Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.16G022500 Carya illinoinensis HOM05D007279 ORTHO05D009212 4.7e-104 381.3 209 100.0
Cfa018422 Carpinus fangiana HOM05D007279 ORTHO05D009212 1.2e-88 330.1 212 82.5
Duzib093G1369 Durio zibethinus HOM05D007279 ORTHO05D009212 4.7e-88 328.2 211 77.7
GSVIVG01008801001 Vitis vinifera HOM05D007279 ORTHO05D009212 4.4e-86 321.6 211 82.9
COL.COLO4_33390 Corchorus olitorius HOM05D007279 ORTHO05D009212 1.7e-85 319.7 212 77.4
Manes.02G169000 Manihot esculenta HOM05D007279 ORTHO05D009212 4.8e-85 318.2 207 77.3
Gohir.D03G063100 Gossypium hirsutum HOM05D007279 ORTHO05D009212 5.4e-84 314.7 207 78.7
Gorai.013G108300 Gossypium raimondii HOM05D007279 ORTHO05D009212 5.4e-84 314.7 207 78.7
Gohir.A02G110900 Gossypium hirsutum HOM05D007279 ORTHO05D009212 2.0e-83 312.8 202 78.2
Potri.005G183000 Populus trichocarpa HOM05D007279 ORTHO05D009212 2.3e-82 309.3 206 75.7
Sabra05G0138700 Salix brachista HOM05D007279 ORTHO05D009212 7.2e-81 304.3 210 77.6
QL09p032239 Quercus lobata HOM05D007279 ORTHO05D009212 3.6e-80 302.0 214 77.1
TWI34G0215 Tripterygium wilfordii HOM05D007279 ORTHO05D009212 4.7e-80 301.6 207 74.4
Dinv27265 Davidia involucrata HOM05D007279 ORTHO05D009212 6.8e-79 297.7 211 72.0
Atru.chr13.1590 Acer truncatum HOM05D007279 ORTHO05D009212 4.4e-78 295.0 211 71.6
Prupe.1G488900 Prunus persica HOM05D007279 ORTHO05D009212 7.5e-78 294.3 213 70.9
FvH4_2g27960 Fragaria vesca HOM05D007279 ORTHO05D009212 3.7e-77 292.0 210 68.6
Glyma.06G118000 Glycine max HOM05D007279 ORTHO05D009212 3.7e-77 292.0 215 74.9
CSS0035764 Camellia sinensis var. sinensis HOM05D007279 ORTHO05D009212 6.3e-77 291.2 215 69.3
FAN27G1298 Fragaria x ananassa HOM05D007279 ORTHO05D009212 1.4e-76 290.0 210 68.1
TAR628G0029 Trochodendron aralioides HOM05D007279 ORTHO05D009212 1.4e-76 290.0 209 75.6
FAN24G0438 Fragaria x ananassa HOM05D007279 ORTHO05D009212 1.8e-76 289.7 210 68.1
Glyma.04G245200 Glycine max HOM05D007279 ORTHO05D009212 1.8e-76 289.7 214 75.2
FAN20G2640 Fragaria x ananassa HOM05D007279 ORTHO05D009212 9.2e-76 287.3 208 67.8
Nitab4.5_0000317g0110 Nicotiana tabacum HOM05D007279 ORTHO05D009212 1.6e-75 286.6 202 75.2
PGR044G1698 Punica granatum HOM05D007279 ORTHO05D009212 1.6e-75 286.6 217 76.0
RcHm_v2.0_Chr6g0296781 Rosa chinensis HOM05D007279 ORTHO05D009212 1.6e-75 286.6 209 67.9
Phvul.009G130400 Phaseolus vulgaris HOM05D007279 ORTHO05D009212 4.5e-75 285.0 210 74.8
Ca_16613_v3 Cicer arietinum L. HOM05D007279 ORTHO05D009212 1.7e-74 283.1 212 67.0
Nitab4.5_0003485g0020 Nicotiana tabacum HOM05D007279 ORTHO05D009212 2.3e-74 282.7 209 72.2
MSTRG.1407 Avicennia marina HOM05D007279 ORTHO05D009212 2.9e-74 282.3 210 70.0
VMungo1309G2060 Vigna mungo HOM05D007279 ORTHO05D009212 2.9e-74 282.3 208 74.0
Ciclev10002484m.g Citrus clementina HOM05D007279 ORTHO05D009212 3.9e-74 282.0 207 76.3
Lj1g0002247 Lotus japonicus HOM05D007279 ORTHO05D009212 3.9e-74 282.0 213 66.7
Hma1.2p1_0880F.1_g231840 Hydrangea macrophylla HOM05D007279 ORTHO05D009212 1.1e-73 280.4 213 69.0
Medtr3g088645 Medicago truncatula HOM05D007279 ORTHO05D009212 1.1e-73 280.4 212 66.5
MD15G1133300 Malus domestica HOM05D007279 ORTHO05D009212 1.5e-73 280.0 206 68.0
CAN.G405.7 Capsicum annuum HOM05D007279 ORTHO05D009212 2.5e-73 279.3 202 73.3
Cc10_g13680 Coffea canephora HOM05D007279 ORTHO05D009212 2.5e-73 279.3 206 75.2
PGSC0003DMG400025319 Solanum tuberosum HOM05D007279 ORTHO05D009212 4.3e-73 278.5 202 74.8
Lj4A679T22 Lonicera japonica HOM05D007279 ORTHO05D009212 1.2e-72 276.9 202 66.8
Solyc04g057980.3 Solanum lycopersicum HOM05D007279 ORTHO05D009212 2.1e-72 276.2 203 73.4
arahy.Tifrunner.gnm1.ann1.03R76N Arachis hypogaea HOM05D007279 ORTHO05D009212 2.8e-72 275.8 217 66.8
arahy.Tifrunner.gnm1.ann1.G5JU44 Arachis hypogaea HOM05D007279 ORTHO05D009212 2.8e-72 275.8 217 66.8
Lj4A677T28 Lonicera japonica HOM05D007279 ORTHO05D009212 2.8e-72 275.8 202 66.8
Psat5g084400 Pisum sativum HOM05D007279 ORTHO05D009212 4.7e-72 275.0 213 65.7
Sopen04g025840 Solanum pennellii HOM05D007279 ORTHO05D009212 8.0e-72 274.2 203 74.9
Peaxi162Scf00066g00422 Petunia axillaris HOM05D007279 ORTHO05D009212 1.0e-71 273.9 209 72.2
CANSAT25G0430 Cannabis sativa HOM05D007279 ORTHO05D009212 2.3e-71 272.7 212 67.5
Lalb_Chr08g0241031 Lupinus albus HOM05D007279 ORTHO05D009212 2.3e-71 272.7 213 66.7
Sabra02G0061000 Salix brachista HOM05D007279 ORTHO05D009212 6.8e-71 271.2 188 81.4
DCAR_016660 Daucus carota HOM05D007279 ORTHO05D009212 1.2e-70 270.4 204 67.6
Eucgr.F03852 Eucalyptus grandis HOM05D007279 ORTHO05D009212 3.4e-70 268.9 220 70.5
Nn5g28445 Nelumbo nucifera HOM05D007279 ORTHO05D009212 9.8e-70 267.3 212 70.8
ClCG09G021820 Citrullus lanatus HOM05D007279 ORTHO05D009212 1.3e-69 266.9 207 71.5
Sed0026443 Sechium edule HOM05D007279 ORTHO05D009212 1.7e-69 266.5 206 68.0
Migut.C01071 Erythranthe guttata HOM05D007279 ORTHO05D009212 6.4e-69 264.6 213 62.9
AUR62007704 Chenopodium quinoa HOM05D007279 ORTHO05D009212 8.3e-69 264.2 204 64.2
Lsat_1_v5_gn_1_7161 Lactuca sativa HOM05D007279 ORTHO05D009212 8.3e-69 264.2 208 65.4
CsaV3_7G022180 Cucumis sativus L. HOM05D007279 ORTHO05D009212 1.1e-68 263.8 206 66.5
EL10Ac1g01365 Beta vulgaris HOM05D007279 ORTHO05D009212 2.4e-68 262.7 202 65.3
MELO3C012712.2 Cucumis melo HOM05D007279 ORTHO05D009212 3.2e-68 262.3 206 67.5
AUR62013436 Chenopodium quinoa HOM05D007279 ORTHO05D009212 1.6e-67 260.0 204 64.7
Aqoxy6G00304 Aquilegia oxysepala HOM05D007279 ORTHO05D009212 2.0e-67 259.6 202 65.8
Actinidia15209 Actinidia chinensis HOM05D000237 ORTHO05D006530 1.0e-66 257.3 185 69.7
THA.LOC104808254 Tarenaya hassleriana HOM05D007279 ORTHO05D009212 1.7e-66 256.5 204 65.2
ECA247G0566 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.1e-65 253.8 144 81.2
HanXRQChr02g0045151 Helianthus annuus HOM05D007279 ORTHO05D009212 1.1e-65 253.8 208 63.5
Rhsim02G0114000 Rhododendron simsii HOM05D007279 ORTHO05D009212 1.9e-65 253.1 202 63.9
A08p22940 Brassica napus HOM05D007279 ORTHO05D009212 3.3e-65 252.3 218 60.6
Ah.05g169060 Amaranthus hybridus HOM05D007279 ORTHO05D009212 1.2e-64 250.4 140 80.0
BcaC01g00366 Brassica carinata HOM05D007279 ORTHO05D009212 1.2e-64 250.4 218 60.1
C03p78920 Brassica napus HOM05D007279 ORTHO05D009212 1.2e-64 250.4 218 60.1
BolC3t20136H Brassica oleracea HOM05D007279 ORTHO05D009212 1.2e-64 250.4 218 60.1
Rhsim02G0113900 Rhododendron simsii HOM05D007279 ORTHO05D009212 1.2e-64 250.4 198 70.2
MBI03_g13490_MAGBIO Magnolia biondii HOM05D007279 ORTHO05D009212 1.6e-64 250.0 189 74.6
BraA08t34256Z Brassica rapa HOM05D007279 ORTHO05D009212 2.1e-64 249.6 218 59.6
CARHR246340 Cardamine hirsuta HOM05D007279 ORTHO05D009212 4.7e-64 248.4 217 60.4
FAN15G0564 Fragaria x ananassa HOM05D000237 ORTHO05D006530 4.7e-64 248.4 210 61.0
vmacro17341 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 1.1e-63 247.3 223 60.5
BcaB03g12324 Brassica carinata HOM05D007279 ORTHO05D009212 1.4e-63 246.9 218 59.6
Sp7g35570 Schrenkiella parvula HOM05D007279 ORTHO05D009212 2.3e-63 246.1 215 60.9
PSO528G0084 Papaver somniferum HOM05D007279 ORTHO05D009212 4.0e-63 245.4 197 61.4
AT4G37925 Arabidopsis thaliana HOM05D007279 ORTHO05D009212 5.2e-63 245.0 217 59.9
AL7G12720 Arabidopsis lyrata HOM05D007279 ORTHO05D009212 6.8e-63 244.6 217 59.9
Thhalv10026209m.g Eutrema salsugineum HOM05D007279 ORTHO05D009212 6.8e-63 244.6 218 59.6
Aa31LG6G14860 Aethionema arabicum HOM05D007279 ORTHO05D009212 1.5e-62 243.4 150 76.7
unitig_46.g18082 Utricularia gibba HOM05D007279 ORTHO05D009212 1.5e-62 243.4 136 82.4
PSO170G3576 Papaver somniferum HOM05D007279 ORTHO05D009212 7.5e-62 241.1 197 60.9
Potri.002G077600 Populus trichocarpa HOM05D007279 ORTHO05D009212 1.7e-61 240.0 172 76.2
Rhsim02G0113400 Rhododendron simsii HOM05D007279 ORTHO05D009212 2.9e-61 239.2 206 63.6
Carub.0007s0229 Capsella rubella HOM05D007279 ORTHO05D009212 4.9e-61 238.4 217 58.5
ATR0681G064 Amborella trichopoda HOM05D007279 ORTHO05D009212 8.3e-61 237.7 125 87.2
Os04g0539000 Oryza sativa ssp. japonica HOM05D007279 ORTHO05D009212 7.3e-57 224.6 138 76.8
Zm00001eb075370 Zea mays HOM05D007279 ORTHO05D009212 2.0e-54 216.5 127 79.5
CDE08G0899 Ceratophyllum demersum HOM05D007279 ORTHO05D009212 5.4e-52 208.4 136 72.8
Thecc.08G133700 Theobroma cacao HOM05D007279 ORTHO05D009212 5.4e-52 208.4 148 76.4
SEGI_28724 Sequoiadendron giganteum HOM05D007279 ORTHO05D009212 6.0e-51 204.9 144 67.4
Pp3c1_14910 Physcomitrium patens HOM05D007279 ORTHO05D009212 1.3e-42 177.2 138 61.6
CBR_g26037 Chara braunii HOM05D007279 ORTHO05D009212 1.5e-41 173.7 126 62.7
SMO339G0044 Selaginella moellendorffii HOM05D007279 ORTHO05D009212 4.8e-40 168.7 124 62.9
AL3G19570 Arabidopsis lyrata HOM05D007279 ORTHO05D009212 6.2e-40 168.3 154 58.4
TPR.G6347 Trifolium pratense HOM05D007279 ORTHO05D009212 2.4e-39 166.4 91 80.2
AagrBONN_evm.TU.Sc2ySwM_344.1177 Anthoceros agrestis HOM05D007279 ORTHO05D009212 1.7e-37 160.2 136 55.9
Mapoly0063s0013 Marchantia polymorpha HOM05D007279 ORTHO05D009212 2.7e-35 152.9 112 61.6
TAR623G1519 Trochodendron aralioides HOM05D007279 ORTHO05D009212 4.6e-35 152.1 174 48.9
vmacro17338 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 1.5e-33 147.1 139 58.3
SalBow7G1271 Salvia bowleyana HOM05D007279 ORTHO05D009212 5.1e-26 122.1 206 43.2
vmacro17312 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 1.6e-24 117.1 133 49.6
Zm00001eb427570 Zea mays HOM05D007279 ORTHO05D009212 1.5e-22 110.5 71 73.2
Oeu047171.1 Olea europaea HOM05D004195 ORTHO05D005309 2.8e-16 89.7 132 42.4


User provided reference genes

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