Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.15G176100 Carya illinoinensis HOM05D000759 ORTHO05D128354 4.7e-23 110.2 49 100.0
CiPaw.15G175500 Carya illinoinensis HOM05D000759 ORTHO05D000574 4.7e-07 57.0 31 87.1
SEGI_27360 Sequoiadendron giganteum HOM05D000759 ORTHO05D000574 1.1e-06 55.8 31 80.6
CiPaw.08G006300 Carya illinoinensis HOM05D000759 ORTHO05D000574 1.4e-06 55.5 31 80.6
Dinv42866 Davidia involucrata HOM05D000759 ORTHO05D000574 1.4e-06 55.5 31 83.9
Dinv43234 Davidia involucrata HOM05D000759 ORTHO05D000574 1.4e-06 55.5 31 83.9
Manes.16G129100 Manihot esculenta HOM05D000759 ORTHO05D000574 1.4e-06 55.5 31 80.6
Cfa020835 Carpinus fangiana HOM05D000759 ORTHO05D000574 1.8e-06 55.1 31 80.6
Cfa020836 Carpinus fangiana HOM05D000759 ORTHO05D000574 1.8e-06 55.1 31 80.6
CiPaw.16G113800 Carya illinoinensis HOM05D000759 ORTHO05D000574 1.8e-06 55.1 31 80.6
Haze_19219 Corylus avellana HOM05D000759 ORTHO05D000574 1.8e-06 55.1 31 80.6
CiPaw.07G229700 Carya illinoinensis HOM05D000759 ORTHO05D000574 2.3e-06 54.7 32 78.1
Atru.chr7.2543 Acer truncatum HOM05D000759 ORTHO05D000574 3.1e-06 54.3 31 80.6
Actinidia04292 Actinidia chinensis HOM05D000759 ORTHO05D000574 3.1e-06 54.3 31 80.6
EL10Ac2g04115 Beta vulgaris HOM05D000759 ORTHO05D000574 3.1e-06 54.3 31 80.6
EL10Ac8g18854 Beta vulgaris HOM05D000759 ORTHO05D000574 3.1e-06 54.3 31 80.6
CSS0040762 Camellia sinensis var. sinensis HOM05D000759 ORTHO05D000574 3.1e-06 54.3 31 80.6
Cpa.g.sc127.30 Carica papaya HOM05D000759 ORTHO05D000574 3.1e-06 54.3 31 80.6
Cfa013063 Carpinus fangiana HOM05D000759 ORTHO05D000574 3.1e-06 54.3 31 80.6
Haze_21423 Corylus avellana HOM05D000759 ORTHO05D000574 3.1e-06 54.3 31 80.6
CsaV3_4G036600 Cucumis sativus L. HOM05D000759 ORTHO05D000574 3.1e-06 54.3 31 80.6
MD00G1143700 Malus domestica HOM05D000759 ORTHO05D000574 3.1e-06 54.3 31 80.6
Os08g0280200 Oryza sativa ssp. japonica HOM05D000759 ORTHO05D000574 3.1e-06 54.3 31 77.4
Prupe.1G393200 Prunus persica HOM05D000759 ORTHO05D000574 3.1e-06 54.3 31 80.6
SalBow4G0227 Salvia bowleyana HOM05D000759 ORTHO05D000574 3.1e-06 54.3 31 80.6
Sed0004730 Sechium edule HOM05D000759 ORTHO05D000574 3.1e-06 54.3 31 80.6
Sed0026649 Sechium edule HOM05D000759 ORTHO05D000574 3.1e-06 54.3 31 80.6
GSVIVG01035957001 Vitis vinifera HOM05D000759 ORTHO05D000574 3.1e-06 54.3 31 80.6
Zm00001eb176750 Zea mays HOM05D000759 ORTHO05D000574 3.1e-06 54.3 31 77.4
Ah.14g078280 Amaranthus hybridus HOM05D000759 ORTHO05D000574 4.0e-06 53.9 32 75.0
Dinv40975 Davidia involucrata HOM05D000759 ORTHO05D000574 4.0e-06 53.9 31 80.6
Ciclev10027690m.g Citrus clementina HOM05D000759 ORTHO05D000574 5.2e-06 53.5 31 80.6
Cc06_g15130 Coffea canephora HOM05D000759 ORTHO05D000574 5.2e-06 53.5 31 80.6
Potri.006G263700 Populus trichocarpa HOM05D000759 ORTHO05D000574 5.2e-06 53.5 35 74.3
Hma1.2p1_0028F.1_g017480 Hydrangea macrophylla HOM05D000759 ORTHO05D000574 6.8e-06 53.1 31 77.4
Lalb_Chr24g0402011 Lupinus albus HOM05D000759 ORTHO05D000574 6.8e-06 53.1 31 77.4
Sc18g0000010 Simmondsia chinensis HOM05D000759 ORTHO05D000574 6.8e-06 53.1 31 77.4
HPP92_021961 Vanilla planifolia HOM05D000759 ORTHO05D000574 6.8e-06 53.1 31 77.4
Ah.16g105040 Amaranthus hybridus HOM05D000759 ORTHO05D000574 8.9e-06 52.8 31 74.2
ATR0739G179 Amborella trichopoda HOM05D000759 ORTHO05D000574 8.9e-06 52.8 31 77.4
CSS0000133 Camellia sinensis var. sinensis HOM05D000759 ORTHO05D000574 8.9e-06 52.8 31 77.4
CDE01G0773 Ceratophyllum demersum HOM05D000759 ORTHO05D000574 8.9e-06 52.8 31 77.4
ClCG06G012330 Citrullus lanatus HOM05D000759 ORTHO05D000574 8.9e-06 52.8 31 80.6
Ciclev10007257m.g Citrus clementina HOM05D000759 ORTHO05D000574 8.9e-06 52.8 31 77.4
CsaV3_1G024320 Cucumis sativus L. HOM05D000759 ORTHO05D000574 8.9e-06 52.8 31 80.6
Duzib168G1284 Durio zibethinus HOM05D000759 ORTHO05D000574 8.9e-06 52.8 31 77.4
FvH4_2g41080 Fragaria vesca HOM05D000759 ORTHO05D000574 8.9e-06 52.8 31 77.4
PSO384G1069 Papaver somniferum HOM05D000759 ORTHO05D000574 8.9e-06 52.8 31 77.4
QL02p018982 Quercus lobata HOM05D000759 ORTHO05D000574 8.9e-06 52.8 31 77.4
QL02p093050 Quercus lobata HOM05D000759 ORTHO05D000574 8.9e-06 52.8 31 80.6
RcHm_v2.0_Chr6g0299461 Rosa chinensis HOM05D000759 ORTHO05D000574 8.9e-06 52.8 31 77.4
Thecc.09G016300 Theobroma cacao HOM05D000759 ORTHO05D000574 8.9e-06 52.8 31 77.4


User provided reference genes

Program Settings