Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.16G027100 Carya illinoinensis HOM05D005314 ORTHO05D006522 1.3e-188 662.9 345 100.0
CiPaw.15G037000 Carya illinoinensis HOM05D005314 ORTHO05D006522 2.8e-170 602.1 345 88.7
Haze_18156 Corylus avellana HOM05D005314 ORTHO05D006522 1.5e-168 596.3 345 89.6
Cfa017974 Carpinus fangiana HOM05D005314 ORTHO05D006522 5.8e-168 594.3 345 89.0
QL02p000736 Quercus lobata HOM05D005314 ORTHO05D006522 1.1e-161 573.5 344 85.8
Thecc.09G057100 Theobroma cacao HOM05D005314 ORTHO05D006522 3.4e-160 568.5 345 83.5
Prupe.1G409300 Prunus persica HOM05D005314 ORTHO05D006522 1.0e-156 557.0 345 82.6
Gorai.013G220600 Gossypium raimondii HOM05D005314 ORTHO05D006522 1.3e-156 556.6 345 80.9
Gohir.D13G194600 Gossypium hirsutum HOM05D005314 ORTHO05D006522 1.7e-156 556.2 345 80.9
Eucgr.C03058 Eucalyptus grandis HOM05D005314 ORTHO05D006522 8.7e-156 553.9 345 81.4
COL.COLO4_21084 Corchorus olitorius HOM05D005314 ORTHO05D006522 2.5e-155 552.4 345 81.7
Gorai.001G022500 Gossypium raimondii HOM05D005314 ORTHO05D006522 2.5e-155 552.4 345 80.9
TAR369G0158 Trochodendron aralioides HOM05D005314 ORTHO05D006522 2.5e-155 552.4 345 81.7
TAR636G1106 Trochodendron aralioides HOM05D005314 ORTHO05D006522 2.5e-155 552.4 345 81.7
Gohir.A13G187700 Gossypium hirsutum HOM05D005314 ORTHO05D006522 5.6e-155 551.2 345 80.3
Gohir.A07G021950 Gossypium hirsutum HOM05D005314 ORTHO05D006522 7.3e-155 550.8 345 80.6
Manes.03G050000 Manihot esculenta HOM05D005314 ORTHO05D006522 9.6e-155 550.4 345 81.7
TWI34G0632 Tripterygium wilfordii HOM05D005314 ORTHO05D006522 1.8e-153 546.2 345 81.4
MD15G1056700 Malus domestica HOM05D005314 ORTHO05D006522 3.1e-153 545.4 345 81.2
CANSAT25G2280 Cannabis sativa HOM05D005314 ORTHO05D006522 4.0e-153 545.0 347 82.7
TWI32G0330 Tripterygium wilfordii HOM05D005314 ORTHO05D006522 5.3e-153 544.7 345 81.7
Potri.018G060500 Populus trichocarpa HOM05D005314 ORTHO05D006522 9.9e-152 540.4 345 80.0
MD08G1064900 Malus domestica HOM05D005314 ORTHO05D006522 4.9e-151 538.1 345 79.7
MSTRG.25961 Avicennia marina HOM05D005314 ORTHO05D006522 6.4e-151 537.7 345 78.8
Ca_13152_v3 Cicer arietinum L. HOM05D005314 ORTHO05D006522 1.1e-150 537.0 345 80.6
Actinidia30326 Actinidia chinensis HOM05D005314 ORTHO05D006522 1.9e-150 536.2 346 80.1
PGR044G2019 Punica granatum HOM05D005314 ORTHO05D006522 2.4e-150 535.8 346 79.5
CSS0005464 Camellia sinensis var. sinensis HOM05D005314 ORTHO05D006522 3.2e-150 535.4 346 79.2
Dinv22878 Davidia involucrata HOM05D005314 ORTHO05D006522 5.4e-150 534.6 345 80.3
Migut.A00114 Erythranthe guttata HOM05D005314 ORTHO05D006522 1.6e-149 533.1 345 78.0
FvH4_2g31600 Fragaria vesca HOM05D005314 ORTHO05D006522 2.1e-149 532.7 345 79.4
CsaV3_4G035770 Cucumis sativus L. HOM05D005314 ORTHO05D006522 2.7e-149 532.3 345 78.3
Potri.006G226000 Populus trichocarpa HOM05D005314 ORTHO05D006522 3.5e-149 531.9 345 79.1
RcHm_v2.0_Chr6g0311221 Rosa chinensis HOM05D005314 ORTHO05D006522 6.0e-149 531.2 345 79.1
GSVIVG01035376001 Vitis vinifera HOM05D005314 ORTHO05D006522 1.3e-148 530.0 348 79.0
Nn8g38796 Nelumbo nucifera HOM05D005314 ORTHO05D006522 5.1e-148 528.1 350 77.4
Lj1g0000731 Lotus japonicus HOM05D005314 ORTHO05D006522 6.7e-148 527.7 345 78.0
SalBow4G3021 Salvia bowleyana HOM05D005314 ORTHO05D006522 6.7e-148 527.7 345 76.8
Glyma.06G053100 Glycine max HOM05D005314 ORTHO05D006522 1.5e-147 526.6 345 78.3
BolC9t59318H Brassica oleracea HOM05D005314 ORTHO05D006522 2.5e-147 525.8 343 77.6
THA.LOC104811236 Tarenaya hassleriana HOM05D005314 ORTHO05D006522 4.3e-147 525.0 343 77.6
TPR.G13039 Trifolium pratense HOM05D005314 ORTHO05D006522 7.4e-147 524.2 347 79.3
BcaNung02637 Brassica carinata HOM05D005314 ORTHO05D006522 2.1e-146 522.7 343 77.0
C09p64870 Brassica napus HOM05D005314 ORTHO05D006522 2.1e-146 522.7 343 77.3
ClCG05G017990 Citrullus lanatus HOM05D005314 ORTHO05D006522 2.1e-146 522.7 344 77.6
Sp6g31630 Schrenkiella parvula HOM05D005314 ORTHO05D006522 3.6e-146 521.9 343 77.0
A10p25800 Brassica napus HOM05D005314 ORTHO05D006522 6.2e-146 521.2 343 76.7
Cc08_g10890 Coffea canephora HOM05D005314 ORTHO05D006522 6.2e-146 521.2 345 77.7
Psat6g021480 Pisum sativum HOM05D005314 ORTHO05D006522 1.8e-145 519.6 345 79.4
Sed0001440 Sechium edule HOM05D005314 ORTHO05D006522 1.8e-145 519.6 341 77.1
A02p01290 Brassica napus HOM05D005314 ORTHO05D006522 2.4e-145 519.2 343 76.7
BraA02t05108Z Brassica rapa HOM05D005314 ORTHO05D006522 2.4e-145 519.2 343 76.7
Solyc06g036780.3 Solanum lycopersicum HOM05D005314 ORTHO05D006522 5.3e-145 518.1 345 76.8
Sopen06g012940 Solanum pennellii HOM05D005314 ORTHO05D006522 5.3e-145 518.1 345 76.8
BcaC03g13403 Brassica carinata HOM05D005314 ORTHO05D006522 6.9e-145 517.7 343 76.4
C02p05500 Brassica napus HOM05D005314 ORTHO05D006522 6.9e-145 517.7 343 76.4
BolC2t06496H Brassica oleracea HOM05D005314 ORTHO05D006522 6.9e-145 517.7 343 76.4
Medtr1g015820 Medicago truncatula HOM05D005314 ORTHO05D006522 1.2e-144 516.9 347 78.1
Thhalv10014010m.g Eutrema salsugineum HOM05D005314 ORTHO05D006522 1.5e-144 516.5 343 76.1
Phvul.009G078900 Phaseolus vulgaris HOM05D005314 ORTHO05D006522 2.0e-144 516.2 336 76.5
Hma1.2p1_0544F.1_g175630 Hydrangea macrophylla HOM05D005314 ORTHO05D006522 3.4e-144 515.4 344 77.3
Ciclev10008891m.g Citrus clementina HOM05D005314 ORTHO05D006522 5.8e-144 514.6 337 79.5
PSO210G6435 Papaver somniferum HOM05D005314 ORTHO05D006522 7.6e-144 514.2 346 76.6
CAN.G130.11 Capsicum annuum HOM05D005314 ORTHO05D006522 1.3e-143 513.5 345 76.2
SGA_v2.0_scaffold20G09204 Striga asiatica HOM05D005314 ORTHO05D006522 1.7e-143 513.1 392 69.4
Glyma.14G097400 Glycine max HOM05D005314 ORTHO05D006522 2.2e-143 512.7 351 76.6
AL6G22740 Arabidopsis lyrata HOM05D005314 ORTHO05D006522 2.9e-143 512.3 343 75.8
AT5G11960 Arabidopsis thaliana HOM05D005314 ORTHO05D006522 2.9e-143 512.3 343 75.5
BraA10t44644Z Brassica rapa HOM05D005314 ORTHO05D006522 2.9e-143 512.3 355 74.1
AUR62009122 Chenopodium quinoa HOM05D005314 ORTHO05D006522 4.9e-143 511.5 343 75.2
PSO210G6321 Papaver somniferum HOM05D005314 ORTHO05D006522 4.9e-143 511.5 346 76.3
Lalb_Chr11g0063171 Lupinus albus HOM05D005314 ORTHO05D006522 8.4e-143 510.8 345 75.9
FAN27G1630 Fragaria x ananassa HOM05D005314 ORTHO05D006522 1.4e-142 510.0 345 77.4
Phvul.001G037500 Phaseolus vulgaris HOM05D005314 ORTHO05D006522 2.4e-142 509.2 345 76.2
Carub.0006s1050 Capsella rubella HOM05D005314 ORTHO05D006522 4.2e-142 508.4 343 74.9
MELO3C016882.2 Cucumis melo HOM05D005314 ORTHO05D006522 4.6e-141 505.0 345 75.7
Aqoxy7G04033 Aquilegia oxysepala HOM05D000411 ORTHO05D006522 2.3e-140 502.7 337 76.0
Rhsim11G0042200 Rhododendron simsii HOM05D005314 ORTHO05D006522 2.3e-140 502.7 367 72.5
VMungo0647G2045 Vigna mungo HOM05D005314 ORTHO05D006522 5.1e-140 501.5 358 73.7
Aa31LG3G15270 Aethionema arabicum HOM05D005314 ORTHO05D006522 1.9e-139 499.6 355 72.4
ECA233G4949 Erigeron canadensis HOM05D005314 ORTHO05D006522 9.6e-139 497.3 349 74.8
Peaxi162Scf01088g00005 Petunia axillaris HOM05D005314 ORTHO05D006522 9.6e-139 497.3 325 77.5
Lsat_1_v5_gn_6_14601 Lactuca sativa HOM05D005314 ORTHO05D006522 3.7e-138 495.4 345 74.5
Hund19438 Selenicereus undatus HOM05D005314 ORTHO05D006522 5.3e-137 491.5 343 75.2
ATR0789G137 Amborella trichopoda HOM05D005314 ORTHO05D006522 7.6e-136 487.6 345 72.5
VMungo1309G2963 Vigna mungo HOM05D005314 ORTHO05D006522 2.2e-135 486.1 336 74.1
Sabra18G0054400 Salix brachista HOM05D005314 ORTHO05D006522 4.9e-135 485.0 415 64.8
HanXRQChr08g0226511 Helianthus annuus HOM05D005314 ORTHO05D006522 2.5e-134 482.6 342 74.3
Lalb_Chr22g0356141 Lupinus albus HOM05D005314 ORTHO05D006522 7.1e-134 481.1 291 82.5
CDE06G1634 Ceratophyllum demersum HOM05D005314 ORTHO05D006522 1.6e-133 479.9 345 73.9
Atru.chr7.1939 Acer truncatum HOM05D005314 ORTHO05D006522 1.1e-131 473.8 272 87.9
Glyma.04G052700 Glycine max HOM05D005314 ORTHO05D006522 1.5e-131 473.4 308 78.6
FAN24G2134 Fragaria x ananassa HOM05D005314 ORTHO05D006522 2.1e-130 469.5 308 78.6
FAN15G2750 Fragaria x ananassa HOM05D005314 ORTHO05D006522 3.7e-130 468.8 308 78.6
MBI01_g21122_MAGBIO Magnolia biondii HOM05D005314 ORTHO05D006522 3.7e-130 468.8 336 73.2
HPP92_007653 Vanilla planifolia HOM05D005314 ORTHO05D006522 4.8e-130 468.4 338 70.4
Lalb_Chr14g0366381 Lupinus albus HOM05D005314 ORTHO05D006522 5.9e-128 461.5 272 84.6
Glyma.17G227100 Glycine max HOM05D005314 ORTHO05D006522 2.5e-123 446.0 345 70.1
arahy.Tifrunner.gnm1.ann1.VQ1HGR Arachis hypogaea HOM05D005314 ORTHO05D006522 3.3e-123 445.7 345 70.4
arahy.Tifrunner.gnm1.ann1.UTD444 Arachis hypogaea HOM05D005314 ORTHO05D006522 1.6e-122 443.4 345 69.3
arahy.Tifrunner.gnm1.ann1.GAY7D4 Arachis hypogaea HOM05D005314 ORTHO05D006522 2.4e-121 439.5 345 68.4
DCAR_007733 Daucus carota HOM05D005314 ORTHO05D006522 9.1e-121 437.6 401 61.8
Lj8A530G14 Lonicera japonica HOM05D005314 ORTHO05D006522 2.0e-120 436.4 295 78.3
Sc23g0005690 Simmondsia chinensis HOM05D005314 ORTHO05D006522 2.7e-117 426.0 343 66.5
Sabra06G0174700 Salix brachista HOM05D005314 ORTHO05D006522 4.8e-114 415.2 417 57.3
Oeu003996.1 Olea europaea HOM05D005314 ORTHO05D006522 3.1e-113 412.5 329 67.8
vmacro00123 Vaccinium macrocarpon HOM05D005314 ORTHO05D006522 6.9e-113 411.4 292 73.6
Duzib150G1607 Durio zibethinus HOM05D005314 ORTHO05D006522 1.7e-103 380.2 222 83.8
EL10Ac2g03829 Beta vulgaris HOM05D005314 ORTHO05D006522 5.5e-102 375.2 343 60.1
Dinv28005 Davidia involucrata HOM05D005314 ORTHO05D006522 8.8e-100 367.9 222 82.0
unitig_88.g27677 Utricularia gibba HOM05D005314 ORTHO05D006522 9.7e-99 364.4 384 53.9
arahy.Tifrunner.gnm1.ann1.6D5JL1 Arachis hypogaea HOM05D005314 ORTHO05D006522 4.8e-98 362.1 345 60.9
Sed0024799 Sechium edule HOM05D005314 ORTHO05D006522 1.0e-95 354.4 246 73.6
Gohir.D07G021900 Gossypium hirsutum HOM05D005314 ORTHO05D006522 1.8e-92 343.6 204 83.8
Nitab4.5_0000972g0030 Nicotiana tabacum HOM05D005314 ORTHO05D006522 3.8e-87 325.9 399 53.1
Nitab4.5_0000268g0140 Nicotiana tabacum HOM05D005314 ORTHO05D006522 1.2e-80 304.3 344 52.0
Mapoly0049s0128 Marchantia polymorpha HOM05D005314 ORTHO05D006522 2.8e-77 293.1 335 47.5
MD11G1243300 Malus domestica HOM05D005314 ORTHO05D006522 3.0e-76 289.7 169 84.6
Zm00001eb155260 Zea mays HOM05D005314 ORTHO05D006522 3.4e-75 286.2 249 61.4
Ah.10g034130 Amaranthus hybridus HOM05D005314 ORTHO05D006522 4.9e-74 282.3 249 61.0
CARHR201170 Cardamine hirsuta HOM05D005314 ORTHO05D006522 7.0e-73 278.5 200 71.0
Hund03325 Selenicereus undatus HOM05D005314 ORTHO05D006522 2.4e-65 253.4 255 55.7
Pp3c7_50 Physcomitrium patens HOM05D005314 ORTHO05D006522 4.6e-64 249.2 273 46.2
Cpa.g.sc7.160 Carica papaya HOM05D005314 ORTHO05D006522 4.6e-56 222.6 144 80.6
Cpa.g.sc7.159 Carica papaya HOM05D005314 ORTHO05D006522 7.3e-54 215.3 165 72.1
Os01g0708300 Oryza sativa ssp. japonica HOM05D005314 ORTHO05D006522 2.1e-53 213.8 144 70.1
Lj7A260G18 Lonicera japonica HOM05D005314 ORTHO05D006522 4.7e-53 212.6 251 51.8
RcHm_v2.0_Chr1g0383701 Rosa chinensis HOM05D005314 ORTHO05D006522 4.1e-49 199.5 194 55.7
CBR_g50008 Chara braunii HOM05D005314 ORTHO05D006522 1.6e-48 197.6 329 38.3
AUR62039137 Chenopodium quinoa HOM05D005314 ORTHO05D006522 6.9e-44 182.2 131 71.8
arahy.Tifrunner.gnm1.ann1.IMU44M Arachis hypogaea HOM05D005314 ORTHO05D006522 2.0e-43 180.6 184 58.2
CSS0003098 Camellia sinensis var. sinensis HOM05D005314 ORTHO05D006522 4.4e-43 179.5 110 83.6
PRCOL_00001271 Prasinoderma coloniale HOM05D005314 ORTHO05D006522 3.8e-42 176.4 323 33.4
MCO12G408 Micromonas commoda HOM05D005314 ORTHO05D006522 7.1e-41 172.2 316 35.8
Cre10.g419700 Chlamydomonas reinhardtii HOM05D005314 ORTHO05D006522 6.6e-39 165.6 329 34.0
PGSC0003DMG400031356 Solanum tuberosum HOM05D005314 ORTHO05D006522 6.9e-36 155.6 132 65.9
BcaB03g16563 Brassica carinata HOM05D005314 ORTHO05D006522 1.5e-30 137.9 113 65.5
Gohir.D07G021800 Gossypium hirsutum HOM05D005314 ORTHO05D006522 1.6e-29 134.4 95 72.6
Oeu040341.1 Olea europaea HOM05D005314 ORTHO05D006522 6.9e-28 129.0 74 85.1
arahy.Tifrunner.gnm1.ann1.TY68CU Arachis hypogaea HOM05D005314 ORTHO05D005864 1.5e-22 111.3 106 61.3
CSS0034519 Camellia sinensis var. sinensis HOM05D005314 ORTHO05D006522 6.2e-21 105.9 95 65.3
SEGI_34785 Sequoiadendron giganteum HOM05D005314 ORTHO05D006522 4.0e-20 103.2 73 67.1


User provided reference genes

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