Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.16G046800 Carya illinoinensis HOM05D004348 ORTHO05D006191 1.9e-101 372.5 182 100.0
CiPaw.16G046500 Carya illinoinensis HOM05D004348 ORTHO05D006191 3.1e-96 355.1 182 95.6
Cfa018516 Carpinus fangiana HOM05D004348 ORTHO05D006191 3.6e-92 341.7 180 91.1
CsaV3_4G034150 Cucumis sativus L. HOM05D004348 ORTHO05D006191 8.2e-89 330.5 180 86.1
QL02p005708 Quercus lobata HOM05D004348 ORTHO05D006191 1.2e-87 326.6 180 86.7
ClCG05G019730 Citrullus lanatus HOM05D004348 ORTHO05D006191 2.6e-87 325.5 182 84.1
CANSAT78G0057 Cannabis sativa HOM05D004348 ORTHO05D006191 5.9e-87 324.3 181 85.1
TAR625G1112 Trochodendron aralioides HOM05D004348 ORTHO05D006191 3.8e-86 321.6 177 87.0
Gohir.A01G118500 Gossypium hirsutum HOM05D004348 ORTHO05D006191 6.5e-86 320.9 182 84.1
Sed0015301 Sechium edule HOM05D004348 ORTHO05D006191 8.5e-86 320.5 180 84.4
Gohir.D01G106800 Gossypium hirsutum HOM05D004348 ORTHO05D006191 1.5e-85 319.7 182 83.5
Gorai.002G131100 Gossypium raimondii HOM05D004348 ORTHO05D006191 1.9e-85 319.3 182 83.5
Aqoxy5G01277 Aquilegia oxysepala HOM05D004348 ORTHO05D006191 3.2e-85 318.5 181 84.0
Lj4A53T53 Lonicera japonica HOM05D004348 ORTHO05D006191 3.2e-85 318.5 182 81.9
Actinidia15256 Actinidia chinensis HOM05D004348 ORTHO05D006191 4.2e-85 318.2 180 82.2
Nitab4.5_0000068g0550 Nicotiana tabacum HOM05D004348 ORTHO05D006191 5.5e-85 317.8 178 84.8
Sed0012719 Sechium edule HOM05D004348 ORTHO05D006191 7.2e-85 317.4 180 82.2
Cpa.g.c24415.13 Carica papaya HOM05D004348 ORTHO05D006191 1.2e-84 316.6 181 82.9
Sopen04g032870 Solanum pennellii HOM05D004348 ORTHO05D006191 2.7e-84 315.5 178 84.3
AUR62022445 Chenopodium quinoa HOM05D004348 ORTHO05D006191 3.6e-84 315.1 182 81.3
AUR62039313 Chenopodium quinoa HOM05D004348 ORTHO05D006191 3.6e-84 315.1 182 81.3
PGSC0003DMG400007988 Solanum tuberosum HOM05D004348 ORTHO05D006191 3.6e-84 315.1 178 84.3
Ciclev10000175m.g Citrus clementina HOM05D004348 ORTHO05D006191 4.7e-84 314.7 182 80.8
Nn5g30212 Nelumbo nucifera HOM05D004348 ORTHO05D006191 4.7e-84 314.7 182 81.9
Prupe.1G440200 Prunus persica HOM05D004348 ORTHO05D006191 8.0e-84 313.9 180 82.8
Solyc04g079280.4 Solanum lycopersicum HOM05D004348 ORTHO05D006191 8.0e-84 313.9 178 83.7
arahy.Tifrunner.gnm1.ann1.2EEB7P Arachis hypogaea HOM05D004348 ORTHO05D006191 1.0e-83 313.5 182 83.0
arahy.Tifrunner.gnm1.ann1.3D95JG Arachis hypogaea HOM05D004348 ORTHO05D006191 1.0e-83 313.5 182 83.0
MD15G1086600 Malus domestica HOM05D004348 ORTHO05D006191 1.8e-83 312.8 178 82.0
GSVIVG01009553001 Vitis vinifera HOM05D004348 ORTHO05D006191 1.8e-83 312.8 181 81.2
Atru.chr1.1668 Acer truncatum HOM05D004348 ORTHO05D006191 2.3e-83 312.4 182 80.8
THA.LOC104806947 Tarenaya hassleriana HOM05D004348 ORTHO05D006191 2.3e-83 312.4 179 83.2
Atru.chr13.637 Acer truncatum HOM05D004348 ORTHO05D006191 3.0e-83 312.0 182 80.8
PGR031G2748 Punica granatum HOM05D004348 ORTHO05D006191 3.0e-83 312.0 182 81.3
Migut.N02696 Erythranthe guttata HOM05D004348 ORTHO05D006191 4.0e-83 311.6 181 79.6
MD08G1105600 Malus domestica HOM05D004348 ORTHO05D006191 5.2e-83 311.2 178 82.6
Manes.05G171200 Manihot esculenta HOM05D004348 ORTHO05D006191 5.2e-83 311.2 180 82.2
MELO3C016737.2 Cucumis melo HOM05D004348 ORTHO05D006191 6.7e-83 310.8 180 82.8
RcHm_v2.0_Chr6g0307221 Rosa chinensis HOM05D004348 ORTHO05D006191 6.7e-83 310.8 177 81.4
CAN.G371.44 Capsicum annuum HOM05D004348 ORTHO05D006191 8.8e-83 310.5 178 82.6
Hma1.2p1_0337F.1_g129300 Hydrangea macrophylla HOM05D004348 ORTHO05D006191 1.1e-82 310.1 182 79.1
Eucgr.F02367 Eucalyptus grandis HOM05D004348 ORTHO05D006191 2.0e-82 309.3 181 80.1
Sc02g0006980 Simmondsia chinensis HOM05D004348 ORTHO05D006191 2.6e-82 308.9 182 79.1
FvH4_2g34840 Fragaria vesca HOM05D004348 ORTHO05D006191 5.7e-82 307.8 177 80.8
FAN27G3414 Fragaria x ananassa HOM05D004348 ORTHO05D006191 5.7e-82 307.8 177 80.8
Rhsim06G0047100 Rhododendron simsii HOM05D004348 ORTHO05D006191 1.7e-81 306.2 174 83.9
Potri.014G034100 Populus trichocarpa HOM05D004348 ORTHO05D006191 2.8e-81 305.4 180 78.9
Lalb_Chr24g0399211 Lupinus albus HOM05D004348 ORTHO05D006191 3.7e-81 305.1 180 81.1
Phvul.001G020000 Phaseolus vulgaris HOM05D004348 ORTHO05D006191 3.7e-81 305.1 177 81.4
Cc10_g04460 Coffea canephora HOM05D004348 ORTHO05D006191 4.8e-81 304.7 179 80.4
HanXRQChr02g0038751 Helianthus annuus HOM05D004348 ORTHO05D006191 6.3e-81 304.3 180 80.6
EL10Ac1g01783 Beta vulgaris HOM05D004348 ORTHO05D006191 1.1e-80 303.5 182 78.0
DCAR_020931 Daucus carota HOM05D004348 ORTHO05D006191 1.4e-80 303.1 177 80.8
CARHR242470 Cardamine hirsuta HOM05D004348 ORTHO05D006191 2.4e-80 302.4 179 78.8
Lj5g0025546 Lotus japonicus HOM05D004348 ORTHO05D006191 2.4e-80 302.4 182 80.2
AL7G16960 Arabidopsis lyrata HOM05D004348 ORTHO05D006191 3.1e-80 302.0 179 79.3
AT4G34310 Arabidopsis thaliana HOM05D004348 ORTHO05D006191 3.1e-80 302.0 179 79.3
CSS0012651 Camellia sinensis var. sinensis HOM05D004348 ORTHO05D006191 5.3e-80 301.2 179 79.9
Thhalv10024246m.g Eutrema salsugineum HOM05D004348 ORTHO05D006191 7.0e-80 300.8 179 78.8
Oeu057258.1 Olea europaea HOM05D004348 ORTHO05D006191 7.0e-80 300.8 189 76.7
Carub.0007s0605 Capsella rubella HOM05D004348 ORTHO05D006191 9.1e-80 300.4 179 78.2
Psat6g012000 Pisum sativum HOM05D004348 ORTHO05D006191 9.1e-80 300.4 182 79.7
VMungo0647G0261 Vigna mungo HOM05D004348 ORTHO05D006191 1.6e-79 299.7 177 80.8
Medtr1g019960 Medicago truncatula HOM05D004348 ORTHO05D006191 3.5e-79 298.5 177 80.8
Sp7g32110 Schrenkiella parvula HOM05D004348 ORTHO05D006191 3.5e-79 298.5 179 78.2
A01p04110 Brassica napus HOM05D004348 ORTHO05D006191 4.5e-79 298.1 179 77.7
C01p04470 Brassica napus HOM05D004348 ORTHO05D006191 4.5e-79 298.1 179 77.7
BolC1t00433H Brassica oleracea HOM05D004348 ORTHO05D006191 4.5e-79 298.1 179 77.7
BraA01t00399Z Brassica rapa HOM05D004348 ORTHO05D006191 4.5e-79 298.1 179 77.7
Oeu003300.1 Olea europaea HOM05D004348 ORTHO05D006191 5.9e-79 297.7 198 72.7
vmacro21553 Vaccinium macrocarpon HOM05D004348 ORTHO05D006191 5.9e-79 297.7 181 77.3
CDE10G0798 Ceratophyllum demersum HOM05D004348 ORTHO05D006191 7.7e-79 297.4 178 79.2
Thecc.08G012500 Theobroma cacao HOM05D004348 ORTHO05D006191 1.3e-78 296.6 181 79.0
Lsat_1_v5_gn_4_124060 Lactuca sativa HOM05D004348 ORTHO05D006191 8.5e-78 293.9 179 77.7
ECA247G1923 Erigeron canadensis HOM05D004348 ORTHO05D006191 1.1e-77 293.5 178 78.1
Peaxi162Scf00528g00825 Petunia axillaris HOM05D004348 ORTHO05D006191 1.9e-77 292.7 178 79.2
unitig_26.g10060 Utricularia gibba HOM05D004348 ORTHO05D006191 5.5e-77 291.2 179 74.9
CDE10G0919 Ceratophyllum demersum HOM05D004348 ORTHO05D006191 9.4e-77 290.4 178 78.1
HanXRQChr16g0507461 Helianthus annuus HOM05D004348 ORTHO05D006191 8.0e-76 287.3 177 74.6
ATR1159G040 Amborella trichopoda HOM05D004348 ORTHO05D006191 5.2e-75 284.6 177 76.3
SGA_v2.0_scaffold226G43137 Striga asiatica HOM05D004348 ORTHO05D006191 1.5e-74 283.1 167 77.2
Os03g0185500 Oryza sativa ssp. japonica HOM05D004348 ORTHO05D006191 3.4e-74 282.0 176 74.4
MD08G1105800 Malus domestica HOM05D004348 ORTHO05D006191 1.7e-73 279.6 156 83.3
Hund26625 Selenicereus undatus HOM05D004348 ORTHO05D006191 2.7e-71 272.3 160 79.4
Dinv35980 Davidia involucrata HOM05D004348 ORTHO05D006191 2.2e-70 269.2 146 87.7
SEGI_07910 Sequoiadendron giganteum HOM05D004348 ORTHO05D006191 1.1e-69 266.9 170 75.3
Mapoly0033s0109 Marchantia polymorpha HOM05D004348 ORTHO05D006191 1.9e-69 266.2 178 71.9
HPP92_028299 Vanilla planifolia HOM05D004348 ORTHO05D006191 7.2e-69 264.2 156 76.9
COL.COLO4_26463 Corchorus olitorius HOM05D004348 ORTHO05D006191 1.4e-67 260.0 145 85.5
ECA232G4920 Erigeron canadensis HOM05D004348 ORTHO05D006191 1.4e-67 260.0 155 78.1
AagrBONN_evm.TU.Sc2ySwM_344.1636 Anthoceros agrestis HOM05D004348 ORTHO05D006191 5.2e-67 258.1 179 69.8
FAN15G1136 Fragaria x ananassa HOM05D004348 ORTHO05D006191 3.7e-65 251.9 145 80.0
Duzib093G0393 Durio zibethinus HOM05D004348 ORTHO05D006191 6.3e-65 251.1 146 82.9
Sabra14G0024200 Salix brachista HOM05D004348 ORTHO05D006191 1.8e-64 249.6 167 71.3
SMO144G0009 Selaginella moellendorffii HOM05D004348 ORTHO05D006191 3.1e-64 248.8 179 66.5
Pp3c17_5660 Physcomitrium patens HOM05D004348 ORTHO05D006191 1.2e-63 246.9 182 66.5
SHI08298 Sapria himalayana HOM05D004348 ORTHO05D006191 3.3e-61 238.8 145 78.6
Haze_17559 Corylus avellana HOM05D004348 ORTHO05D006191 1.6e-60 236.5 129 88.4
Glyma.14G081100 Glycine max HOM05D004348 ORTHO05D006191 3.6e-60 235.3 178 66.9
Lsat_1_v5_gn_1_20621 Lactuca sativa HOM05D004348 ORTHO05D006191 5.2e-59 231.5 128 82.0
PSO675G6987 Papaver somniferum HOM05D004348 ORTHO05D006191 1.4e-56 223.4 140 74.3
CBR_g45541 Chara braunii HOM05D004348 ORTHO05D006191 3.2e-56 222.2 177 58.8
Zm00001eb006390 Zea mays HOM05D004348 ORTHO05D006191 2.6e-50 202.6 175 61.1
Haze_18739 Corylus avellana HOM05D004348 ORTHO05D006191 1.9e-45 186.4 172 60.5
Aa31LG2G16180 Aethionema arabicum HOM05D004348 ORTHO05D006191 3.6e-44 182.2 115 75.7
HPP92_019296 Vanilla planifolia HOM05D004348 ORTHO05D006191 1.8e-43 179.9 113 74.3
TPR.G40548 Trifolium pratense HOM05D004348 ORTHO05D006191 2.9e-41 172.6 104 79.8
Ca_13305_v3 Cicer arietinum L. HOM05D004348 ORTHO05D006191 1.3e-38 163.7 145 60.0
Glyma.17G244300 Glycine max HOM05D004348 ORTHO05D006191 1.7e-30 136.7 79 78.5
TPR.G13698 Trifolium pratense HOM05D004348 ORTHO05D006191 8.6e-30 134.4 79 78.5
MSTRG.22274 Avicennia marina HOM05D004348 ORTHO05D006191 3.6e-28 129.0 83 69.9
PRCOL_00001182 Prasinoderma coloniale HOM05D004348 ORTHO05D006191 3.5e-23 112.5 205 35.6
Cre16.g686501 Chlamydomonas reinhardtii HOM05D004348 ORTHO05D006191 3.6e-20 102.4 182 39.0
SGA_v2.0_scaffold6G03459 Striga asiatica HOM05D004348 ORTHO05D006191 1.3e-12 77.4 46 76.1
Mapoly0064s0093 Marchantia polymorpha HOM05D004348 ORTHO05D000239 2.4e-11 73.2 183 31.1
HPP92_019297 Vanilla planifolia HOM05D004348 ORTHO05D006191 6.9e-11 71.6 57 57.9
Lsat_1_v5_gn_5_11760 Lactuca sativa HOM05D004348 ORTHO05D006191 4.5e-10 68.9 50 68.0
Lsat_1_v5_gn_8_33681 Lactuca sativa HOM05D004348 ORTHO05D006191 4.5e-10 68.9 50 68.0
Mapoly0200s0001 Marchantia polymorpha HOM05D004348 ORTHO05D000239 1.2e-07 60.8 183 24.6
Aa31LG2G16190 Aethionema arabicum HOM05D004348 ORTHO05D006191 2.1e-07 60.1 37 70.3
SGA_v2.0_scaffold162G37946 Striga asiatica HOM05D004348 ORTHO05D006191 1.0e-06 57.8 38 68.4
Lsat_1_v5_gn_9_17240 Lactuca sativa HOM05D004348 ORTHO05D006191 5.1e-06 55.5 43 65.1


User provided reference genes

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