Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.16G070000 Carya illinoinensis HOM05D007591 ORTHO05D009564 2.1e-54 215.7 127 100.0
Haze_18422 Corylus avellana HOM05D007591 ORTHO05D009564 4.0e-42 174.9 128 78.9
QL07p035218 Quercus lobata HOM05D007591 ORTHO05D009564 1.1e-34 150.2 128 72.7
Prupe.5G241900 Prunus persica HOM05D007591 ORTHO05D009564 7.1e-31 137.5 129 68.2
Peaxi162Scf00171g00034 Petunia axillaris HOM05D007591 ORTHO05D009564 1.0e-29 133.7 127 64.6
Sc10g0009060 Simmondsia chinensis HOM05D007591 ORTHO05D009564 1.3e-29 133.3 124 61.3
MSTRG.23207 Avicennia marina HOM05D007591 ORTHO05D009564 3.0e-29 132.1 127 58.3
EL10Ac8g19512 Beta vulgaris HOM05D007591 ORTHO05D009564 3.0e-29 132.1 130 70.0
Nitab4.5_0004612g0010 Nicotiana tabacum HOM05D007591 ORTHO05D009564 3.0e-29 132.1 127 62.2
PGR083G0752 Punica granatum HOM05D007591 ORTHO05D009564 3.9e-29 131.7 127 59.8
Psat0s3092g0040 Pisum sativum HOM05D007591 ORTHO05D009564 8.7e-29 130.6 127 63.0
CAN.G1909.5 Capsicum annuum HOM05D007591 ORTHO05D009564 1.1e-28 130.2 129 61.2
FvH4_5g18200 Fragaria vesca HOM05D007591 ORTHO05D009564 1.1e-28 130.2 129 63.6
FAN04G1638 Fragaria x ananassa HOM05D007591 ORTHO05D009564 1.5e-28 129.8 126 61.9
MELO3C001953.2 Cucumis melo HOM05D007591 ORTHO05D009564 3.3e-28 128.6 130 66.9
Nitab4.5_0001180g0270 Nicotiana tabacum HOM05D007591 ORTHO05D009564 3.3e-28 128.6 127 59.8
Potri.004G068400 Populus trichocarpa HOM05D007591 ORTHO05D009564 3.3e-28 128.6 127 57.5
THA.LOC104817210 Tarenaya hassleriana HOM05D007591 ORTHO05D009564 3.3e-28 128.6 128 68.0
Ah.09g232230 Amaranthus hybridus HOM05D007591 ORTHO05D009564 5.6e-28 127.9 133 60.2
Gohir.A02G020402 Gossypium hirsutum HOM05D007591 ORTHO05D009564 5.6e-28 127.9 128 58.6
TWI15G0768 Tripterygium wilfordii HOM05D007591 ORTHO05D009564 5.6e-28 127.9 128 68.8
TAR622G1019 Trochodendron aralioides HOM05D007591 ORTHO05D009564 5.6e-28 127.9 127 66.9
CsaV3_1G005150 Cucumis sativus L. HOM05D007591 ORTHO05D009564 7.4e-28 127.5 130 64.6
FAN13G0294 Fragaria x ananassa HOM05D007591 ORTHO05D009564 7.4e-28 127.5 126 62.7
Nn3g18513 Nelumbo nucifera HOM05D007591 ORTHO05D009564 1.3e-27 126.7 127 62.2
ECA234G2981 Erigeron canadensis HOM05D007591 ORTHO05D009564 1.6e-27 126.3 127 66.9
Gohir.D02G024000 Gossypium hirsutum HOM05D007591 ORTHO05D009564 1.6e-27 126.3 128 57.0
Gorai.005G030000 Gossypium raimondii HOM05D007591 ORTHO05D009564 1.6e-27 126.3 128 57.0
Actinidia35144 Actinidia chinensis HOM05D007591 ORTHO05D009564 2.8e-27 125.6 128 54.7
Cc04_g08740 Coffea canephora HOM05D007591 ORTHO05D009564 3.7e-27 125.2 127 63.0
Hma1.2p1_1404F.1_g281340 Hydrangea macrophylla HOM05D007591 ORTHO05D009564 3.7e-27 125.2 127 63.0
Medtr6g036570 Medicago truncatula HOM05D007591 ORTHO05D009564 3.7e-27 125.2 128 64.8
Cpa.g.sc36.38 Carica papaya HOM05D007591 ORTHO05D009564 4.8e-27 124.8 127 67.7
Ca_25920_v3 Cicer arietinum L. HOM05D007591 ORTHO05D009564 4.8e-27 124.8 128 64.8
ClCG04G012550 Citrullus lanatus HOM05D007591 ORTHO05D009564 4.8e-27 124.8 128 64.8
Dinv01404 Davidia involucrata HOM05D007591 ORTHO05D009564 4.8e-27 124.8 127 54.3
Duzib091G0002 Durio zibethinus HOM05D007591 ORTHO05D009564 4.8e-27 124.8 128 59.4
Glyma.08G057500 Glycine max HOM05D007591 ORTHO05D009564 4.8e-27 124.8 130 66.9
Solyc03g098410.1 Solanum lycopersicum HOM05D007591 ORTHO05D009564 4.8e-27 124.8 127 59.1
Sopen03g029150 Solanum pennellii HOM05D007591 ORTHO05D009564 4.8e-27 124.8 127 59.1
Aa31LG6G9200 Aethionema arabicum HOM05D007591 ORTHO05D009564 6.2e-27 124.4 127 56.7
PSO063G6315 Papaver somniferum HOM05D007591 ORTHO05D009564 8.2e-27 124.0 130 63.8
Sed0023620 Sechium edule HOM05D007591 ORTHO05D009564 1.1e-26 123.6 130 63.1
PGSC0003DMG400010159 Solanum tuberosum HOM05D007591 ORTHO05D009564 1.1e-26 123.6 127 58.3
Phvul.002G333300 Phaseolus vulgaris HOM05D007591 ORTHO05D009564 1.4e-26 123.2 138 64.5
Aqoxy3G04178 Aquilegia oxysepala HOM05D007591 ORTHO05D009564 1.8e-26 122.9 129 63.6
CSS0020209 Camellia sinensis var. sinensis HOM05D007591 ORTHO05D009564 1.8e-26 122.9 132 56.8
Eucgr.H00568 Eucalyptus grandis HOM05D007591 ORTHO05D009564 2.4e-26 122.5 136 58.8
MD14G1244400 Malus domestica HOM05D007591 ORTHO05D009564 2.4e-26 122.5 128 67.2
Oeu001600.1 Olea europaea HOM05D007591 ORTHO05D009564 2.4e-26 122.5 127 53.5
HanXRQChr17g0560331 Helianthus annuus HOM05D007591 ORTHO05D009564 3.1e-26 122.1 126 57.1
MBI06_g28831_MAGBIO Magnolia biondii HOM05D007591 ORTHO05D009564 4.0e-26 121.7 130 56.2
DCAR_014000 Daucus carota HOM05D007591 ORTHO05D009564 9.0e-26 120.6 128 60.9
Sabra04G0046100 Salix brachista HOM05D007591 ORTHO05D009564 9.0e-26 120.6 124 54.0
arahy.Tifrunner.gnm1.ann1.T0CPW9 Arachis hypogaea HOM05D007591 ORTHO05D009564 1.2e-25 120.2 122 64.8
Thecc.04G198100 Theobroma cacao HOM05D007591 ORTHO05D009564 1.2e-25 120.2 127 64.6
FAN18G3921 Fragaria x ananassa HOM05D007591 ORTHO05D009564 2.0e-25 119.4 131 59.5
Thhalv10011878m.g Eutrema salsugineum HOM05D007591 ORTHO05D009564 2.6e-25 119.0 127 57.5
RcHm_v2.0_Chr7g0177391 Rosa chinensis HOM05D007591 ORTHO05D009564 2.6e-25 119.0 133 57.1
SHI12607 Sapria himalayana HOM05D007591 ORTHO05D009564 3.4e-25 118.6 130 53.8
C04p45070 Brassica napus HOM05D007591 ORTHO05D009564 5.8e-25 117.9 127 59.8
BolC4t26085H Brassica oleracea HOM05D007591 ORTHO05D009564 5.8e-25 117.9 127 59.8
HPP92_005097 Vanilla planifolia HOM05D007591 ORTHO05D009564 5.8e-25 117.9 135 53.3
Atru.chr9.1591 Acer truncatum HOM05D007591 ORTHO05D009564 1.7e-24 116.3 135 60.7
ATR0807G077 Amborella trichopoda HOM05D007591 ORTHO05D009564 1.7e-24 116.3 127 56.7
COL.COLO4_20200 Corchorus olitorius HOM05D007591 ORTHO05D009564 1.7e-24 116.3 128 65.6
Migut.O00251 Erythranthe guttata HOM05D007591 ORTHO05D009564 2.2e-24 115.9 127 59.1
Lalb_Chr05g0221361 Lupinus albus HOM05D007591 ORTHO05D009564 2.2e-24 115.9 130 64.6
Manes.02G219300 Manihot esculenta HOM05D007591 ORTHO05D009564 2.2e-24 115.9 127 59.8
SpUn0008_0030 Schrenkiella parvula HOM05D007591 ORTHO05D009564 2.9e-24 115.5 127 58.3
Lsat_1_v5_gn_4_52441 Lactuca sativa HOM05D007591 ORTHO05D009564 6.5e-24 114.4 130 63.1
SalBow5G5001 Salvia bowleyana HOM05D007591 ORTHO05D009564 6.5e-24 114.4 127 56.7
CARHR134910 Cardamine hirsuta HOM05D007591 ORTHO05D009564 1.9e-23 112.8 130 56.2
Rhsim12G0136500 Rhododendron simsii HOM05D007591 ORTHO05D009564 1.9e-23 112.8 126 62.7
LjContig00484g0016765 Lotus japonicus HOM05D007591 ORTHO05D009564 2.5e-23 112.5 131 61.8
arahy.Tifrunner.gnm1.ann1.B1XHC0 Arachis hypogaea HOM05D007591 ORTHO05D009564 3.2e-23 112.1 122 66.4
AL4G17330 Arabidopsis lyrata HOM05D007591 ORTHO05D009564 4.2e-23 111.7 127 57.5
A04p11310 Brassica napus HOM05D007591 ORTHO05D009564 7.1e-23 110.9 127 55.9
BraA04t16792Z Brassica rapa HOM05D007591 ORTHO05D009564 7.1e-23 110.9 127 55.9
BcaB06g27212 Brassica carinata HOM05D007591 ORTHO05D009564 1.2e-22 110.2 127 56.7
Carub.0001s3401 Capsella rubella HOM05D007591 ORTHO05D009564 4.6e-22 108.2 124 50.8
AT2G25720 Arabidopsis thaliana HOM05D007591 ORTHO05D009564 6.0e-22 107.8 127 55.9
Ciclev10022902m.g Citrus clementina HOM05D007591 ORTHO05D009564 1.8e-21 106.3 128 60.9
unitig_22.g5435 Utricularia gibba HOM05D007591 ORTHO05D009564 2.8e-19 99.0 118 53.4
SEGI_35599 Sequoiadendron giganteum HOM05D007591 ORTHO05D009564 1.1e-18 97.1 127 45.7
AUR62008565 Chenopodium quinoa HOM05D007591 ORTHO05D009564 1.4e-18 96.7 129 47.3
Zm00001eb429080 Zea mays HOM05D007591 ORTHO05D009564 2.6e-17 92.4 133 44.4
AUR62033202 Chenopodium quinoa HOM05D007591 ORTHO05D009564 4.5e-17 91.7 59 79.7
CDE07G1474 Ceratophyllum demersum HOM05D007591 ORTHO05D009564 3.8e-16 88.6 112 50.0
SpUn0123_0020 Schrenkiella parvula HOM05D007591 ORTHO05D009564 4.2e-15 85.1 58 69.0
Pp3c23_22030 Physcomitrium patens HOM05D007591 ORTHO05D009564 1.4e-13 80.1 133 47.4
THA.LOC104813140 Tarenaya hassleriana HOM05D007591 ORTHO05D009564 3.0e-13 79.0 81 53.1
Medtr6g036573 Medicago truncatula HOM05D007591 ORTHO05D009564 6.7e-13 77.8 42 83.3
Mapoly0020s0124 Marchantia polymorpha HOM05D007591 ORTHO05D009564 3.3e-12 75.5 135 39.3
CAN.G1909.8 Capsicum annuum HOM05D007591 ORTHO05D009564 5.7e-12 74.7 67 58.2
Atru.chr5.956 Acer truncatum HOM05D007591 ORTHO05D009564 1.7e-11 73.2 69 59.4
Os04g0566000 Oryza sativa ssp. japonica HOM05D007591 ORTHO05D009564 1.4e-10 70.1 48 70.8
CBR_g12703 Chara braunii HOM05D007591 ORTHO05D009564 1.9e-07 59.7 137 39.4


User provided reference genes

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