Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.16G011000 Carya illinoinensis HOM05D006715 ORTHO05D008345 0.0e+00 1302.3 651 100.0
Cfa018312 Carpinus fangiana HOM05D006715 ORTHO05D008345 1.1e-247 860.1 622 71.9
QL09p013340 Quercus lobata HOM05D006715 ORTHO05D008345 8.3e-184 647.9 603 60.2
MD05G1027900 Malus domestica HOM05D006715 ORTHO05D008345 2.1e-179 633.3 655 56.5
RcHm_v2.0_Chr6g0275051 Rosa chinensis HOM05D006715 ORTHO05D008345 1.7e-173 613.6 637 55.3
Prupe.8G033600 Prunus persica HOM05D006715 ORTHO05D008345 7.3e-172 608.2 649 55.5
TWI34G0194 Tripterygium wilfordii HOM05D006715 ORTHO05D008345 1.6e-166 590.5 681 50.2
Manes.02G180601 Manihot esculenta HOM05D006715 ORTHO05D008345 9.0e-162 574.7 621 52.5
FAN24G1213 Fragaria x ananassa HOM05D006715 ORTHO05D008345 1.1e-159 567.8 625 53.0
FvH4_2g13430 Fragaria vesca HOM05D006715 ORTHO05D008345 1.9e-159 567.0 625 52.8
Cpa.g.sc1027.1 Carica papaya HOM05D006715 ORTHO05D008345 5.4e-159 565.5 642 49.8
CANSAT25G3857 Cannabis sativa HOM05D006715 ORTHO05D008345 1.6e-158 563.9 617 54.0
Actinidia17784 Actinidia chinensis HOM05D006715 ORTHO05D008345 1.5e-156 557.4 645 50.5
Thecc.08G154500 Theobroma cacao HOM05D006715 ORTHO05D008345 2.5e-156 556.6 594 53.0
Phvul.004G094200 Phaseolus vulgaris HOM05D006715 ORTHO05D008345 4.8e-155 552.4 623 54.6
Potri.005G193500 Populus trichocarpa HOM05D006715 ORTHO05D008345 3.1e-154 549.7 591 54.0
TAR381G1273 Trochodendron aralioides HOM05D006715 ORTHO05D008345 9.0e-154 548.1 641 49.0
Gohir.A06G112504 Gossypium hirsutum HOM05D006715 ORTHO05D008345 7.6e-153 545.0 583 52.8
Gorai.010G134600 Gossypium raimondii HOM05D006715 ORTHO05D008345 7.6e-153 545.0 583 52.8
Lj2g0009741 Lotus japonicus HOM05D006715 ORTHO05D008345 8.4e-152 541.6 619 51.1
Duzib093G1010 Durio zibethinus HOM05D006715 ORTHO05D008345 2.1e-150 537.0 588 51.0
arahy.Tifrunner.gnm1.ann1.6MC3QX Arachis hypogaea HOM05D006715 ORTHO05D008345 7.9e-150 535.0 651 49.5
Psat1g102000 Pisum sativum HOM05D006715 ORTHO05D008345 1.3e-149 534.3 593 53.6
Lj7A376T34 Lonicera japonica HOM05D006715 ORTHO05D008345 2.3e-149 533.5 613 50.4
VMungo0464G1764 Vigna mungo HOM05D006715 ORTHO05D008345 8.7e-149 531.6 623 51.7
arahy.Tifrunner.gnm1.ann1.SG7PGU Arachis hypogaea HOM05D006715 ORTHO05D008345 2.5e-148 530.0 671 48.3
Haze_17767 Corylus avellana HOM05D006715 ORTHO05D008345 4.9e-144 515.8 367 71.7
Atru.chr13.2084 Acer truncatum HOM05D006715 ORTHO05D008345 6.4e-144 515.4 617 48.9
Ciclev10000601m.g Citrus clementina HOM05D006715 ORTHO05D008345 1.6e-142 510.8 591 50.6
Medtr2g045070 Medicago truncatula HOM05D006715 ORTHO05D008345 3.9e-141 506.1 595 51.9
PGR042G1662 Punica granatum HOM05D006715 ORTHO05D008345 3.9e-141 506.1 655 48.4
CAN.G1215.10 Capsicum annuum HOM05D006715 ORTHO05D008345 5.1e-141 505.8 642 45.2
ClCG08G002210 Citrullus lanatus HOM05D006715 ORTHO05D008345 7.4e-140 501.9 611 49.1
Sopen04g027550 Solanum pennellii HOM05D006715 ORTHO05D008345 2.8e-139 500.0 611 46.8
FAN27G2814 Fragaria x ananassa HOM05D006715 ORTHO05D008345 3.7e-139 499.6 556 52.7
RcHm_v2.0_Chr5g0050861 Rosa chinensis HOM05D006715 ORTHO05D008345 4.5e-137 492.7 523 53.7
Nitab4.5_0001187g0100 Nicotiana tabacum HOM05D006715 ORTHO05D008345 7.6e-137 491.9 628 46.2
Eucgr.F02698 Eucalyptus grandis HOM05D006715 ORTHO05D008345 1.7e-136 490.7 620 47.6
MELO3C025024.2 Cucumis melo HOM05D006715 ORTHO05D008345 4.2e-135 486.1 601 47.6
Peaxi162Scf00599g00121 Petunia axillaris HOM05D006715 ORTHO05D008345 1.2e-134 484.6 631 45.6
SGA_v2.0_scaffold25G11186 Striga asiatica HOM05D006715 ORTHO05D008345 1.2e-134 484.6 616 46.6
Nn5g28769 Nelumbo nucifera HOM05D006715 ORTHO05D008345 1.6e-134 484.2 665 45.7
Glyma.16G166500 Glycine max HOM05D006715 ORTHO05D008345 6.0e-134 482.3 630 48.6
Aqoxy5G00857 Aquilegia oxysepala HOM05D006715 ORTHO05D008345 8.2e-131 471.9 614 46.4
Hund26691 Selenicereus undatus HOM05D006715 ORTHO05D008345 2.6e-129 466.8 605 46.4
Migut.N03207 Erythranthe guttata HOM05D006715 ORTHO05D008345 1.0e-128 464.9 686 43.6
MSTRG.24217 Avicennia marina HOM05D006715 ORTHO05D008345 6.5e-128 462.2 711 41.9
Lsat_1_v5_gn_9_41180 Lactuca sativa HOM05D006715 ORTHO05D008345 6.5e-128 462.2 582 47.9
Sed0009104 Sechium edule HOM05D006715 ORTHO05D008345 2.1e-126 457.2 634 45.4
COL.COLO4_29857 Corchorus olitorius HOM05D006715 ORTHO05D008345 1.7e-123 447.6 497 48.5
THA.LOC104804670 Tarenaya hassleriana HOM05D006715 ORTHO05D008345 4.1e-122 443.0 608 44.7
ECA232G1953 Erigeron canadensis HOM05D006715 ORTHO05D008345 2.6e-121 440.3 585 46.0
CsaV3_6G002600 Cucumis sativus L. HOM05D006715 ORTHO05D008345 1.7e-120 437.6 554 47.5
PSO675G4790 Papaver somniferum HOM05D006715 ORTHO05D008345 5.0e-120 436.0 619 45.2
TPR.G23114 Trifolium pratense HOM05D006715 ORTHO05D008345 3.6e-118 429.9 422 55.5
GSVIVG01034549001 Vitis vinifera HOM05D006715 ORTHO05D008345 2.0e-116 424.1 476 51.5
Rhsim05G0181200 Rhododendron simsii HOM05D006715 ORTHO05D008345 8.2e-115 418.7 513 46.4
vmacro20039 Vaccinium macrocarpon HOM05D006715 ORTHO05D008345 2.4e-114 417.2 635 41.6
Gohir.D06G116900 Gossypium hirsutum HOM05D006715 ORTHO05D008345 8.5e-112 408.7 459 51.0
unitig_21.g20147 Utricularia gibba HOM05D006715 ORTHO05D008345 1.7e-107 394.4 620 40.6
DCAR_010095 Daucus carota HOM05D006715 ORTHO05D008345 2.8e-107 393.7 460 48.5
Thhalv10003905m.g Eutrema salsugineum HOM05D006715 ORTHO05D008345 1.3e-104 384.8 599 41.6
Sp1g32410 Schrenkiella parvula HOM05D006715 ORTHO05D008345 1.3e-104 384.8 596 41.4
Ca_26954_v3 Cicer arietinum L. HOM05D006715 ORTHO05D008345 1.1e-103 381.7 523 48.4
HanXRQChr11g0320291 Helianthus annuus HOM05D006715 ORTHO05D008345 2.7e-102 377.1 590 43.4
SalBow6G6609 Salvia bowleyana HOM05D006715 ORTHO05D008345 8.0e-102 375.6 637 39.4
Aa31LG6G9940 Aethionema arabicum HOM05D006715 ORTHO05D008345 8.8e-101 372.1 617 41.2
CDE12G0089 Ceratophyllum demersum HOM05D006715 ORTHO05D008345 9.1e-98 362.1 611 39.0
AL1G51600 Arabidopsis lyrata HOM05D006715 ORTHO05D008345 1.0e-96 358.6 580 40.0
ATR0820G173 Amborella trichopoda HOM05D006715 ORTHO05D008345 1.6e-94 351.3 608 39.6
BcaB01g02294 Brassica carinata HOM05D006715 ORTHO05D008345 2.7e-94 350.5 616 39.1
AT1G43245 Arabidopsis thaliana HOM05D006715 ORTHO05D008345 8.0e-94 349.0 596 38.9
BcaC04g24108 Brassica carinata HOM05D006715 ORTHO05D008345 6.8e-93 345.9 608 40.5
SHI09071 Sapria himalayana HOM05D006715 ORTHO05D008345 1.2e-92 345.1 689 37.9
Dinv41067 Davidia involucrata HOM05D006715 ORTHO05D008345 2.3e-88 330.9 373 51.2
EL10Ac1g01568 Beta vulgaris HOM05D006715 ORTHO05D008345 3.8e-88 330.1 599 40.1
Os04g0423600 Oryza sativa ssp. japonica HOM05D006715 ORTHO05D008345 6.8e-85 319.3 605 35.7
Zm00001eb083170 Zea mays HOM05D006715 ORTHO05D008345 5.7e-84 316.2 633 36.3
C09p00980 Brassica napus HOM05D006715 ORTHO05D008345 1.0e-80 305.4 513 40.5
BraA09t35760Z Brassica rapa HOM05D006715 ORTHO05D008345 1.3e-80 305.1 514 39.9
BolC9t53031H Brassica oleracea HOM05D006715 ORTHO05D008345 2.9e-80 303.9 611 36.8
A09p00880 Brassica napus HOM05D006715 ORTHO05D008345 3.8e-80 303.5 516 40.1
PGSC0003DMG400024094 Solanum tuberosum HOM05D006715 ORTHO05D008345 5.0e-80 303.1 322 48.4
Cc10_g14930 Coffea canephora HOM05D006715 ORTHO05D008345 1.7e-72 278.1 354 46.9
Lalb_Chr01g0009561 Lupinus albus HOM05D006715 ORTHO05D008345 1.9e-71 274.6 264 54.5
AUR62026687 Chenopodium quinoa HOM05D006715 ORTHO05D008345 9.5e-71 272.3 345 44.9
MBI17_g41095_MAGBIO Magnolia biondii HOM05D006715 ORTHO05D008345 1.8e-69 268.1 367 46.6
CSS0020422 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 9.8e-68 262.3 256 53.1
CARHR035370 Cardamine hirsuta HOM05D006715 ORTHO05D008345 4.9e-67 260.0 435 41.4
Nitab4.5_0002764g0020 Nicotiana tabacum HOM05D006715 ORTHO05D008345 4.9e-67 260.0 336 43.2
Lalb_Chr01g0009551 Lupinus albus HOM05D006715 ORTHO05D008345 2.1e-62 244.6 328 47.0
TAR381G1110 Trochodendron aralioides HOM05D006715 ORTHO05D008345 8.1e-62 242.7 288 47.6
AUR62040600 Chenopodium quinoa HOM05D006715 ORTHO05D008345 4.1e-58 230.3 292 44.9
Lj2g0026984 Lotus japonicus HOM05D006715 ORTHO05D008345 1.0e-56 225.7 204 60.3
Glyma.16G166333 Glycine max HOM05D006715 ORTHO05D008345 5.1e-56 223.4 227 53.7
SEGI_11470 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 9.5e-55 219.2 371 39.4
HPP92_009296 Vanilla planifolia HOM05D006715 ORTHO05D008345 1.4e-53 215.3 365 39.2
Oeu031098.1 Olea europaea HOM05D006715 ORTHO05D008345 7.6e-52 209.5 378 39.9
Potri.005G193701 Populus trichocarpa HOM05D006715 ORTHO05D008345 2.9e-51 207.6 234 48.7
Sc02g0003950 Simmondsia chinensis HOM05D006715 ORTHO05D008345 1.6e-49 201.8 238 45.8
CSS0028068 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 9.6e-47 192.6 235 46.8
Glyma.16G166267 Glycine max HOM05D006715 ORTHO05D008345 3.6e-46 190.7 226 51.8
Carub.0001s3453 Capsella rubella HOM05D006715 ORTHO05D008345 7.1e-42 176.4 301 36.9
SEGI_34185 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 2.0e-36 158.3 462 28.8
Carub.0001s3454 Capsella rubella HOM05D006715 ORTHO05D008345 1.1e-34 152.5 218 43.6
Gohir.1Z049355 Gossypium hirsutum HOM05D006715 ORTHO05D008345 6.0e-33 146.7 136 57.4
SEGI_20433 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 3.9e-32 144.1 283 38.2
HPP92_009297 Vanilla planifolia HOM05D006715 ORTHO05D008345 1.1e-29 136.0 219 37.4
CSS0046539 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 6.4e-27 126.7 147 49.7
Medtr3g062560 Medicago truncatula HOM05D006715 ORTHO05D008345 1.9e-26 125.2 195 48.2
QL02p038810 Quercus lobata HOM05D006715 ORTHO05D008345 2.2e-14 85.1 169 38.5
CSS0020713 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 5.9e-12 77.0 146 38.4
Sc02g0003960 Simmondsia chinensis HOM05D006715 ORTHO05D008345 1.3e-11 75.9 100 51.0
arahy.Tifrunner.gnm1.ann1.12T13Y Arachis hypogaea HOM05D006715 ORTHO05D008345 6.1e-09 67.0 48 64.6
MCO09G489 Micromonas commoda HOM05D006715 ORTHO05D008345 3.0e-08 64.7 321 22.7
Mapoly0101s0047 Marchantia polymorpha HOM05D004492 ORTHO05D005602 1.1e-07 62.8 288 22.9
SEGI_02927 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 1.5e-07 62.4 224 26.8
Zm00001eb413710 Zea mays HOM05D006673 ORTHO05D008458 1.5e-07 62.4 327 23.9
PRCOL_00006858 Prasinoderma coloniale HOM05D004492 ORTHO05D005602 2.0e-07 62.0 131 27.5
Thecc.08G119400 Theobroma cacao HOM05D004492 ORTHO05D005602 2.5e-07 61.6 199 28.1
MCO04G092 Micromonas commoda HOM05D004492 ORTHO05D005602 7.4e-07 60.1 315 24.8
Sc02g0003940 Simmondsia chinensis HOM05D006715 ORTHO05D008345 2.2e-06 58.5 39 66.7
Thecc.08G119000 Theobroma cacao HOM05D004492 ORTHO05D005602 2.8e-06 58.2 152 29.6
TAR381G0879 Trochodendron aralioides HOM05D006715 ORTHO05D008345 6.3e-06 57.0 140 27.1


User provided reference genes

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