6
RcHm_v2.0_Chr1g0380911 Rosa chinensis HOM05D006270 ORTHO05D007755 9.6e-67 257.7 295 51.2
FAN01G1506 Fragaria x ananassa HOM05D006270 ORTHO05D007755 6.2e-66 255.0 225 59.1
FAN03G2743 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.1e-65 254.2 225 59.1
GSVIVG01026015001 Vitis vinifera HOM05D006270 ORTHO05D007755 4.4e-64 248.8 282 51.8
TAR628G1531 Trochodendron aralioides HOM05D006270 ORTHO05D007755 5.8e-64 248.4 298 50.0
Rhsim12G0005700 Rhododendron simsii HOM05D006270 ORTHO05D007755 6.4e-63 245.0 296 50.7
Dinv03143 Davidia involucrata HOM05D006270 ORTHO05D007755 3.2e-62 242.7 299 48.2
Lj3g0009409 Lotus japonicus HOM05D006270 ORTHO05D007755 3.2e-62 242.7 283 51.9
Glyma.08G240100 Glycine max HOM05D006270 ORTHO05D007755 1.2e-61 240.7 284 49.6
TWI59G0231 Tripterygium wilfordii HOM05D006270 ORTHO05D007755 4.6e-61 238.8 227 58.1
Glyma.12G002000 Glycine max HOM05D006270 ORTHO05D007755 1.0e-60 237.7 285 49.1
arahy.Tifrunner.gnm1.ann1.WW5SAZ Arachis hypogaea HOM05D006270 ORTHO05D007755 1.5e-59 233.8 229 55.9
VMungo1127G1589 Vigna mungo HOM05D006270 ORTHO05D007755 1.5e-59 233.8 288 48.6
Ciclev10021647m.g Citrus clementina HOM05D006270 ORTHO05D007755 2.5e-59 233.0 235 54.0
Cc10_g11640 Coffea canephora HOM05D006270 ORTHO05D007755 2.5e-59 233.0 310 44.8
arahy.Tifrunner.gnm1.ann1.3FR1H5 Arachis hypogaea HOM05D006270 ORTHO05D007755 4.3e-59 232.3 229 55.9
Phvul.011G002300 Phaseolus vulgaris HOM05D006270 ORTHO05D007755 2.8e-58 229.6 211 55.9
vmacro00974 Vaccinium macrocarpon HOM05D006270 ORTHO05D007755 2.8e-58 229.6 233 55.4
MSTRG.25449 Avicennia marina HOM05D006270 ORTHO05D007755 3.6e-58 229.2 293 47.4
Psat7g147160 Pisum sativum HOM05D006270 ORTHO05D007755 8.1e-58 228.0 229 54.1
Migut.C01268 Erythranthe guttata HOM05D006270 ORTHO05D007755 5.3e-57 225.3 228 53.5
Aqoxy6G00085 Aquilegia oxysepala HOM05D006270 ORTHO05D007755 9.0e-57 224.6 203 58.1
Potri.005G054600 Populus trichocarpa HOM05D006270 ORTHO05D007755 9.0e-57 224.6 219 56.6
Thecc.03G315400 Theobroma cacao HOM05D006270 ORTHO05D007755 9.0e-57 224.6 210 55.7
Gohir.D08G172100 Gossypium hirsutum HOM05D006270 ORTHO05D007755 3.4e-56 222.6 206 55.3
Gorai.004G179400 Gossypium raimondii HOM05D006270 ORTHO05D007755 3.4e-56 222.6 218 53.2
TPR.G27896 Trifolium pratense HOM05D006270 ORTHO05D007755 3.4e-56 222.6 209 55.5
DCAR_028408 Daucus carota HOM05D006270 ORTHO05D007755 4.5e-56 222.2 227 52.9
Lalb_Chr01g0000131 Lupinus albus HOM05D006270 ORTHO05D007755 9.9e-56 221.1 231 51.1
CANSAT21G0664 Cannabis sativa HOM05D006270 ORTHO05D007755 1.3e-55 220.7 231 53.2
ECA232G4580 Erigeron canadensis HOM05D006270 ORTHO05D007755 2.2e-55 219.9 193 57.0
Nitab4.5_0001579g0030 Nicotiana tabacum HOM05D006270 ORTHO05D007755 2.2e-55 219.9 227 52.0
SGA_v2.0_scaffold24G10562 Striga asiatica HOM05D006270 ORTHO05D007755 4.9e-55 218.8 243 49.4
Oeu032990.1 Olea europaea HOM05D006270 ORTHO05D007755 8.4e-55 218.0 190 60.0
Atru.chr13.2329 Acer truncatum HOM05D006270 ORTHO05D007755 1.4e-54 217.2 192 57.8
Gohir.A08G151000 Gossypium hirsutum HOM05D006270 ORTHO05D007755 2.4e-54 216.5 193 56.5
Manes.08G135800 Manihot esculenta HOM05D006270 ORTHO05D007755 2.4e-54 216.5 223 53.4
Nitab4.5_0000167g0160 Nicotiana tabacum HOM05D006270 ORTHO05D007755 1.6e-53 213.8 227 51.1
Duzib205G0009 Durio zibethinus HOM05D006270 ORTHO05D007755 2.1e-53 213.4 294 44.6
Sopen03g004530 Solanum pennellii HOM05D006270 ORTHO05D007755 2.1e-53 213.4 222 52.7
Sabra05G0047500 Salix brachista HOM05D006270 ORTHO05D007755 4.6e-53 212.2 260 50.0
PSO170G6113 Papaver somniferum HOM05D006270 ORTHO05D007755 1.0e-52 211.1 201 57.2
PSO782G5577 Papaver somniferum HOM05D006270 ORTHO05D007755 1.0e-52 211.1 201 56.7
ATR1136G034 Amborella trichopoda HOM05D006270 ORTHO05D007755 5.1e-52 208.8 185 60.5
PGSC0003DMG400014297 Solanum tuberosum HOM05D006270 ORTHO05D007755 5.1e-52 208.8 222 51.8
HanXRQChr05g0147941 Helianthus annuus HOM05D006270 ORTHO05D007755 1.1e-51 207.6 196 53.1
Lsat_1_v5_gn_0_7900 Lactuca sativa HOM05D006270 ORTHO05D007755 1.9e-51 206.8 220 50.5
Nitab4.5_0000167g0150 Nicotiana tabacum HOM05D006270 ORTHO05D007755 2.5e-51 206.5 249 49.4
PGR102G0747 Punica granatum HOM05D006270 ORTHO05D007755 2.5e-51 206.5 188 60.1
Solyc03g025710.3 Solanum lycopersicum HOM05D006270 ORTHO05D007755 2.5e-51 206.5 222 51.8
CAN.G307.5 Capsicum annuum HOM05D006270 ORTHO05D007755 3.3e-51 206.1 229 48.9
Sc23g0001640 Simmondsia chinensis HOM05D006270 ORTHO05D007755 3.3e-51 206.1 207 54.1
Eucgr.F02983 Eucalyptus grandis HOM05D006270 ORTHO05D007755 1.6e-50 203.8 223 52.0
AUR62023526 Chenopodium quinoa HOM05D006270 ORTHO05D007755 3.7e-50 202.6 231 51.1
SalBow7G0089 Salvia bowleyana HOM05D006270 ORTHO05D007755 4.8e-50 202.2 219 48.9
Cpa.g.sc66.22 Carica papaya HOM05D006270 ORTHO05D007755 6.2e-50 201.8 222 50.9
Nn5g27482 Nelumbo nucifera HOM05D006270 ORTHO05D007755 6.2e-50 201.8 263 48.3
EL10Ac1g00156 Beta vulgaris HOM05D006270 ORTHO05D007755 1.4e-49 200.7 198 55.1
ClCG09G010100 Citrullus lanatus HOM05D006270 ORTHO05D007755 1.5e-48 197.2 284 40.8
CARHR064850 Cardamine hirsuta HOM05D006270 ORTHO05D007755 5.8e-48 195.3 247 47.8
Sed0023542 Sechium edule HOM05D006270 ORTHO05D007755 5.8e-48 195.3 283 43.1
HPP92_002765 Vanilla planifolia HOM05D006270 ORTHO05D007755 5.8e-48 195.3 241 48.1
Peaxi162Scf01013g00026 Petunia axillaris HOM05D006270 ORTHO05D007755 9.9e-48 194.5 216 47.7
CsaV3_7G024750 Cucumis sativus L. HOM05D006270 ORTHO05D007755 1.7e-47 193.7 294 40.8
C06p35210 Brassica napus HOM05D006270 ORTHO05D007755 2.2e-47 193.4 245 46.9
A07p30450 Brassica napus HOM05D006270 ORTHO05D007755 2.9e-47 193.0 198 53.0
BcaC08g45741 Brassica carinata HOM05D006270 ORTHO05D007755 6.4e-47 191.8 245 46.9
BolC6t38627H Brassica oleracea HOM05D006270 ORTHO05D007755 6.4e-47 191.8 245 46.9
Thhalv10019029m.g Eutrema salsugineum HOM05D006270 ORTHO05D007755 6.4e-47 191.8 198 53.0
Nitab4.5_0001579g0080 Nicotiana tabacum HOM05D006270 ORTHO05D007755 8.4e-47 191.4 219 50.7
BraA07t30681Z Brassica rapa HOM05D006270 ORTHO05D007755 1.1e-46 191.0 198 52.5
BcaB03g15641 Brassica carinata HOM05D006270 ORTHO05D007755 1.4e-46 190.7 197 52.3
Aa31LG4G10780 Aethionema arabicum HOM05D006270 ORTHO05D007755 3.2e-46 189.5 221 48.9
THA.LOC104809733 Tarenaya hassleriana HOM05D006270 ORTHO05D007755 3.2e-46 189.5 199 50.8
Sp5g27100 Schrenkiella parvula HOM05D006270 ORTHO05D007755 4.2e-46 189.1 198 52.5
Carub.0002s1881 Capsella rubella HOM05D006270 ORTHO05D007755 2.1e-45 186.8 198 52.5
AT1G72030 Arabidopsis thaliana HOM05D006270 ORTHO05D007755 6.0e-45 185.3 198 52.5
AL2G31660 Arabidopsis lyrata HOM05D006270 ORTHO05D007755 1.8e-44 183.7 223 48.4
Lj7A621T38 Lonicera japonica HOM05D006270 ORTHO05D007755 9.6e-43 177.9 110 72.7
SEGI_40158 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 1.3e-42 177.6 205 45.9
COL.COLO4_16875 Corchorus olitorius HOM05D006270 ORTHO05D007755 1.8e-41 173.7 161 55.9
Os07g0264800 Oryza sativa ssp. japonica HOM05D006270 ORTHO05D007755 1.8e-41 173.7 241 43.2
Ca_19683_v3 Cicer arietinum L. HOM05D006270 ORTHO05D007755 1.2e-40 171.0 109 72.5
Sopen11g010160 Solanum pennellii HOM05D006270 ORTHO05D007755 5.8e-40 168.7 182 46.7
unitig_8.g2905 Utricularia gibba HOM05D006270 ORTHO05D007755 1.0e-39 167.9 218 44.5
PGSC0003DMG400034528 Solanum tuberosum HOM05D006270 ORTHO05D007755 1.3e-39 167.5 185 47.6
PGSC0003DMG400007305 Solanum tuberosum HOM05D006270 ORTHO05D007755 3.8e-39 166.0 217 44.2
CAN.G1280.16 Capsicum annuum HOM05D006270 ORTHO05D007755 7.1e-38 161.8 188 48.4
AUR62004580 Chenopodium quinoa HOM05D006270 ORTHO05D007755 2.7e-37 159.8 109 74.3
SMO352G0005 Selaginella moellendorffii HOM05D006270 ORTHO05D007755 6.0e-37 158.7 189 42.9
Pp3c3_19510 Physcomitrium patens HOM05D006270 ORTHO05D007755 2.6e-32 143.3 192 41.7
CDE04G3476 Ceratophyllum demersum HOM05D006270 ORTHO05D007755 1.7e-31 140.6 172 48.8
SEGI_10565 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 5.0e-31 139.0 107 64.5
FvH4_7g31720 Fragaria vesca HOM05D006270 ORTHO05D007755 1.4e-30 137.5 157 50.3
Prupe.2G311100 Prunus persica HOM05D006270 ORTHO05D007755 9.3e-30 134.8 142 52.8
SEGI_32338 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 1.8e-28 130.6 120 59.2
Solyc11g020000.1 Solanum lycopersicum HOM05D006270 ORTHO05D007755 7.4e-27 125.2 161 44.1
CSS0031567 Camellia sinensis var. sinensis HOM05D006270 ORTHO05D007755 1.2e-24 117.9 127 52.8
Mapoly0148s0033 Marchantia polymorpha HOM05D006270 ORTHO05D007755 1.3e-23 114.4 179 36.3
SEGI_00952 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 8.5e-23 111.7 90 63.3
CBR_g50390 Chara braunii HOM05D000019 ORTHO05D000002 6.1e-21 105.5 108 47.2
Nitab4.5_0000329g0020 Nicotiana tabacum HOM05D006270 ORTHO05D007755 6.1e-21 105.5 115 50.4
MELO3C024085.2 Cucumis melo HOM05D006270 ORTHO05D007755 3.0e-20 103.2 222 33.3
MBI06_g06704_MAGBIO Magnolia biondii HOM05D006270 ORTHO05D007755 3.9e-20 102.8 144 43.8
Zm00001eb304740 Zea mays HOM05D006270 ORTHO05D007755 1.4e-17 94.4 132 43.9
MD01G1220200 Malus domestica HOM05D006270 ORTHO05D007755 2.4e-17 93.6 73 64.4
SEGI_26224 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 3.4e-16 89.7 74 63.5
Cre06.g269100 Chlamydomonas reinhardtii HOM05D006270 ORTHO05D007755 8.5e-15 85.1 108 39.8
GSVIVG01026021001 Vitis vinifera HOM05D000026 ORTHO05D001436 3.6e-13 79.7 52 73.1
Ah.05g178770 Amaranthus hybridus HOM05D006270 ORTHO05D007755 2.3e-12 77.0 134 40.3
AagrBONN_evm.TU.Sc2ySwM_228.4762 Anthoceros agrestis HOM05D006270 ORTHO05D007755 7.4e-11 72.0 148 33.8
MCO16G519 Micromonas commoda HOM05D006270 ORTHO05D007755 1.0e-07 61.6 88 36.4
SEGI_16930 Sequoiadendron giganteum HOM05D005733 ORTHO05D007442 3.2e-06 56.6 78 32.1
MCO13G231 Micromonas commoda HOM05D005733 ORTHO05D006928 5.5e-06 55.8 80 35.0
Cre16.g657150 Chlamydomonas reinhardtii HOM05D006270 ORTHO05D007755 7.2e-06 55.5 114 33.3


User provided reference genes

Program Settings