Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.16G009700 Carya illinoinensis HOM05D006546 ORTHO05D008362 2.8e-216 755.0 378 100.0
Cfa018304 Carpinus fangiana HOM05D006546 ORTHO05D008362 1.1e-156 557.0 370 78.4
Haze_17787 Corylus avellana HOM05D006546 ORTHO05D008362 3.4e-153 545.4 370 77.6
PGR042G3407 Punica granatum HOM05D006546 ORTHO05D008362 2.7e-150 535.8 363 76.9
Atru.chr13.2063_Atru.chr13.2062 Acer truncatum HOM05D006546 ORTHO05D008362 1.3e-149 533.5 360 75.8
Potri.005G194800 Populus trichocarpa HOM05D006546 ORTHO05D008362 3.0e-149 532.3 369 75.6
GSVIVG01034559001 Vitis vinifera HOM05D006546 ORTHO05D008362 5.0e-149 531.6 363 76.3
Prupe.8G036900 Prunus persica HOM05D006546 ORTHO05D008362 1.5e-148 530.0 367 75.2
TWI34G0343 Tripterygium wilfordii HOM05D006546 ORTHO05D008362 4.3e-148 528.5 366 74.0
Cpa.g.sc49.98 Carica papaya HOM05D006546 ORTHO05D008362 3.6e-147 525.4 367 74.9
MD05G1030000 Malus domestica HOM05D006546 ORTHO05D008362 3.6e-147 525.4 339 79.6
Gorai.002G231100 Gossypium raimondii HOM05D006546 ORTHO05D008362 2.3e-146 522.7 370 74.1
Thecc.08G155700 Theobroma cacao HOM05D006546 ORTHO05D008362 1.5e-145 520.0 367 73.6
Nn5g28792 Nelumbo nucifera HOM05D006546 ORTHO05D008362 2.6e-145 519.2 313 82.4
CANSAT25G3312 Cannabis sativa HOM05D006546 ORTHO05D008362 3.4e-145 518.8 376 71.8
Manes.18G093500 Manihot esculenta HOM05D006546 ORTHO05D008362 3.4e-145 518.8 367 74.1
COL.COLO4_03565 Corchorus olitorius HOM05D006546 ORTHO05D008362 4.4e-145 518.5 371 73.0
CSS0026250 Camellia sinensis var. sinensis HOM05D006546 ORTHO05D008362 1.7e-144 516.5 344 77.6
arahy.Tifrunner.gnm1.ann1.PKA9SD Arachis hypogaea HOM05D006546 ORTHO05D008362 1.4e-143 513.5 361 73.4
Duzib093G0633 Durio zibethinus HOM05D006546 ORTHO05D008362 1.9e-143 513.1 369 72.4
QL02p037672 Quercus lobata HOM05D006546 ORTHO05D008362 2.4e-143 512.7 306 84.6
FAN20G1322 Fragaria x ananassa HOM05D006546 ORTHO05D008362 4.1e-143 511.9 305 83.9
Glyma.16G164900 Glycine max HOM05D006546 ORTHO05D008362 1.2e-142 510.4 342 76.6
vmacro01645 Vaccinium macrocarpon HOM05D006546 ORTHO05D008362 1.6e-142 510.0 312 82.1
Nitab4.5_0006961g0030 Nicotiana tabacum HOM05D006546 ORTHO05D008362 2.1e-142 509.6 308 83.4
FvH4_2g13270 Fragaria vesca HOM05D006546 ORTHO05D008362 6.0e-142 508.1 305 83.6
Lj4A701T20 Lonicera japonica HOM05D006546 ORTHO05D008362 1.3e-141 506.9 358 73.7
Rhsim11G0111500 Rhododendron simsii HOM05D006546 ORTHO05D008362 3.0e-141 505.8 366 72.7
AUR62040584 Chenopodium quinoa HOM05D006546 ORTHO05D008362 3.9e-141 505.4 376 71.3
Phvul.004G092300 Phaseolus vulgaris HOM05D006546 ORTHO05D008362 5.1e-141 505.0 319 80.6
PSO541G2164 Papaver somniferum HOM05D006546 ORTHO05D008362 1.5e-140 503.4 316 80.1
VMungo0464G1775 Vigna mungo HOM05D006546 ORTHO05D008362 1.9e-140 503.1 323 79.9
QL02p038646 Quercus lobata HOM05D006546 ORTHO05D008362 3.3e-140 502.3 301 85.0
Ca_03250_v3 Cicer arietinum L. HOM05D006546 ORTHO05D008362 4.3e-140 501.9 304 83.2
Actinidia17779 Actinidia chinensis HOM05D006546 ORTHO05D008362 5.6e-140 501.5 343 76.4
SGA_v2.0_scaffold195G40788 Striga asiatica HOM05D006546 ORTHO05D008362 5.6e-140 501.5 379 69.9
TAR625G0865 Trochodendron aralioides HOM05D006546 ORTHO05D008362 9.5e-140 500.7 369 71.0
Sopen04g027680 Solanum pennellii HOM05D006546 ORTHO05D008362 1.2e-139 500.4 364 70.6
MELO3C008332.2 Cucumis melo HOM05D006546 ORTHO05D008362 2.1e-139 499.6 365 72.3
Sed0023841 Sechium edule HOM05D006546 ORTHO05D008362 2.8e-139 499.2 365 71.0
Solyc04g071700.3 Solanum lycopersicum HOM05D006546 ORTHO05D008362 3.6e-139 498.8 364 70.6
PGSC0003DMG400006373 Solanum tuberosum HOM05D006546 ORTHO05D008362 3.6e-139 498.8 365 70.7
Lsat_1_v5_gn_1_5280 Lactuca sativa HOM05D006546 ORTHO05D008362 4.7e-139 498.4 345 74.2
HanXRQChr04g0115661 Helianthus annuus HOM05D006546 ORTHO05D008362 6.2e-139 498.0 311 80.7
Medtr6g037530 Medicago truncatula HOM05D006546 ORTHO05D008362 8.1e-139 497.7 336 77.1
SalBow7G0432 Salvia bowleyana HOM05D006546 ORTHO05D008362 1.1e-138 497.3 366 71.0
CsaV3_6G005120 Cucumis sativus L. HOM05D006546 ORTHO05D008362 1.4e-138 496.9 365 72.6
FAN15G0764 Fragaria x ananassa HOM05D006546 ORTHO05D008362 1.4e-138 496.9 313 81.2
Sabra05G0148300 Salix brachista HOM05D006546 ORTHO05D008362 1.4e-138 496.9 424 66.0
MSTRG.1097 Avicennia marina HOM05D006546 ORTHO05D008362 1.8e-138 496.5 363 70.2
Lj2g0010381 Lotus japonicus HOM05D006546 ORTHO05D008362 5.2e-138 495.0 300 83.3
Migut.C00976 Erythranthe guttata HOM05D006546 ORTHO05D008362 6.8e-138 494.6 305 80.7
BraA07t30475Z Brassica rapa HOM05D006546 ORTHO05D008362 1.5e-137 493.4 312 79.2
Psat1g100360 Pisum sativum HOM05D006546 ORTHO05D008362 1.5e-137 493.4 360 72.8
Hund17460 Selenicereus undatus HOM05D006546 ORTHO05D008362 1.5e-137 493.4 363 71.1
AL2G36880 Arabidopsis lyrata HOM05D006546 ORTHO05D008362 2.6e-137 492.7 356 71.9
A07p28390 Brassica napus HOM05D006546 ORTHO05D008362 5.8e-137 491.5 312 78.8
Aqoxy6G00397 Aquilegia oxysepala HOM05D006546 ORTHO05D008362 1.3e-136 490.3 366 70.8
Nitab4.5_0001649g0020 Nicotiana tabacum HOM05D006546 ORTHO05D008362 1.3e-136 490.3 365 72.6
Cc10_g15070 Coffea canephora HOM05D006546 ORTHO05D008362 1.7e-136 490.0 312 77.9
AT1G76730 Arabidopsis thaliana HOM05D006546 ORTHO05D008362 2.2e-136 489.6 356 71.9
ECA247G1092 Erigeron canadensis HOM05D006546 ORTHO05D008362 4.9e-136 488.4 311 77.5
Aa31LG4G6800 Aethionema arabicum HOM05D006546 ORTHO05D008362 4.1e-135 485.3 305 78.7
BcaC08g45513 Brassica carinata HOM05D006546 ORTHO05D008362 4.1e-135 485.3 303 79.5
C06p31830 Brassica napus HOM05D006546 ORTHO05D008362 5.4e-135 485.0 304 79.9
BolC6t38311H Brassica oleracea HOM05D006546 ORTHO05D008362 5.4e-135 485.0 304 79.9
Carub.0002s2364 Capsella rubella HOM05D006546 ORTHO05D008362 1.2e-134 483.8 352 71.6
EL10Ac1g01586 Beta vulgaris HOM05D006546 ORTHO05D008362 4.6e-134 481.9 377 69.0
Thhalv10018779m.g Eutrema salsugineum HOM05D006546 ORTHO05D008362 4.6e-134 481.9 351 71.8
Sp5g31870 Schrenkiella parvula HOM05D006546 ORTHO05D008362 6.0e-134 481.5 323 76.8
unitig_747.g21515 Utricularia gibba HOM05D006546 ORTHO05D008362 3.9e-133 478.8 308 78.9
Sc26g0002400 Simmondsia chinensis HOM05D006546 ORTHO05D008362 1.5e-132 476.9 332 74.1
ATR0584G152 Amborella trichopoda HOM05D006546 ORTHO05D008362 2.8e-131 472.6 306 77.5
BcaB02g07073 Brassica carinata HOM05D006546 ORTHO05D008362 3.1e-130 469.2 287 80.8
CAN.G264.10 Capsicum annuum HOM05D006546 ORTHO05D008362 4.0e-130 468.8 283 82.0
AUR62026675 Chenopodium quinoa HOM05D006546 ORTHO05D008362 2.2e-128 463.0 299 78.9
ClCG08G007080 Citrullus lanatus HOM05D006546 ORTHO05D008362 6.4e-128 461.5 459 58.2
Peaxi162Scf00079g02332 Petunia axillaris HOM05D006546 ORTHO05D008362 8.4e-128 461.1 364 68.1
Oeu002061.1 Olea europaea HOM05D006546 ORTHO05D008362 7.8e-126 454.5 305 75.4
Zm00001eb407750 Zea mays HOM05D006546 ORTHO05D008362 5.6e-124 448.4 301 75.7
HPP92_004409 Vanilla planifolia HOM05D006546 ORTHO05D008362 1.6e-123 446.8 316 72.5
MBI19_g24720_MAGBIO Magnolia biondii HOM05D006546 ORTHO05D008362 1.8e-117 426.8 512 50.8
Os12g0168000 Oryza sativa ssp. japonica HOM05D006546 ORTHO05D008362 2.3e-117 426.4 302 72.5
Mapoly0007s0250 Marchantia polymorpha HOM05D006546 ORTHO05D008362 6.7e-117 424.9 334 65.3
AagrBONN_evm.TU.Sc2ySwM_228.4531 Anthoceros agrestis HOM05D006546 ORTHO05D008362 9.6e-116 421.0 317 67.8
Pp3c18_17520 Physcomitrium patens HOM05D006546 ORTHO05D008362 2.4e-114 416.4 307 68.1
CBR_g53679 Chara braunii HOM05D006546 ORTHO05D008362 5.3e-114 415.2 308 69.2
arahy.Tifrunner.gnm1.ann1.AD4V0Z Arachis hypogaea HOM05D006546 ORTHO05D008362 2.1e-110 403.3 462 51.5
Ciclev10001828m.g Citrus clementina HOM05D006546 ORTHO05D008362 1.9e-108 396.7 295 71.2
SMO340G0128 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 3.7e-107 392.5 289 67.5
Eucgr.F02694 Eucalyptus grandis HOM05D006546 ORTHO05D008362 6.5e-104 381.7 213 89.2
Cre13.g587450 Chlamydomonas reinhardtii HOM05D006546 ORTHO05D008362 1.8e-101 373.6 332 59.6
FAN27G2273 Fragaria x ananassa HOM05D006546 ORTHO05D008362 4.6e-94 349.0 215 82.8
CsaV3_6G005110 Cucumis sativus L. HOM05D006546 ORTHO05D008362 2.8e-91 339.7 365 56.2
CARHR070270 Cardamine hirsuta HOM05D006546 ORTHO05D008362 1.0e-88 331.3 202 82.2
MCO03G555 Micromonas commoda HOM05D006546 ORTHO05D008362 3.0e-85 319.7 335 52.2
Dinv41054 Davidia involucrata HOM05D006546 ORTHO05D008362 5.1e-85 318.9 168 94.0
Gohir.A01G197500 Gossypium hirsutum HOM05D006546 ORTHO05D008362 3.4e-81 306.2 254 66.9
Gohir.D01G187700 Gossypium hirsutum HOM05D006546 ORTHO05D008362 7.7e-81 305.1 254 66.5
TPR.G28004 Trifolium pratense HOM05D006546 ORTHO05D008362 5.5e-79 298.9 362 51.1
Ah.14g079510 Amaranthus hybridus HOM05D006546 ORTHO05D008362 2.7e-78 296.6 205 76.1
TPR.G39968 Trifolium pratense HOM05D006546 ORTHO05D008362 1.4e-74 284.3 166 86.7
RcHm_v2.0_Chr6g0274681 Rosa chinensis HOM05D006546 ORTHO05D008362 4.1e-74 282.7 165 85.5
Ah.00g001170 Amaranthus hybridus HOM05D006546 ORTHO05D008362 4.5e-73 279.3 196 75.0
Ah.14g079490 Amaranthus hybridus HOM05D006546 ORTHO05D008362 1.0e-72 278.1 196 74.5
FAN24G0701 Fragaria x ananassa HOM05D006546 ORTHO05D008362 9.4e-71 271.6 190 75.3
SMO137G0185 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 1.2e-70 271.2 260 51.5
THA.LOC104810664 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 6.1e-70 268.9 149 86.6
Eucgr.K02158 Eucalyptus grandis HOM05D006546 ORTHO05D008362 3.2e-63 246.5 193 67.4
Glyma.02G080402 Glycine max HOM05D006546 ORTHO05D008362 4.7e-62 242.7 146 80.8
THA.LOC104803355 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 4.8e-59 232.6 217 60.4
SMO182G0010 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 5.4e-58 229.2 271 46.5
THA.LOC104820721 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 2.6e-52 210.3 143 74.1
Ah.04g160680 Amaranthus hybridus HOM05D006546 ORTHO05D008362 9.2e-42 175.3 110 81.8
SEGI_13550 Sequoiadendron giganteum HOM05D006546 ORTHO05D008362 4.3e-39 166.4 97 78.4
CDE08G0315 Ceratophyllum demersum HOM05D006546 ORTHO05D008362 1.1e-34 151.8 109 67.9
MCO02G484 Micromonas commoda HOM05D006546 ORTHO05D008362 1.5e-31 141.4 235 35.3
ECA247G1774 Erigeron canadensis HOM05D006546 ORTHO05D000004 4.7e-30 136.3 80 83.8
Hund17461 Selenicereus undatus HOM05D000185 ORTHO05D000105 1.9e-23 114.4 259 32.4
SMO063G0001 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 1.2e-22 111.7 97 53.6
Medtr6g037560 Medicago truncatula HOM05D006546 ORTHO05D008362 2.1e-14 84.3 47 78.7
AagrBONN_evm.TU.Sc2ySwM_228.4528 Anthoceros agrestis HOM05D006546 ORTHO05D008362 3.8e-11 73.6 47 78.7
Sabra02G0052700 Salix brachista HOM05D003387 ORTHO05D005400 7.1e-10 69.3 158 33.5


User provided reference genes

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