Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.15G183400 Carya illinoinensis HOM05D007673 ORTHO05D009278 2.2e-80 302.4 164 100.0
CiPaw.16G118400 Carya illinoinensis HOM05D007673 ORTHO05D009278 2.6e-33 146.0 162 59.3
QL02p091069 Quercus lobata HOM05D007673 ORTHO05D009278 1.9e-31 139.8 165 60.6
Dinv41432 Davidia involucrata HOM05D007673 ORTHO05D009278 2.0e-25 119.8 165 51.5
TAR383G0338 Trochodendron aralioides HOM05D007673 ORTHO05D009278 1.4e-23 113.6 164 44.5
COL.COLO4_24126 Corchorus olitorius HOM05D007673 ORTHO05D009278 3.2e-23 112.5 163 44.2
Manes.06G043400 Manihot esculenta HOM05D007673 ORTHO05D009278 6.0e-22 108.2 166 47.6
Sabra06G0043300 Salix brachista HOM05D007673 ORTHO05D009278 6.0e-22 108.2 165 43.6
Potri.006G060000 Populus trichocarpa HOM05D007673 ORTHO05D009278 7.8e-22 107.8 165 47.9
TAR625G1436 Trochodendron aralioides HOM05D007673 ORTHO05D009278 2.3e-21 106.3 164 43.9
GSVIVG01012874001 Vitis vinifera HOM05D007673 ORTHO05D009278 2.5e-20 102.8 157 45.9
Manes.14G120200 Manihot esculenta HOM05D007673 ORTHO05D009278 4.3e-20 102.1 167 54.5
Thecc.09G139900 Theobroma cacao HOM05D007673 ORTHO05D009278 5.6e-20 101.7 165 44.8
CSS0039366 Camellia sinensis var. sinensis HOM05D007673 ORTHO05D009278 2.8e-19 99.4 164 40.9
Dinv43178 Davidia involucrata HOM05D007673 ORTHO05D009278 4.0e-18 95.5 164 43.3
Rhsim01G0051900 Rhododendron simsii HOM05D007673 ORTHO05D009278 1.5e-17 93.6 191 37.2
Prupe.7G256100 Prunus persica HOM05D007673 ORTHO05D009278 2.0e-17 93.2 175 46.3
Cc06_g07510 Coffea canephora HOM05D007673 ORTHO05D009278 9.9e-17 90.9 172 43.0
Nn2g12220 Nelumbo nucifera HOM05D007673 ORTHO05D009278 9.9e-17 90.9 164 46.3
Actinidia21918 Actinidia chinensis HOM05D007673 ORTHO05D009278 2.9e-16 89.4 169 46.2
Lalb_Chr07g0179441 Lupinus albus HOM05D007673 ORTHO05D009278 4.9e-16 88.6 165 41.2
Potri.018G115601 Populus trichocarpa HOM05D007673 ORTHO05D009278 8.4e-16 87.8 164 42.7
MD02G1016300 Malus domestica HOM05D007673 ORTHO05D009278 1.1e-15 87.4 163 43.6
Glyma.17G106100 Glycine max HOM05D007673 ORTHO05D009278 1.9e-15 86.7 166 38.0
Nn8g39681 Nelumbo nucifera HOM05D007673 ORTHO05D009278 4.2e-15 85.5 165 41.2
Peaxi162Scf00088g00016 Petunia axillaris HOM05D007673 ORTHO05D009278 4.2e-15 85.5 165 46.1
CAN.G877.9 Capsicum annuum HOM05D007673 ORTHO05D009278 2.7e-14 82.8 168 41.7
Actinidia04238 Actinidia chinensis HOM05D007673 ORTHO05D009278 4.6e-14 82.0 165 37.0
Glyma.13G165000 Glycine max HOM05D007673 ORTHO05D009278 4.6e-14 82.0 165 38.2
Lalb_Chr13g0301271 Lupinus albus HOM05D007673 ORTHO05D009278 4.6e-14 82.0 169 40.2
MBI14_g03622_MAGBIO Magnolia biondii HOM05D007673 ORTHO05D009278 4.6e-14 82.0 164 36.6
MD15G1160900 Malus domestica HOM05D007673 ORTHO05D009278 4.6e-14 82.0 160 38.1
Aqoxy7G03558 Aquilegia oxysepala HOM05D007673 ORTHO05D009278 6.0e-14 81.6 167 38.9
Gohir.A05G012100 Gossypium hirsutum HOM05D007673 ORTHO05D009278 1.0e-13 80.9 166 45.2
Gohir.D05G013100 Gossypium hirsutum HOM05D007673 ORTHO05D009278 1.3e-13 80.5 167 46.1
Gorai.009G013100 Gossypium raimondii HOM05D007673 ORTHO05D009278 1.3e-13 80.5 167 46.1
PGSC0003DMG400030693 Solanum tuberosum HOM05D007673 ORTHO05D009278 6.6e-13 78.2 167 35.9
TWI34G1167 Tripterygium wilfordii HOM05D007673 ORTHO05D009278 4.3e-12 75.5 165 37.0
FvH4_1g01840 Fragaria vesca HOM05D022859 ORTHO05D009278 7.3e-12 74.7 166 36.1
Medtr2g450420 Medicago truncatula HOM05D007673 ORTHO05D009278 7.3e-12 74.7 167 34.7
Psat0s503g0080 Pisum sativum HOM05D007673 ORTHO05D009278 7.3e-12 74.7 165 37.0
Psat0s5432g0040 Pisum sativum HOM05D007673 ORTHO05D009278 7.3e-12 74.7 165 37.0
FAN28G1648 Fragaria x ananassa HOM05D022859 ORTHO05D009278 1.6e-11 73.6 168 35.7
TWI32G1294 Tripterygium wilfordii HOM05D007673 ORTHO05D009278 4.7e-11 72.0 167 36.5
Lj6g0015094 Lotus japonicus HOM05D007673 ORTHO05D009278 6.2e-11 71.6 165 37.0
Phvul.009G210216 Phaseolus vulgaris HOM05D007673 ORTHO05D009278 1.1e-10 70.9 166 36.1
Phvul.003G173600 Phaseolus vulgaris HOM05D007673 ORTHO05D009278 1.4e-10 70.5 166 34.9
Solyc07g007270.3 Solanum lycopersicum HOM05D007673 ORTHO05D009278 1.8e-10 70.1 167 35.3
VMungo1215G2163 Vigna mungo HOM05D007673 ORTHO05D009278 1.8e-10 70.1 165 37.0
Sopen07g003330 Solanum pennellii HOM05D007673 ORTHO05D009278 6.9e-10 68.2 167 35.3
Nitab4.5_0008829g0020 Nicotiana tabacum HOM05D007673 ORTHO05D009278 1.2e-09 67.4 140 42.1
PSO017G0897 Papaver somniferum HOM05D007673 ORTHO05D009278 1.2e-09 67.4 175 36.0
Nitab4.5_0003305g0020 Nicotiana tabacum HOM05D007673 ORTHO05D009278 2.0e-09 66.6 142 42.3
arahy.Tifrunner.gnm1.ann1.5L22XG Arachis hypogaea HOM05D007673 ORTHO05D009278 3.4e-09 65.9 165 32.1
PSO170G6343 Papaver somniferum HOM05D007673 ORTHO05D009278 3.4e-09 65.9 170 34.7
FAN26G0562 Fragaria x ananassa HOM05D022859 ORTHO05D009278 4.4e-09 65.5 208 32.2
VMungo1309G0908 Vigna mungo HOM05D007673 ORTHO05D009278 4.4e-09 65.5 168 35.1
Peaxi162Scf00108g00316 Petunia axillaris HOM05D007673 ORTHO05D009278 1.3e-08 63.9 167 39.5
Medtr4g116360 Medicago truncatula HOM05D007673 ORTHO05D009278 4.9e-08 62.0 162 35.8
FAN19G1896 Fragaria x ananassa HOM05D022859 ORTHO05D009278 1.1e-07 60.8 180 30.6
MSTRG.6086 Avicennia marina HOM05D007673 ORTHO05D009278 1.4e-07 60.5 165 32.7
Cfa020903 Carpinus fangiana HOM05D012006 ORTHO05D014172 1.4e-07 60.5 78 57.7
Dinv42922 Davidia involucrata HOM05D012006 ORTHO05D014172 1.4e-07 60.5 74 51.4
HanXRQChr09g0243101 Helianthus annuus HOM05D007673 ORTHO05D009278 1.9e-07 60.1 164 34.8
CsaV3_1G028420 Cucumis sativus L. HOM05D007673 ORTHO05D009278 2.4e-07 59.7 150 34.7
Potri.006G059900 Populus trichocarpa HOM05D012006 ORTHO05D014172 3.2e-07 59.3 75 48.0
PGR102G0920 Punica granatum HOM05D007673 ORTHO05D009278 3.2e-07 59.3 165 35.8
MBI15_g28791_MAGBIO Magnolia biondii HOM05D007673 ORTHO05D009278 4.2e-07 58.9 121 34.7
Lsat_1_v5_gn_7_45981 Lactuca sativa HOM05D007673 ORTHO05D009278 9.3e-07 57.8 169 32.5
EL10Ac8g18805 Beta vulgaris HOM05D022392 ORTHO05D009278 2.1e-06 56.6 176 31.2
AUR62041460 Chenopodium quinoa HOM05D022392 ORTHO05D009278 2.1e-06 56.6 181 33.1
ECA240G3592 Erigeron canadensis HOM05D007673 ORTHO05D009278 2.1e-06 56.6 165 34.5
Eucgr.C04106 Eucalyptus grandis HOM05D007673 ORTHO05D009278 2.1e-06 56.6 98 41.8
AUR62011243 Chenopodium quinoa HOM05D022392 ORTHO05D009278 4.6e-06 55.5 179 33.0
Oeu051709.1 Olea europaea HOM05D007673 ORTHO05D009278 4.6e-06 55.5 166 31.9
Sed0013238 Sechium edule HOM05D007673 ORTHO05D009278 6.0e-06 55.1 156 31.4
Glyma.09G094100 Glycine max HOM05D012006 ORTHO05D014172 7.8e-06 54.7 74 45.9


User provided reference genes

Program Settings