Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.16G067300 Carya illinoinensis HOM05D006118 ORTHO05D007750 6.4e-182 640.6 314 100.0
Thecc.04G313700 Theobroma cacao HOM05D006118 ORTHO05D007750 9.3e-165 583.6 314 88.2
Gorai.005G073100 Gossypium raimondii HOM05D006118 ORTHO05D007750 8.7e-163 577.0 314 87.6
Gohir.A02G058900 Gossypium hirsutum HOM05D006118 ORTHO05D007750 1.5e-162 576.2 314 87.9
Gohir.D02G064600 Gossypium hirsutum HOM05D006118 ORTHO05D007750 2.5e-162 575.5 314 87.6
GSVIVG01035487001 Vitis vinifera HOM05D006118 ORTHO05D007750 3.4e-159 565.1 313 86.3
MD08G1073200 Malus domestica HOM05D006118 ORTHO05D007750 5.8e-159 564.3 314 85.4
CANSAT25G1353 Cannabis sativa HOM05D006118 ORTHO05D007750 2.9e-158 562.0 317 86.8
Ciclev10005468m.g Citrus clementina HOM05D006118 ORTHO05D007750 2.9e-158 562.0 314 86.0
Cpa.g.sc146.16 Carica papaya HOM05D006118 ORTHO05D007750 9.3e-157 557.0 314 84.4
RcHm_v2.0_Chr6g0312021 Rosa chinensis HOM05D006118 ORTHO05D007750 1.2e-156 556.6 314 84.7
Prupe.1G402500 Prunus persica HOM05D006118 ORTHO05D007750 2.1e-156 555.8 314 84.7
CsaV3_4G036130 Cucumis sativus L. HOM05D006118 ORTHO05D007750 3.5e-156 555.1 312 85.6
FvH4_2g30820 Fragaria vesca HOM05D006118 ORTHO05D007750 6.0e-156 554.3 314 85.0
FAN20G1786 Fragaria x ananassa HOM05D006118 ORTHO05D007750 6.0e-156 554.3 314 85.0
MELO3C016921.2 Cucumis melo HOM05D006118 ORTHO05D007750 1.0e-155 553.5 312 85.3
FAN27G1493 Fragaria x ananassa HOM05D006118 ORTHO05D007750 5.1e-155 551.2 314 84.7
ClCG05G015850 Citrullus lanatus HOM05D006118 ORTHO05D007750 6.7e-155 550.8 312 84.9
FAN15G2451 Fragaria x ananassa HOM05D006118 ORTHO05D007750 6.7e-155 550.8 314 84.4
arahy.Tifrunner.gnm1.ann1.ZI0SGT Arachis hypogaea HOM05D006118 ORTHO05D007750 3.3e-154 548.5 312 83.3
MD15G1048100 Malus domestica HOM05D006118 ORTHO05D007750 4.3e-154 548.1 314 83.1
Duzib151G0955 Durio zibethinus HOM05D006118 ORTHO05D007750 4.8e-153 544.7 294 87.1
TAR624G0180 Trochodendron aralioides HOM05D006118 ORTHO05D007750 1.8e-152 542.7 314 83.4
Atru.chr4.3167 Acer truncatum HOM05D006118 ORTHO05D007750 4.1e-152 541.6 314 82.2
arahy.Tifrunner.gnm1.ann1.Z643MN Arachis hypogaea HOM05D006118 ORTHO05D007750 4.5e-151 538.1 322 80.4
Glyma.17G219300 Glycine max HOM05D006118 ORTHO05D007750 5.8e-151 537.7 312 81.7
Phvul.001G044800 Phaseolus vulgaris HOM05D006118 ORTHO05D007750 1.7e-150 536.2 312 81.1
Sed0026686 Sechium edule HOM05D006118 ORTHO05D007750 2.9e-150 535.4 310 82.6
Migut.E01785 Erythranthe guttata HOM05D006118 ORTHO05D007750 5.0e-150 534.6 317 81.7
Eucgr.C00739 Eucalyptus grandis HOM05D006118 ORTHO05D007750 6.5e-150 534.3 309 82.8
Lj5g0024511 Lotus japonicus HOM05D006118 ORTHO05D007750 1.4e-149 533.1 314 81.2
Ca_13095_v3 Cicer arietinum L. HOM05D006118 ORTHO05D007750 2.5e-149 532.3 314 80.9
Sabra08G0153100 Salix brachista HOM05D006118 ORTHO05D007750 9.3e-149 530.4 323 80.8
Carub.0001s3740 Capsella rubella HOM05D006118 ORTHO05D007750 1.6e-148 529.6 319 81.2
AT1G48270 Arabidopsis thaliana HOM05D006118 ORTHO05D007750 2.7e-148 528.9 319 80.9
AL1G54870 Arabidopsis lyrata HOM05D006118 ORTHO05D007750 1.3e-147 526.6 319 80.3
Manes.03G212200 Manihot esculenta HOM05D006118 ORTHO05D007750 2.3e-147 525.8 314 82.2
Lalb_Chr24g0393681 Lupinus albus HOM05D006118 ORTHO05D007750 3.9e-147 525.0 312 80.8
CARHR037890 Cardamine hirsuta HOM05D006118 ORTHO05D007750 6.7e-147 524.2 320 80.6
PSO063G1448 Papaver somniferum HOM05D006118 ORTHO05D007750 8.7e-147 523.9 310 81.0
Hma1.2p1_0641F.1_g194200 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 7.4e-146 520.8 305 82.3
Cc08_g01010 Coffea canephora HOM05D006118 ORTHO05D007750 9.7e-146 520.4 320 79.4
PGSC0003DMG402012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 9.7e-146 520.4 315 81.6
Sp1g35230 Schrenkiella parvula HOM05D006118 ORTHO05D007750 3.7e-145 518.5 321 78.8
BolC6t35406H Brassica oleracea HOM05D006118 ORTHO05D007750 4.8e-145 518.1 320 79.1
Thhalv10011644m.g Eutrema salsugineum HOM05D006118 ORTHO05D007750 6.3e-145 517.7 321 78.8
PSO421G0086 Papaver somniferum HOM05D006118 ORTHO05D007750 1.4e-144 516.5 310 80.3
Solyc08g061260.4 Solanum lycopersicum HOM05D006118 ORTHO05D007750 2.4e-144 515.8 316 81.3
Sopen08g016640 Solanum pennellii HOM05D006118 ORTHO05D007750 2.4e-144 515.8 316 81.3
PGR142G4277 Punica granatum HOM05D006118 ORTHO05D007750 9.0e-144 513.8 311 81.0
HanXRQChr09g0261891 Helianthus annuus HOM05D006118 ORTHO05D007750 1.5e-143 513.1 318 78.0
BcaB07g33772 Brassica carinata HOM05D006118 ORTHO05D007750 2.6e-143 512.3 321 78.2
BcaC08g43024 Brassica carinata HOM05D006118 ORTHO05D007750 1.0e-142 510.4 321 77.9
C06p02770 Brassica napus HOM05D006118 ORTHO05D007750 1.0e-142 510.4 321 77.9
MSTRG.14088 Avicennia marina HOM05D006118 ORTHO05D007750 1.3e-142 510.0 315 78.4
A06p04570 Brassica napus HOM05D006118 ORTHO05D007750 3.8e-142 508.4 322 77.6
BraA06t23661Z Brassica rapa HOM05D006118 ORTHO05D007750 3.8e-142 508.4 322 77.6
Lsat_1_v5_gn_8_70541 Lactuca sativa HOM05D006118 ORTHO05D007750 1.4e-141 506.5 318 78.9
SGA_v2.0_scaffold163G37995 Striga asiatica HOM05D006118 ORTHO05D007750 1.9e-141 506.1 332 77.4
Rhsim13G0216900 Rhododendron simsii HOM05D006118 ORTHO05D007750 7.2e-141 504.2 317 78.2
Aqoxy7G01030 Aquilegia oxysepala HOM05D006118 ORTHO05D007750 1.6e-140 503.1 312 78.5
DCAR_003726 Daucus carota HOM05D006118 ORTHO05D007750 4.6e-140 501.5 327 74.9
CSS0045297 Camellia sinensis var. sinensis HOM05D006118 ORTHO05D007750 5.1e-139 498.0 280 85.7
Glyma.14G107200 Glycine max HOM05D006118 ORTHO05D007750 1.5e-138 496.5 278 85.3
VMungo0647G1968 Vigna mungo HOM05D006118 ORTHO05D007750 3.3e-138 495.4 276 85.1
THA.LOC104824720 Tarenaya hassleriana HOM05D006118 ORTHO05D007750 8.2e-137 490.7 316 78.2
Sc06g0000090 Simmondsia chinensis HOM05D006118 ORTHO05D007750 9.1e-136 487.3 311 76.5
TWI53G1421 Tripterygium wilfordii HOM05D006118 ORTHO05D007750 1.0e-134 483.8 315 77.8
Medtr1g015010 Medicago truncatula HOM05D006118 ORTHO05D007750 1.6e-132 476.5 312 75.6
vmacro04115 Vaccinium macrocarpon HOM05D006118 ORTHO05D007750 2.1e-132 476.1 381 65.1
Nitab4.5_0001576g0100 Nicotiana tabacum HOM05D006118 ORTHO05D007750 3.7e-129 465.3 314 75.5
SalBow1G5335 Salvia bowleyana HOM05D006118 ORTHO05D007750 7.7e-127 457.6 420 58.8
Dinv41849 Davidia involucrata HOM05D006118 ORTHO05D007750 1.0e-126 457.2 261 84.3
Actinidia01325 Actinidia chinensis HOM05D006118 ORTHO05D007750 1.6e-124 449.9 263 83.3
Aa31LG10G5490 Aethionema arabicum HOM05D006118 ORTHO05D007750 3.6e-124 448.7 319 72.4
Psat6g023080 Pisum sativum HOM05D006118 ORTHO05D007750 8.0e-124 447.6 279 79.2
Os06g0199800 Oryza sativa ssp. japonica HOM05D006118 ORTHO05D007750 1.0e-123 447.2 299 70.9
FAN24G3410 Fragaria x ananassa HOM05D006118 ORTHO05D007750 6.7e-123 444.5 254 82.3
COL.COLO4_34509 Corchorus olitorius HOM05D006118 ORTHO05D007750 1.5e-122 443.4 345 67.5
ECA236G0212 Erigeron canadensis HOM05D006118 ORTHO05D007750 9.7e-122 440.7 264 79.2
Potri.008G206000 Populus trichocarpa HOM05D006118 ORTHO05D007750 1.1e-120 437.2 294 74.5
Oeu036787.2 Olea europaea HOM05D006118 ORTHO05D007750 1.8e-120 436.4 274 77.7
CDE06G0461 Ceratophyllum demersum HOM05D006118 ORTHO05D007750 2.4e-120 436.0 293 72.7
Hma1.2p1_0641F.1_g194210 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 2.6e-119 432.6 250 82.0
TPR.G38901 Trifolium pratense HOM05D006118 ORTHO05D007750 2.1e-116 422.9 255 79.2
AagrBONN_evm.TU.Sc2ySwM_228.1339 Anthoceros agrestis HOM05D006118 ORTHO05D007750 1.0e-115 420.6 308 65.9
Haze_18321 Corylus avellana HOM05D006118 ORTHO05D007750 8.8e-115 417.5 643 42.3
AUR62020280 Chenopodium quinoa HOM05D006118 ORTHO05D007750 2.0e-114 416.4 300 72.0
Peaxi162Scf00486g00116 Petunia axillaris HOM05D006118 ORTHO05D007750 3.7e-113 412.1 312 68.3
Ah.12g061330 Amaranthus hybridus HOM05D006118 ORTHO05D007750 1.6e-111 406.8 309 66.7
Mapoly0073s0070 Marchantia polymorpha HOM05D006118 ORTHO05D007750 2.5e-109 399.4 305 63.9
EL10Ac2g02406 Beta vulgaris HOM05D006118 ORTHO05D007750 3.0e-107 392.5 314 64.6
Oeu024208.1 Olea europaea HOM05D006118 ORTHO05D007750 3.0e-107 392.5 247 77.7
Pp3c15_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 1.2e-106 390.6 297 62.6
Pp3c9_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 6.3e-105 384.8 296 62.5
Hund25545 Selenicereus undatus HOM05D006118 ORTHO05D007750 2.6e-98 362.8 278 67.6
SMO119G0499 Selaginella moellendorffii HOM05D006118 ORTHO05D007750 7.5e-98 361.3 264 65.5
AUR62037725 Chenopodium quinoa HOM05D006118 ORTHO05D007750 2.3e-94 349.7 264 68.2
ATR0598G044 Amborella trichopoda HOM05D006118 ORTHO05D007750 3.4e-90 335.9 208 78.4
HPP92_016236 Vanilla planifolia HOM05D006118 ORTHO05D007750 2.4e-88 329.7 310 56.8
arahy.Tifrunner.gnm1.ann1.C1NZN8 Arachis hypogaea HOM05D006118 ORTHO05D007750 1.1e-85 320.9 320 56.9
Lj7A209G43 Lonicera japonica HOM05D006118 ORTHO05D007750 2.1e-79 300.1 232 68.5
Zm00001eb278600 Zea mays HOM05D006118 ORTHO05D007750 5.1e-78 295.4 192 69.8
BcaB01g03835 Brassica carinata HOM05D006118 ORTHO05D007750 6.8e-75 285.0 191 74.9
CBR_g36835 Chara braunii HOM05D006118 ORTHO05D007750 6.4e-73 278.5 217 61.3
Nitab4.5_0009849g0030 Nicotiana tabacum HOM05D006118 ORTHO05D007750 9.6e-69 264.6 312 52.2
PGSC0003DMG401012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 5.8e-66 255.4 156 79.5
arahy.Tifrunner.gnm1.ann1.K6H74S Arachis hypogaea HOM05D006118 ORTHO05D007750 7.6e-66 255.0 163 74.8
BcaB08g36375 Brassica carinata HOM05D006118 ORTHO05D007750 7.6e-66 255.0 191 70.2
MD15G1048300 Malus domestica HOM05D006118 ORTHO05D007750 1.7e-62 243.8 236 58.1
unitig_8.g4842 Utricularia gibba HOM05D006118 ORTHO05D007750 1.9e-61 240.4 155 72.9
BcaB01g01553 Brassica carinata HOM05D006118 ORTHO05D007750 4.3e-53 212.6 145 71.0
BcaB07g32513 Brassica carinata HOM05D006118 ORTHO05D007750 2.1e-52 210.3 175 58.3
arahy.Tifrunner.gnm1.ann1.M0UG3B Arachis hypogaea HOM05D005235 ORTHO05D006938 7.1e-48 195.3 131 74.8
Lalb_Chr23g0268011 Lupinus albus HOM05D006118 ORTHO05D007750 4.5e-42 176.0 101 82.2
Lj7A209G42 Lonicera japonica HOM05D006118 ORTHO05D007750 4.2e-40 169.5 90 85.6
PRCOL_00005697 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 5.5e-32 142.5 275 31.3
PRCOL_00004868 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 1.2e-31 141.4 273 35.5
ATR0684G160 Amborella trichopoda HOM05D006118 ORTHO05D007750 3.6e-31 139.8 92 72.8
SEGI_23264 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 3.3e-29 133.3 80 77.5
MCO03G156 Micromonas commoda HOM05D006118 ORTHO05D007750 3.4e-18 96.7 358 26.5
Lalb_Chr23g0268021 Lupinus albus HOM05D006118 ORTHO05D007750 4.7e-15 86.3 158 38.6
MD15G1048200 Malus domestica HOM05D006118 ORTHO05D007750 2.6e-13 80.5 50 74.0
BcaB01g01552 Brassica carinata HOM05D006118 ORTHO05D007750 1.1e-11 75.1 54 74.1
SEGI_18851 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 5.3e-11 72.8 59 57.6
HPP92_016211 Vanilla planifolia HOM05D006118 ORTHO05D007750 2.1e-07 60.8 55 54.5
MSTRG.1710 Avicennia marina HOM05D006118 ORTHO05D007750 2.3e-06 57.4 65 49.2


User provided reference genes

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