Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.16G064400 Carya illinoinensis HOM05D007913 ORTHO05D009599 7.7e-74 280.4 143 100.0
CiPaw.16G064300 Carya illinoinensis HOM05D007913 ORTHO05D009599 9.1e-43 177.2 134 76.1
Haze_06126 Corylus avellana HOM05D007913 ORTHO05D009599 3.3e-16 89.0 121 47.9
Cfa000684 Carpinus fangiana HOM05D008124 ORTHO05D004072 1.5e-13 80.1 108 48.1
Ciclev10033117m.g Citrus clementina HOM05D013794 ORTHO05D009599 2.2e-12 76.3 135 42.2
Hma1.2p1_0061F.1_g034050 Hydrangea macrophylla HOM05D007913 ORTHO05D009599 2.4e-11 72.8 126 40.5
RcHm_v2.0_Chr4g0435331 Rosa chinensis HOM05D007913 ORTHO05D009599 1.6e-10 70.1 104 44.2
TAR629G2111 Trochodendron aralioides HOM05D007913 ORTHO05D009599 5.1e-09 65.1 128 39.1
Potri.008G119900 Populus trichocarpa HOM05D013794 ORTHO05D009599 6.6e-09 64.7 131 36.6
Atru.chr11.1275 Acer truncatum HOM05D007913 ORTHO05D009599 8.6e-09 64.3 95 46.3
Eucgr.G02329 Eucalyptus grandis HOM05D007913 ORTHO05D009599 1.1e-08 63.9 124 41.1
Peaxi162Scf00382g00034 Petunia axillaris HOM05D016979 ORTHO05D016853 1.5e-08 63.5 128 39.1
Sabra08G0090900 Salix brachista HOM05D013794 ORTHO05D009599 2.5e-08 62.8 85 45.9
Rhsim09G0108600 Rhododendron simsii HOM05D007913 ORTHO05D009599 3.3e-08 62.4 131 41.2
Duzib268G1152 Durio zibethinus HOM05D013794 ORTHO05D009599 7.3e-08 61.2 127 40.2
Rhsim09G0108800 Rhododendron simsii HOM05D007913 ORTHO05D009599 9.5e-08 60.8 129 41.9
COL.COLO4_07914 Corchorus olitorius HOM05D007913 ORTHO05D009599 1.6e-07 60.1 118 37.3
QL01p043322 Quercus lobata HOM05D013794 ORTHO05D009599 1.6e-07 60.1 98 45.9
Solyc05g009480.1 Solanum lycopersicum HOM05D016979 ORTHO05D016853 4.7e-07 58.5 102 36.3
Cc00_g12370 Coffea canephora HOM05D007913 ORTHO05D009599 6.2e-07 58.2 128 33.6
Duzib251G0161 Durio zibethinus HOM05D013794 ORTHO05D009599 6.2e-07 58.2 112 41.1
Thecc.02G356100 Theobroma cacao HOM05D013794 ORTHO05D009599 6.2e-07 58.2 134 40.3
Migut.E00331 Erythranthe guttata HOM05D007913 ORTHO05D009599 1.1e-06 57.4 121 37.2
Aqoxy3G00317 Aquilegia oxysepala HOM05D007913 ORTHO05D009599 1.4e-06 57.0 105 38.1
Ciclev10033073m.g Citrus clementina HOM05D007913 ORTHO05D009599 1.8e-06 56.6 127 37.8
FvH4_4g27501 Fragaria vesca HOM05D007913 ORTHO05D009599 1.8e-06 56.6 76 47.4
TAR371G0046 Trochodendron aralioides HOM05D007913 ORTHO05D009599 1.8e-06 56.6 127 37.0
CANSAT01G0283 Cannabis sativa HOM05D007913 ORTHO05D009599 2.4e-06 56.2 112 36.6
Nitab4.5_0000874g0170 Nicotiana tabacum HOM05D007913 ORTHO05D009599 2.4e-06 56.2 132 34.8
DCAR_030070 Daucus carota HOM05D007913 ORTHO05D009599 4.0e-06 55.5 108 41.7
Dinv04476 Davidia involucrata HOM05D007913 ORTHO05D009599 5.2e-06 55.1 119 35.3
FAN07G0452 Fragaria x ananassa HOM05D007913 ORTHO05D009599 5.2e-06 55.1 47 61.7
CSS0025071 Camellia sinensis var. sinensis HOM05D007913 ORTHO05D009599 6.8e-06 54.7 93 43.0
Nitab4.5_0003330g0030 Nicotiana tabacum HOM05D007913 ORTHO05D009599 8.9e-06 54.3 102 40.2
PGSC0003DMG400014558 Solanum tuberosum HOM05D007913 ORTHO05D009599 8.9e-06 54.3 97 42.3


User provided reference genes

Program Settings