Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.16G044700 Carya illinoinensis HOM05D015919 ORTHO05D004756 4.7e-68 261.2 140 100.0
CiPaw.11G130800 Carya illinoinensis HOM05D015919 ORTHO05D028665 4.0e-27 125.2 84 77.4
CiPaw.13G167900 Carya illinoinensis HOM05D015919 ORTHO05D004756 7.1e-24 114.4 83 74.7
QL01p026368 Quercus lobata HOM05D000002 ORTHO05D000001 7.9e-23 110.9 175 42.9
QL04p089373 Quercus lobata HOM05D000002 ORTHO05D000001 1.3e-22 110.2 175 43.4
QL03p000720 Quercus lobata HOM05D000002 ORTHO05D000001 6.7e-22 107.8 175 42.9
QL06p036226 Quercus lobata HOM05D000002 ORTHO05D000001 8.7e-22 107.5 175 42.9
QL02p084387 Quercus lobata HOM05D000002 ORTHO05D000001 1.9e-21 106.3 175 42.3
QL07p048797 Quercus lobata HOM05D000002 ORTHO05D000001 4.3e-21 105.1 175 42.3
QL11p002299 Quercus lobata HOM05D000002 ORTHO05D000001 2.1e-20 102.8 142 47.2
QL11p048818 Quercus lobata HOM05D000002 ORTHO05D000001 2.8e-20 102.4 142 46.5
TPR.G31083 Trifolium pratense HOM05D000002 ORTHO05D000001 9.0e-19 97.4 89 52.8
Rhsim05G0010500 Rhododendron simsii HOM05D002287 ORTHO05D002588 1.4e-16 90.1 83 51.8
Rhsim09G0089300 Rhododendron simsii HOM05D015919 ORTHO05D004756 1.3e-14 83.6 139 38.8
Psat5g083800 Pisum sativum HOM05D007230 ORTHO05D004756 3.0e-14 82.4 86 46.5
Psat1g072080 Pisum sativum HOM05D007230 ORTHO05D004756 8.7e-14 80.9 162 35.2
Psat7g056280 Pisum sativum HOM05D007230 ORTHO05D004756 8.7e-14 80.9 162 35.2
Psat5g096840 Pisum sativum HOM05D007230 ORTHO05D004756 1.3e-12 77.0 148 37.2
Sabra18G0086500 Salix brachista HOM05D007230 ORTHO05D004756 1.6e-12 76.6 130 40.8
SHI31302 Sapria himalayana HOM05D000002 ORTHO05D000001 4.8e-12 75.1 143 37.8
SHI35844 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-11 73.6 92 43.5
SHI02604 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-11 73.2 92 43.5
SHI07621 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-11 73.2 92 43.5
SHI29623 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-11 73.2 92 43.5
SHI16498 Sapria himalayana HOM05D000002 ORTHO05D000001 2.4e-11 72.8 92 42.4
SHI15740 Sapria himalayana HOM05D000002 ORTHO05D000001 3.1e-11 72.4 92 42.4
SHI02112 Sapria himalayana HOM05D000002 ORTHO05D000001 5.3e-11 71.6 92 42.4
SHI06223 Sapria himalayana HOM05D000002 ORTHO05D000001 9.0e-11 70.9 92 42.4
SHI31374 Sapria himalayana HOM05D000002 ORTHO05D000001 9.0e-11 70.9 92 42.4
Ca_07477_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.2e-10 70.5 83 39.8
SHI11999 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-10 70.5 92 41.3
SHI17243 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-10 70.5 92 42.4
SHI20448 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-10 70.5 92 41.3
SHI32448 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-10 70.5 92 42.4
SHI41657 Sapria himalayana HOM05D000002 ORTHO05D004756 1.2e-10 70.5 92 42.4
SHI28040 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-10 70.1 92 42.4
SHI50483 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-10 70.1 92 41.3
SHI45863 Sapria himalayana HOM05D000002 ORTHO05D000001 2.0e-10 69.7 92 41.3
SHI49499 Sapria himalayana HOM05D000002 ORTHO05D000001 2.0e-10 69.7 92 41.3
Ca_14578_v3 Cicer arietinum L. HOM05D000338 ORTHO05D000704 2.6e-10 69.3 83 38.6
SHI44660 Sapria himalayana HOM05D000002 ORTHO05D000001 2.6e-10 69.3 92 41.3
SHI54737 Sapria himalayana HOM05D000002 ORTHO05D000001 2.6e-10 69.3 92 41.3
SHI12633 Sapria himalayana HOM05D000002 ORTHO05D004756 3.4e-10 68.9 92 42.4
SHI45992 Sapria himalayana HOM05D000002 ORTHO05D000001 4.5e-10 68.6 92 41.3
SHI24644 Sapria himalayana HOM05D000002 ORTHO05D000001 5.9e-10 68.2 92 40.2
SHI26639 Sapria himalayana HOM05D000002 ORTHO05D000001 5.9e-10 68.2 92 41.3
SHI53716 Sapria himalayana HOM05D000002 ORTHO05D000001 5.9e-10 68.2 92 40.2
Ca_03884_v3 Cicer arietinum L. HOM05D007908 ORTHO05D009653 7.6e-10 67.8 84 44.0
QL05p086220 Quercus lobata HOM05D000002 ORTHO05D000001 1.3e-09 67.0 83 42.2
QL04p097278 Quercus lobata HOM05D000002 ORTHO05D000001 1.7e-09 66.6 83 42.2
QL08p048522 Quercus lobata HOM05D000002 ORTHO05D000001 1.7e-09 66.6 83 42.2
QL10p052423 Quercus lobata HOM05D000002 ORTHO05D000001 1.7e-09 66.6 83 42.2
QL11p016059 Quercus lobata HOM05D000002 ORTHO05D000001 1.7e-09 66.6 83 42.2
SHI39742 Sapria himalayana HOM05D000002 ORTHO05D000001 2.2e-09 66.2 92 41.3
QL02p069342 Quercus lobata HOM05D000002 ORTHO05D000001 2.9e-09 65.9 83 42.2
QL09p018296 Quercus lobata HOM05D000002 ORTHO05D000001 3.8e-09 65.5 83 41.0
QL05p087852 Quercus lobata HOM05D000002 ORTHO05D000001 5.0e-09 65.1 141 36.2
SHI46656 Sapria himalayana HOM05D000002 ORTHO05D000001 6.5e-09 64.7 93 44.1
Ca_22576_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.1e-08 63.9 70 40.0
SHI23035 Sapria himalayana HOM05D000002 ORTHO05D026106 1.1e-08 63.9 73 47.9
QL09p045529 Quercus lobata HOM05D000002 ORTHO05D000001 1.4e-08 63.5 83 42.2
QL06p020360 Quercus lobata HOM05D000002 ORTHO05D000001 1.9e-08 63.2 132 33.3
QL08p016914 Quercus lobata HOM05D002077 ORTHO05D000818 1.9e-08 63.2 148 37.2
QL08p017090 Quercus lobata HOM05D002077 ORTHO05D000818 1.9e-08 63.2 148 37.2
QL07p008129 Quercus lobata HOM05D000002 ORTHO05D000001 4.2e-08 62.0 95 36.8
QL09p053670 Quercus lobata HOM05D000002 ORTHO05D000001 5.5e-08 61.6 132 33.3
QL12p040136 Quercus lobata HOM05D000002 ORTHO05D000001 5.5e-08 61.6 132 33.3
SHI40782 Sapria himalayana HOM05D000002 ORTHO05D000001 5.5e-08 61.6 157 36.3
QL10p050039 Quercus lobata HOM05D000002 ORTHO05D000001 1.6e-07 60.1 132 31.8
MELO3C031997.2 Cucumis melo HOM05D015919 ORTHO05D004756 2.1e-07 59.7 55 47.3
SHI36896 Sapria himalayana HOM05D000002 ORTHO05D000001 4.6e-07 58.5 92 38.0
QL06p020658 Quercus lobata HOM05D000002 ORTHO05D000001 6.1e-07 58.2 132 31.8
Rhsim12G0169100 Rhododendron simsii HOM05D015919 ORTHO05D004756 6.1e-07 58.2 50 56.0
Rhsim07G0087400 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.0e-06 57.4 55 49.1
QL05p070253 Quercus lobata HOM05D000002 ORTHO05D000001 3.0e-06 55.8 132 31.1
Sabra15G0112800 Salix brachista HOM05D005223 ORTHO05D000001 5.1e-06 55.1 82 41.5
Atru.chr3.2571 Acer truncatum HOM05D000002 ORTHO05D004756 6.7e-06 54.7 70 38.6
CANSAT54G1669 Cannabis sativa HOM05D000002 ORTHO05D000001 6.7e-06 54.7 68 41.2
CiPaw.01G099900 Carya illinoinensis HOM05D015919 ORTHO05D028665 8.7e-06 54.3 81 37.0


User provided reference genes

Program Settings