Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.16G062200 Carya illinoinensis HOM05D007935 ORTHO05D007393 1.2e-76 290.0 178 100.0
Cfa018195 Carpinus fangiana HOM05D007935 ORTHO05D007393 2.4e-32 142.9 179 55.3
QL02p034017 Quercus lobata HOM05D007935 ORTHO05D007393 9.3e-29 131.0 187 46.0
Haze_17920 Corylus avellana HOM05D007935 ORTHO05D007393 3.9e-27 125.6 160 55.0
Potri.019G084500 Populus trichocarpa HOM05D007935 ORTHO05D007393 4.5e-23 112.1 188 41.0
Potri.013G114000 Populus trichocarpa HOM05D007935 ORTHO05D007393 3.8e-22 109.0 182 43.4
CiPaw.15G082200 Carya illinoinensis HOM05D007935 ORTHO05D007393 5.0e-22 108.6 177 53.1
Prupe.8G056300 Prunus persica HOM05D007935 ORTHO05D007393 2.5e-21 106.3 175 49.7
Sabra19G0095700 Salix brachista HOM05D007935 ORTHO05D007393 1.2e-20 104.0 179 37.4
CiPaw.15G082300 Carya illinoinensis HOM05D007935 ORTHO05D007393 2.7e-20 102.8 175 50.3
Lj2g0007380 Lotus japonicus HOM05D007935 ORTHO05D007393 1.0e-19 100.9 172 37.8
Atru.chr13.1798 Acer truncatum HOM05D007935 ORTHO05D007393 5.1e-19 98.6 177 53.1
Duzib177G0305 Durio zibethinus HOM05D007935 ORTHO05D007393 5.1e-19 98.6 173 38.7
Sabra13G0096500 Salix brachista HOM05D007935 ORTHO05D007393 1.5e-18 97.1 188 39.4
Thecc.08G181700 Theobroma cacao HOM05D007935 ORTHO05D007393 3.3e-18 95.9 165 40.0
Manes.02G191100 Manihot esculenta HOM05D007935 ORTHO05D007393 9.7e-18 94.4 178 39.9
Dinv08012 Davidia involucrata HOM05D007935 ORTHO05D007393 1.3e-17 94.0 168 40.5
Cpa.g.sc66.51 Carica papaya HOM05D007935 ORTHO05D007393 1.8e-16 90.1 173 39.3
Glyma.20G176200 Glycine max HOM05D007935 ORTHO05D007393 1.5e-15 87.0 169 37.3
Glyma.02G074300 Glycine max HOM05D007935 ORTHO05D007393 2.0e-15 86.7 173 36.4
Gohir.A09G117400 Gossypium hirsutum HOM05D007935 ORTHO05D007393 2.0e-15 86.7 179 39.7
COL.COLO4_16292 Corchorus olitorius HOM05D007935 ORTHO05D007393 2.6e-15 86.3 174 39.1
Glyma.10G215500 Glycine max HOM05D007935 ORTHO05D007393 2.6e-15 86.3 169 36.7
Gorai.006G131900 Gossypium raimondii HOM05D007935 ORTHO05D007393 3.4e-15 85.9 180 39.4
Phvul.004G084000 Phaseolus vulgaris HOM05D007935 ORTHO05D007393 3.4e-15 85.9 171 36.8
Gohir.D09G114200 Gossypium hirsutum HOM05D007935 ORTHO05D007393 5.9e-15 85.1 180 39.4
FAN12G0476 Fragaria x ananassa HOM05D007935 ORTHO05D007393 2.2e-14 83.2 169 36.1
Rhsim06G0096700 Rhododendron simsii HOM05D007935 ORTHO05D007393 6.5e-14 81.6 176 33.0
Manes.18G100400 Manihot esculenta HOM05D007935 ORTHO05D007393 8.5e-14 81.3 196 39.8
Glyma.16G156000 Glycine max HOM05D007935 ORTHO05D007393 1.1e-13 80.9 171 33.9
FvH4_4g19940 Fragaria vesca HOM05D007935 ORTHO05D007393 2.5e-13 79.7 169 36.1
Hma1.2p1_0363F.1_g136610 Hydrangea macrophylla HOM05D007935 ORTHO05D007393 2.1e-12 76.6 174 43.1
Lalb_Chr19g0129781 Lupinus albus HOM05D007935 ORTHO05D007393 2.7e-12 76.3 170 35.3
TWI32G0406 Tripterygium wilfordii HOM05D007935 ORTHO05D007393 4.7e-12 75.5 169 34.3
TAR628G0171 Trochodendron aralioides HOM05D007935 ORTHO05D007393 4.7e-12 75.5 177 33.9
FAN07G1822 Fragaria x ananassa HOM05D007935 ORTHO05D007393 6.1e-12 75.1 172 32.0
PGR102G0669 Punica granatum HOM05D007935 ORTHO05D007393 6.1e-12 75.1 173 31.2
Medtr1g096290 Medicago truncatula HOM05D007935 ORTHO05D007393 1.0e-11 74.3 173 33.5
Ciclev10003091m.g Citrus clementina HOM05D007935 ORTHO05D007393 1.4e-11 73.9 157 36.9
Nn5g27748 Nelumbo nucifera HOM05D007935 ORTHO05D007393 1.4e-11 73.9 180 31.7
TPR.G39557 Trifolium pratense HOM05D007935 ORTHO05D007393 1.4e-11 73.9 173 34.7
arahy.Tifrunner.gnm1.ann1.B1B3Q7 Arachis hypogaea HOM05D007935 ORTHO05D007393 2.3e-11 73.2 176 35.2
Nn1g08393 Nelumbo nucifera HOM05D007935 ORTHO05D007393 3.0e-11 72.8 180 30.6
Migut.C01245 Erythranthe guttata HOM05D007935 ORTHO05D007393 3.9e-11 72.4 171 34.5
TAR376G0933 Trochodendron aralioides HOM05D007935 ORTHO05D007393 6.7e-11 71.6 175 32.6
Dinv41698 Davidia involucrata HOM05D007935 ORTHO05D007393 8.8e-11 71.2 175 37.1
arahy.Tifrunner.gnm1.ann1.QZIQ5C Arachis hypogaea HOM05D007935 ORTHO05D007393 1.1e-10 70.9 177 34.5
Lalb_Chr01g0010021 Lupinus albus HOM05D007935 ORTHO05D007393 1.5e-10 70.5 174 33.3
Peaxi162Scf00310g00073 Petunia axillaris HOM05D007935 ORTHO05D007393 3.7e-09 65.9 191 38.2
RcHm_v2.0_Chr6g0272051 Rosa chinensis HOM05D007935 ORTHO05D007393 3.7e-09 65.9 169 32.0
Eucgr.F04128 Eucalyptus grandis HOM05D007935 ORTHO05D007393 4.8e-09 65.5 176 36.4
SalBow7G1894 Salvia bowleyana HOM05D007935 ORTHO05D007393 6.3e-09 65.1 170 30.0
Psat6g186560 Pisum sativum HOM05D007935 ORTHO05D007393 1.1e-08 64.3 171 32.2
Sopen11g009330 Solanum pennellii HOM05D007935 ORTHO05D007393 1.4e-08 63.9 164 34.8
PGSC0003DMG400009223 Solanum tuberosum HOM05D007935 ORTHO05D007393 1.4e-08 63.9 165 30.3
Solyc11g017390.2 Solanum lycopersicum HOM05D007935 ORTHO05D007393 3.1e-08 62.8 163 30.1
AUR62004654 Chenopodium quinoa HOM05D007935 ORTHO05D007393 4.1e-08 62.4 183 33.3
Sp5g26980 Schrenkiella parvula HOM05D010479 ORTHO05D007393 4.1e-08 62.4 177 33.3
Lj4P515T30 Lonicera japonica HOM05D007935 ORTHO05D007393 1.2e-07 60.8 85 42.4
Nitab4.5_0000422g0110 Nicotiana tabacum HOM05D007935 ORTHO05D007393 1.2e-07 60.8 198 36.4
Nitab4.5_0000560g0100 Nicotiana tabacum HOM05D007935 ORTHO05D007393 1.2e-07 60.8 184 28.3
Lj4P507T35 Lonicera japonica HOM05D007935 ORTHO05D007393 1.6e-07 60.5 85 42.4
Lj5g0011924 Lotus japonicus HOM05D007935 ORTHO05D007393 1.6e-07 60.5 174 28.2
arahy.Tifrunner.gnm1.ann1.DLN685 Arachis hypogaea HOM05D007935 ORTHO05D007393 2.0e-07 60.1 181 35.9
Sed0011111 Sechium edule HOM05D029613 ORTHO05D007393 2.6e-07 59.7 170 30.6
CSS0018652 Camellia sinensis var. sinensis HOM05D007935 ORTHO05D007393 3.5e-07 59.3 173 35.3
Thhalv10019217m.g Eutrema salsugineum HOM05D010479 ORTHO05D007393 3.5e-07 59.3 178 32.0
Manes.12G081400 Manihot esculenta HOM05D009958 ORTHO05D007393 7.7e-07 58.2 174 28.2
BcaB03g14909 Brassica carinata HOM05D010479 ORTHO05D007393 3.8e-06 55.8 175 29.1
BcaB03g14911 Brassica carinata HOM05D010479 ORTHO05D007393 3.8e-06 55.8 175 29.1
ClCG09G010460 Citrullus lanatus HOM05D029613 ORTHO05D007393 3.8e-06 55.8 175 38.3
FAN24G0793 Fragaria x ananassa HOM05D007935 ORTHO05D007393 8.5e-06 54.7 100 36.0


User provided reference genes

Program Settings