Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.16G035600 Carya illinoinensis HOM05D000003 ORTHO05D000004 4.0e-75 284.6 139 100.0
CiPaw.03G190200 Carya illinoinensis HOM05D000003 ORTHO05D000167 6.6e-54 214.2 137 77.4
CiPaw.16G069900 Carya illinoinensis HOM05D000003 ORTHO05D000004 6.8e-27 124.4 137 43.8
CiPaw.07G069100 Carya illinoinensis HOM05D000003 ORTHO05D000167 3.7e-25 118.6 123 48.8
CiPaw.14G093100 Carya illinoinensis HOM05D000003 ORTHO05D000004 5.6e-21 104.8 138 37.0
Haze_05255 Corylus avellana HOM05D000111 ORTHO05D001334 7.3e-21 104.4 131 39.7
CiPaw.15G051200 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.4e-19 100.1 138 31.9
CiPaw.16G041700 Carya illinoinensis HOM05D000003 ORTHO05D000004 3.1e-19 99.0 138 37.0
CiPaw.10G106100 Carya illinoinensis HOM05D000003 ORTHO05D000004 2.6e-18 95.9 126 37.3
CiPaw.05G068400 Carya illinoinensis HOM05D000003 ORTHO05D000004 3.4e-18 95.5 142 33.1
CiPaw.15G109000 Carya illinoinensis HOM05D000003 ORTHO05D000004 3.4e-18 95.5 137 32.8
CiPaw.11G073400 Carya illinoinensis HOM05D000003 ORTHO05D000004 5.8e-18 94.7 137 33.6
CiPaw.13G120800 Carya illinoinensis HOM05D000003 ORTHO05D013566 3.8e-17 92.0 109 41.3
CiPaw.03G161500 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.4e-16 90.1 132 36.4
CiPaw.11G093000 Carya illinoinensis HOM05D000003 ORTHO05D000004 2.4e-16 89.4 139 35.3
CiPaw.15G073500 Carya illinoinensis HOM05D000003 ORTHO05D000004 5.4e-16 88.2 142 32.4
CiPaw.06G023000 Carya illinoinensis HOM05D000003 ORTHO05D000004 2.7e-15 85.9 111 36.0
CiPaw.07G081000 Carya illinoinensis HOM05D000003 ORTHO05D000004 2.7e-15 85.9 141 31.9
CiPaw.08G120100 Carya illinoinensis HOM05D000003 ORTHO05D000004 2.7e-15 85.9 139 30.2
CiPaw.09G167800 Carya illinoinensis HOM05D000003 ORTHO05D000004 3.5e-15 85.5 132 34.8
CiPaw.01G080900 Carya illinoinensis HOM05D000003 ORTHO05D000004 4.6e-15 85.1 95 40.0
CiPaw.09G152300 Carya illinoinensis HOM05D000003 ORTHO05D000167 4.6e-15 85.1 132 37.1
CiPaw.07G085700 Carya illinoinensis HOM05D000003 ORTHO05D000004 6.0e-15 84.7 138 31.2
CiPaw.06G052300 Carya illinoinensis HOM05D000003 ORTHO05D000004 7.8e-15 84.3 139 31.7
CiPaw.01G096600 Carya illinoinensis HOM05D000003 ORTHO05D000167 1.3e-14 83.6 139 35.3
CiPaw.05G213600 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.7e-14 83.2 137 31.4
QL12p025805 Quercus lobata HOM05D000967 ORTHO05D000796 1.7e-14 83.2 106 36.8
CiPaw.16G076300 Carya illinoinensis HOM05D000003 ORTHO05D000004 3.9e-14 82.0 105 38.1
CiPaw.14G039600 Carya illinoinensis HOM05D000003 ORTHO05D000004 8.7e-14 80.9 139 32.4
QL01p005053 Quercus lobata HOM05D000003 ORTHO05D000004 1.1e-13 80.5 106 35.8
QL04p002075 Quercus lobata HOM05D000003 ORTHO05D000004 1.1e-13 80.5 110 34.5
QL11p053175 Quercus lobata HOM05D000003 ORTHO05D000004 1.1e-13 80.5 106 34.0
TWI18G0223 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.1e-13 80.5 146 32.9
TWI23G0529 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.1e-13 80.5 140 34.3
CiPaw.13G001400 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.9e-13 79.7 140 32.1
TWI14G0340 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.9e-13 79.7 142 34.5
CiPaw.15G062400 Carya illinoinensis HOM05D000003 ORTHO05D000167 2.5e-13 79.3 131 31.3
QL02p041162 Quercus lobata HOM05D000003 ORTHO05D000004 2.5e-13 79.3 106 32.1
QL05p064920 Quercus lobata HOM05D000003 ORTHO05D000004 2.5e-13 79.3 125 31.2
QL03p006515 Quercus lobata HOM05D000003 ORTHO05D000004 3.3e-13 79.0 105 36.2
TWI31G1374 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 3.3e-13 79.0 142 34.5
TWI75G0193 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 3.3e-13 79.0 139 34.5
TWI32G0681 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 4.3e-13 78.6 142 33.8
TWI53G0004 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 4.3e-13 78.6 142 33.8
CiPaw.13G135400 Carya illinoinensis HOM05D000003 ORTHO05D000004 7.3e-13 77.8 133 31.6
QL02p022361 Quercus lobata HOM05D000003 ORTHO05D000004 9.6e-13 77.4 106 33.0
QL03p039168 Quercus lobata HOM05D000003 ORTHO05D000167 1.3e-12 77.0 138 30.4
QL05p052024 Quercus lobata HOM05D000003 ORTHO05D000004 2.1e-12 76.3 106 33.0
CiPaw.10G104100 Carya illinoinensis HOM05D000003 ORTHO05D000167 4.8e-12 75.1 100 37.0
TWI63G0799 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 4.8e-12 75.1 137 32.1
CiPaw.11G085900 Carya illinoinensis HOM05D005771 ORTHO05D007173 1.1e-11 73.9 110 37.3
QL04p088136 Quercus lobata HOM05D000003 ORTHO05D000004 1.1e-11 73.9 92 35.9
CiPaw.14G084100 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.4e-11 73.6 104 34.6
QL06p031073 Quercus lobata HOM05D000003 ORTHO05D000004 1.4e-11 73.6 105 33.3
QL12p030327 Quercus lobata HOM05D000003 ORTHO05D000004 1.4e-11 73.6 106 33.0
QL09p015564 Quercus lobata HOM05D000003 ORTHO05D000004 1.8e-11 73.2 87 35.6
TWI53G0186 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.8e-11 73.2 137 27.0
CiPaw.08G150600 Carya illinoinensis HOM05D000003 ORTHO05D000004 2.4e-11 72.8 137 28.5
QL93p0138_0008 Quercus lobata HOM05D000003 ORTHO05D000167 2.4e-11 72.8 137 31.4
QL05p026767 Quercus lobata HOM05D000003 ORTHO05D000167 4.0e-11 72.0 130 32.3
QL03p053290 Quercus lobata HOM05D000003 ORTHO05D000004 5.3e-11 71.6 106 32.1
QL03p025076 Quercus lobata HOM05D000003 ORTHO05D000004 9.0e-11 70.9 94 35.1
QL03p020372 Quercus lobata HOM05D000003 ORTHO05D000004 1.2e-10 70.5 106 33.0
QL04p039404 Quercus lobata HOM05D000003 ORTHO05D000004 1.2e-10 70.5 113 32.7
QL11p012750 Quercus lobata HOM05D000003 ORTHO05D000004 1.2e-10 70.5 110 30.9
QL02p087577 Quercus lobata HOM05D000003 ORTHO05D000004 1.5e-10 70.1 100 36.0
QL02p000576 Quercus lobata HOM05D002132 ORTHO05D002168 3.4e-10 68.9 121 27.3
QL05p062712 Quercus lobata HOM05D000003 ORTHO05D000004 3.4e-10 68.9 106 33.0
QL04p067637 Quercus lobata HOM05D000003 ORTHO05D000004 7.6e-10 67.8 109 31.2
Haze_12945 Corylus avellana HOM05D000003 ORTHO05D000167 9.9e-10 67.4 128 29.7
QL09p031838 Quercus lobata HOM05D000003 ORTHO05D000004 1.3e-09 67.0 106 31.1
QL05p053348 Quercus lobata HOM05D000003 ORTHO05D000167 2.2e-09 66.2 93 36.6
CiPaw.13G119800 Carya illinoinensis HOM05D000003 ORTHO05D013566 3.8e-09 65.5 73 43.8
QL05p026414 Quercus lobata HOM05D000103 ORTHO05D000049 4.9e-09 65.1 116 31.0
QL08p017448 Quercus lobata HOM05D000003 ORTHO05D000004 6.4e-09 64.7 104 32.7
TAR250G0003 Trochodendron aralioides HOM05D000003 ORTHO05D000004 6.4e-09 64.7 100 29.0
CiPaw.13G119100 Carya illinoinensis HOM05D000003 ORTHO05D000004 8.4e-09 64.3 133 30.8
QL05p012339 Quercus lobata HOM05D000003 ORTHO05D000167 8.4e-09 64.3 130 30.0
QL05p032179 Quercus lobata HOM05D020009 ORTHO05D000004 1.1e-08 63.9 89 36.0
Haze_04006 Corylus avellana HOM05D000003 ORTHO05D000004 2.4e-08 62.8 77 40.3
CiPaw.16G012000 Carya illinoinensis HOM05D000003 ORTHO05D000006 3.2e-08 62.4 131 26.0
Haze_08252 Corylus avellana HOM05D009546 ORTHO05D014580 3.2e-08 62.4 130 26.2
Haze_12231 Corylus avellana HOM05D003181 ORTHO05D003689 5.4e-08 61.6 84 34.5
QL06p011007 Quercus lobata HOM05D000003 ORTHO05D000004 5.4e-08 61.6 99 29.3
BraA02t07551Z Brassica rapa HOM05D000003 ORTHO05D000004 7.1e-08 61.2 138 28.3
QL05p043982 Quercus lobata HOM05D000003 ORTHO05D000004 7.1e-08 61.2 141 27.7
CiPaw.15G035300 Carya illinoinensis HOM05D000003 ORTHO05D000004 9.3e-08 60.8 129 31.0
TWI32G0745 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 9.3e-08 60.8 138 29.7
Atru.chr2.49 Acer truncatum HOM05D000003 ORTHO05D000167 1.2e-07 60.5 134 27.6
AUR62034035 Chenopodium quinoa HOM05D000003 ORTHO05D000006 1.2e-07 60.5 131 29.0
QL02p020718 Quercus lobata HOM05D000003 ORTHO05D000004 1.2e-07 60.5 94 27.7
Rhsim01G0165600 Rhododendron simsii HOM05D000003 ORTHO05D007254 1.2e-07 60.5 143 31.5
Atru.chr8.1381 Acer truncatum HOM05D000003 ORTHO05D000004 1.6e-07 60.1 134 28.4
CiPaw.14G099600 Carya illinoinensis HOM05D000003 ORTHO05D000004 2.1e-07 59.7 126 26.2
QL10p061684 Quercus lobata HOM05D000003 ORTHO05D000004 2.1e-07 59.7 111 28.8
CiPaw.03G206600 Carya illinoinensis HOM05D000003 ORTHO05D000004 2.7e-07 59.3 142 27.5
QL10p062870 Quercus lobata HOM05D000003 ORTHO05D000004 2.7e-07 59.3 111 29.7
Rhsim09G0012500 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.7e-07 59.3 137 29.9
Haze_23734 Corylus avellana HOM05D009546 ORTHO05D000167 4.6e-07 58.5 93 33.3
QL04p088840 Quercus lobata HOM05D000003 ORTHO05D000004 4.6e-07 58.5 72 34.7
QL06p046108 Quercus lobata HOM05D028670 ORTHO05D000167 4.6e-07 58.5 132 28.0
QL09p033712 Quercus lobata HOM05D000003 ORTHO05D000004 4.6e-07 58.5 99 27.3
Ah.07g205700 Amaranthus hybridus HOM05D000003 ORTHO05D000004 7.9e-07 57.8 130 30.8
Ah.12g061370 Amaranthus hybridus HOM05D000003 ORTHO05D000167 7.9e-07 57.8 118 27.1
CANSAT21G1403 Cannabis sativa HOM05D000003 ORTHO05D000004 7.9e-07 57.8 104 25.0
Atru.chr1.1940 Acer truncatum HOM05D000003 ORTHO05D000004 1.0e-06 57.4 109 28.4
CANSAT78G1435 Cannabis sativa HOM05D000003 ORTHO05D000004 1.3e-06 57.0 147 26.5
PSO017G4275 Papaver somniferum HOM05D008740 ORTHO05D006738 1.3e-06 57.0 136 30.9
PGR031G0166 Punica granatum HOM05D000155 ORTHO05D000022 1.3e-06 57.0 142 28.2
QL05p017790 Quercus lobata HOM05D000003 ORTHO05D000167 1.3e-06 57.0 141 28.4
CiPaw.01G090400 Carya illinoinensis HOM05D000003 ORTHO05D000167 2.3e-06 56.2 115 28.7
QL05p065576 Quercus lobata HOM05D000003 ORTHO05D000004 2.3e-06 56.2 76 36.8
QL09p000062 Quercus lobata HOM05D000003 ORTHO05D000004 2.3e-06 56.2 49 46.9
QL02p033692 Quercus lobata HOM05D000003 ORTHO05D000004 3.0e-06 55.8 95 30.5
EL10Ac3g07037 Beta vulgaris HOM05D000003 ORTHO05D000006 3.9e-06 55.5 86 32.6
PSO761G0007 Papaver somniferum HOM05D000003 ORTHO05D001026 3.9e-06 55.5 138 29.0
QL05p014002 Quercus lobata HOM05D000003 ORTHO05D000004 3.9e-06 55.5 58 44.8
QL09p011339 Quercus lobata HOM05D000003 ORTHO05D000006 3.9e-06 55.5 76 35.5
QL12p029380 Quercus lobata HOM05D000003 ORTHO05D000004 3.9e-06 55.5 94 31.9
TAR199G0001 Trochodendron aralioides HOM05D000003 ORTHO05D000004 3.9e-06 55.5 137 24.8
CANSAT25G2443 Cannabis sativa HOM05D000003 ORTHO05D000004 5.1e-06 55.1 141 23.4
AUR62041464 Chenopodium quinoa HOM05D000073 ORTHO05D000033 5.1e-06 55.1 140 29.3
Haze_10890 Corylus avellana HOM05D007313 ORTHO05D005299 5.1e-06 55.1 59 42.4
PSO017G3608 Papaver somniferum HOM05D008740 ORTHO05D006738 5.1e-06 55.1 135 30.4
QL04p085495 Quercus lobata HOM05D020009 ORTHO05D000004 5.1e-06 55.1 91 31.9
Atru.chr4.1218 Acer truncatum HOM05D000003 ORTHO05D000167 6.6e-06 54.7 135 28.9
RcHm_v2.0_Chr7g0182091 Rosa chinensis HOM05D000003 ORTHO05D000004 6.6e-06 54.7 137 26.3
CARHR166210 Cardamine hirsuta HOM05D000003 ORTHO05D001498 8.7e-06 54.3 144 26.4
Cfa019766 Carpinus fangiana HOM05D058350 ORTHO05D000167 8.7e-06 54.3 79 31.6


User provided reference genes

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