Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.15G168700 Carya illinoinensis HOM05D005968 ORTHO05D007158 8.1e-105 383.6 180 100.0
CiPaw.15G168400 Carya illinoinensis HOM05D005968 ORTHO05D007158 1.4e-96 356.3 186 90.9
CiPaw.16G111000 Carya illinoinensis HOM05D005968 ORTHO05D007158 6.9e-96 354.0 186 90.9
Manes.14G143600 Manihot esculenta HOM05D005968 ORTHO05D007158 3.2e-93 345.1 186 87.6
Thecc.09G030600 Theobroma cacao HOM05D005968 ORTHO05D007158 5.4e-93 344.4 186 86.6
Glyma.02G204100 Glycine max HOM05D005968 ORTHO05D007158 2.7e-92 342.0 186 84.9
Duzib187G1838 Durio zibethinus HOM05D005968 ORTHO05D007158 7.9e-92 340.5 186 84.9
Lj4g0027447 Lotus japonicus HOM05D005968 ORTHO05D007158 7.9e-92 340.5 186 85.5
Gohir.D08G273400 Gossypium hirsutum HOM05D005968 ORTHO05D007158 1.0e-91 340.1 186 85.5
Gorai.004G291800 Gossypium raimondii HOM05D005968 ORTHO05D007158 1.0e-91 340.1 186 86.0
Prupe.7G263000 Prunus persica HOM05D005968 ORTHO05D007158 2.3e-91 339.0 186 86.6
CANSAT11G2689 Cannabis sativa HOM05D005968 ORTHO05D007158 8.7e-91 337.0 186 83.9
Dinv41378 Davidia involucrata HOM05D005968 ORTHO05D007158 1.5e-90 336.3 186 84.9
Gohir.A08G251800 Gossypium hirsutum HOM05D005968 ORTHO05D007158 1.5e-90 336.3 186 84.9
Glyma.17G073700 Glycine max HOM05D005968 ORTHO05D007158 1.9e-90 335.9 186 84.4
Nn8g39893 Nelumbo nucifera HOM05D005968 ORTHO05D007158 1.9e-90 335.9 186 84.4
Potri.006G184300 Populus trichocarpa HOM05D005968 ORTHO05D007158 5.6e-90 334.3 186 83.3
CSS0021374 Camellia sinensis var. sinensis HOM05D005968 ORTHO05D007158 2.1e-89 332.4 186 84.9
FvH4_1g00920 Fragaria vesca HOM05D005968 ORTHO05D007158 3.6e-89 331.6 186 83.9
PSO561G0082 Papaver somniferum HOM05D005968 ORTHO05D007158 6.2e-89 330.9 186 83.3
Dinv42854 Davidia involucrata HOM05D005968 ORTHO05D007158 8.1e-89 330.5 186 84.4
DCAR_019393 Daucus carota HOM05D005968 ORTHO05D007158 1.1e-88 330.1 186 83.9
PSO111G0029 Papaver somniferum HOM05D005968 ORTHO05D007158 1.1e-88 330.1 186 83.3
Atru.chr7.47_Atru.chr7.48 Acer truncatum HOM05D005968 ORTHO05D007158 1.8e-88 329.3 186 83.3
Potri.018G106700 Populus trichocarpa HOM05D005968 ORTHO05D007158 5.3e-88 327.8 186 81.7
Ciclev10008980m.g Citrus clementina HOM05D005968 ORTHO05D007158 6.9e-88 327.4 186 82.8
Hma1.2p1_0222F.1_g093590 Hydrangea macrophylla HOM05D005968 ORTHO05D007158 9.0e-88 327.0 188 83.0
Nn2g12378 Nelumbo nucifera HOM05D005968 ORTHO05D007158 9.0e-88 327.0 185 83.2
Sed0018428 Sechium edule HOM05D005968 ORTHO05D007158 9.0e-88 327.0 186 82.3
THA.LOC104803560 Tarenaya hassleriana HOM05D005968 ORTHO05D007158 1.5e-87 326.2 186 81.7
ECA236G4418 Erigeron canadensis HOM05D005968 ORTHO05D007158 3.4e-87 325.1 186 81.7
Thhalv10025727m.g Eutrema salsugineum HOM05D005968 ORTHO05D007158 4.5e-87 324.7 186 80.6
QL02p093270 Quercus lobata HOM05D005968 ORTHO05D007158 4.5e-87 324.7 186 83.9
CARHR238800 Cardamine hirsuta HOM05D005968 ORTHO05D007158 7.6e-87 323.9 186 80.1
PGR102G1528 Punica granatum HOM05D005968 ORTHO05D007158 7.6e-87 323.9 186 82.8
Carub.0007s0964 Capsella rubella HOM05D005968 ORTHO05D007158 9.9e-87 323.6 186 79.6
AL7G21190 Arabidopsis lyrata HOM05D005968 ORTHO05D007158 1.7e-86 322.8 186 79.6
PGSC0003DMG400011184 Solanum tuberosum HOM05D005968 ORTHO05D007158 1.1e-85 320.1 186 81.2
AT4G30900 Arabidopsis thaliana HOM05D005968 ORTHO05D007158 1.4e-85 319.7 186 79.0
Sp7g28770 Schrenkiella parvula HOM05D005968 ORTHO05D007158 1.4e-85 319.7 186 79.6
TAR626G1902 Trochodendron aralioides HOM05D005968 ORTHO05D007158 1.9e-85 319.3 185 82.2
Eucgr.C02493 Eucalyptus grandis HOM05D005968 ORTHO05D007158 2.4e-85 318.9 186 81.2
EL10Ac8g18668 Beta vulgaris HOM05D005968 ORTHO05D007158 3.2e-85 318.5 186 80.1
FAN23G3092 Fragaria x ananassa HOM05D005968 ORTHO05D007158 1.6e-84 316.2 186 81.2
Aqoxy2G01962_Aqoxy2G01963 Aquilegia oxysepala HOM05D005968 ORTHO05D007158 1.3e-83 313.2 190 78.4
Migut.K00326 Erythranthe guttata HOM05D005968 ORTHO05D007158 1.8e-83 312.8 186 79.0
HanXRQChr09g0245781 Helianthus annuus HOM05D005968 ORTHO05D007158 3.9e-83 311.6 186 80.1
Zm00001eb086780 Zea mays HOM05D005968 ORTHO05D007158 1.3e-81 306.6 187 76.5
BolC1t00793H Brassica oleracea HOM05D005968 ORTHO05D007158 3.7e-81 305.1 191 77.5
BcaC09g51877 Brassica carinata HOM05D005968 ORTHO05D007158 8.1e-81 303.9 191 77.0
A01p07280 Brassica napus HOM05D005968 ORTHO05D007158 8.1e-81 303.9 191 77.0
BraA01t00677Z Brassica rapa HOM05D005968 ORTHO05D007158 8.1e-81 303.9 191 77.0
BcaNung03430 Brassica carinata HOM05D005968 ORTHO05D007158 1.1e-80 303.5 186 77.4
Zm00001eb420110 Zea mays HOM05D005968 ORTHO05D007158 2.4e-80 302.4 187 75.9
arahy.Tifrunner.gnm1.ann1.D6JQQQ Arachis hypogaea HOM05D005968 ORTHO05D007158 5.3e-80 301.2 186 78.0
C01p08040 Brassica napus HOM05D005968 ORTHO05D007158 6.9e-80 300.8 191 76.4
Psat0s2403g0360 Pisum sativum HOM05D005968 ORTHO05D007158 2.0e-79 299.3 188 77.1
MD15G1144700 Malus domestica HOM05D005968 ORTHO05D007158 2.2e-78 295.8 186 78.0
DCAR_017911 Daucus carota HOM05D005968 ORTHO05D007158 1.9e-77 292.7 192 74.0
SalBow1G6433 Salvia bowleyana HOM05D005968 ORTHO05D007158 1.9e-77 292.7 186 75.8
MD02G1007400 Malus domestica HOM05D005968 ORTHO05D007158 7.1e-77 290.8 186 75.8
FAN26G1763 Fragaria x ananassa HOM05D005968 ORTHO05D007158 1.2e-76 290.0 186 75.8
Lsat_1_v5_gn_8_63401 Lactuca sativa HOM05D005968 ORTHO05D007158 2.1e-76 289.3 186 76.3
Sabra06G0140100 Salix brachista HOM05D005968 ORTHO05D007158 1.0e-75 287.0 267 56.9
Ca_21128_v3 Cicer arietinum L. HOM05D005968 ORTHO05D007158 1.3e-75 286.6 183 74.9
Cfa020826 Carpinus fangiana HOM05D002374 ORTHO05D003594 2.3e-75 285.8 177 78.5
SEGI_19747 Sequoiadendron giganteum HOM05D005968 ORTHO05D007158 1.3e-73 280.0 192 69.3
Sabra18G0090900 Salix brachista HOM05D005968 ORTHO05D007158 2.8e-73 278.9 238 60.1
Lj7A459G65 Lonicera japonica HOM05D005968 ORTHO05D007158 8.2e-73 277.3 186 74.7
VMungo1215G2113 Vigna mungo HOM05D005968 ORTHO05D007158 8.2e-73 277.3 186 71.5
Peaxi162Scf00401g00718 Petunia axillaris HOM05D005968 ORTHO05D007158 5.0e-70 268.1 186 71.5
Phvul.003G156000 Phaseolus vulgaris HOM05D005968 ORTHO05D007158 1.2e-68 263.5 157 80.3
Mapoly0088s0077 Marchantia polymorpha HOM05D005968 ORTHO05D007158 3.9e-67 258.5 186 64.5
COL.COLO4_18810 Corchorus olitorius HOM05D000238 ORTHO05D007158 6.7e-67 257.7 186 69.9
Actinidia38673 Actinidia chinensis HOM05D005968 ORTHO05D007158 8.2e-65 250.8 153 78.4
ATR0739G020 Amborella trichopoda HOM05D005968 ORTHO05D007158 1.2e-55 220.3 186 60.2
AUR62029822 Chenopodium quinoa HOM05D005968 ORTHO05D007158 1.5e-55 219.9 146 74.0
unitig_52.g17565 Utricularia gibba HOM05D005968 ORTHO05D007158 1.7e-54 216.5 205 55.6
CsaV3_1G028970 Cucumis sativus L. HOM05D005968 ORTHO05D007158 5.5e-53 211.5 186 58.6
GSVIVG01023605001 Vitis vinifera HOM05D005968 ORTHO05D007158 1.8e-51 206.5 117 82.1
AUR62006466 Chenopodium quinoa HOM05D005968 ORTHO05D007158 5.2e-51 204.9 119 81.5
Lalb_Chr12g0198701 Lupinus albus HOM05D005968 ORTHO05D007158 6.7e-51 204.5 117 80.3
TWI34G0179 Tripterygium wilfordii HOM05D005968 ORTHO05D007158 1.5e-50 203.4 186 59.1
TPR.G24874 Trifolium pratense HOM05D005968 ORTHO05D007158 2.6e-50 202.6 117 78.6
Medtr4g130840 Medicago truncatula HOM05D005968 ORTHO05D007158 2.8e-49 199.1 117 76.9
RcHm_v2.0_Chr2g0085621 Rosa chinensis HOM05D005968 ORTHO05D007158 4.8e-49 198.4 117 78.6
ClCG06G012410 Citrullus lanatus HOM05D005968 ORTHO05D007158 8.2e-49 197.6 117 78.6
MELO3C010224.2 Cucumis melo HOM05D005968 ORTHO05D007158 8.2e-49 197.6 117 78.6
Dinv43246 Davidia involucrata HOM05D005968 ORTHO05D007158 1.1e-48 197.2 117 80.3
AagrBONN_evm.TU.Sc2ySwM_362.192 Anthoceros agrestis HOM05D005968 ORTHO05D007158 2.0e-47 193.0 178 51.7
Cc06_g14960 Coffea canephora HOM05D005968 ORTHO05D007158 2.6e-47 192.6 117 76.9
Sopen07g001730 Solanum pennellii HOM05D005968 ORTHO05D007158 5.9e-47 191.4 117 76.9
Solyc07g005620.2 Solanum lycopersicum HOM05D005968 ORTHO05D007158 1.3e-46 190.3 117 76.1
Oeu038141.1 Olea europaea HOM05D005968 ORTHO05D007158 2.1e-44 183.0 117 73.5
SGA_v2.0_scaffold347G49545 Striga asiatica HOM05D005968 ORTHO05D007158 5.2e-43 178.3 214 48.1
Os05g0279600 Oryza sativa ssp. japonica HOM05D005968 ORTHO05D007158 8.8e-43 177.6 116 70.7
Cpa.g.sc46.156 Carica papaya HOM05D005968 ORTHO05D007158 2.6e-42 176.0 137 66.4
Aa31LG2G19470 Aethionema arabicum HOM05D005968 ORTHO05D007158 1.7e-41 173.3 110 72.7
HPP92_004698 Vanilla planifolia HOM05D005968 ORTHO05D007158 1.7e-41 173.3 118 72.0
Lsat_1_v5_gn_7_66900 Lactuca sativa HOM05D005968 ORTHO05D007158 2.8e-33 146.0 129 61.2
Nitab4.5_0003623g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 4.8e-33 145.2 179 48.0
Nitab4.5_0009876g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 2.0e-31 139.8 69 92.8
Lsat_1_v5_gn_4_18721 Lactuca sativa HOM05D005968 ORTHO05D007158 3.0e-27 125.9 67 85.1
CDE04G1812 Ceratophyllum demersum HOM05D005968 ORTHO05D007158 1.3e-25 120.6 82 65.9
TAR636G0142 Trochodendron aralioides HOM05D002374 ORTHO05D003594 6.6e-22 108.2 71 73.2
Lsat_1_v5_gn_4_18741 Lactuca sativa HOM05D005968 ORTHO05D007158 9.5e-21 104.4 80 63.8
arahy.Tifrunner.gnm1.ann1.HW7BNQ Arachis hypogaea HOM05D005968 ORTHO05D007158 4.7e-20 102.1 50 92.0
FAN28G0447 Fragaria x ananassa HOM05D005968 ORTHO05D007158 4.7e-20 102.1 50 92.0
RcHm_v2.0_Chr2g0085611 Rosa chinensis HOM05D005968 ORTHO05D007158 4.7e-20 102.1 50 92.0
TPR.G24830 Trifolium pratense HOM05D005968 ORTHO05D007158 4.7e-20 102.1 50 92.0
Oeu038140.1 Olea europaea HOM05D005968 ORTHO05D007158 6.1e-20 101.7 50 92.0
Cpa.g.sc46.157 Carica papaya HOM05D005968 ORTHO05D007158 8.0e-20 101.3 50 92.0
GSVIVG01023606001 Vitis vinifera HOM05D005968 ORTHO05D007158 1.0e-19 100.9 50 92.0
Lalb_Chr12g0198711 Lupinus albus HOM05D005968 ORTHO05D007158 2.3e-19 99.8 50 90.0
Cc06_g14950 Coffea canephora HOM05D005968 ORTHO05D007158 3.0e-19 99.4 50 92.0
CAN.G160.61 Capsicum annuum HOM05D005968 ORTHO05D007158 5.2e-19 98.6 50 90.0
Sopen07g001720 Solanum pennellii HOM05D005968 ORTHO05D007158 5.2e-19 98.6 50 90.0
Sc17g0006690 Simmondsia chinensis HOM05D005968 ORTHO05D007158 6.8e-19 98.2 50 90.0
Eucgr.C02540 Eucalyptus grandis HOM05D005968 ORTHO05D007158 1.5e-18 97.1 50 88.0
Eucgr.C02541 Eucalyptus grandis HOM05D005968 ORTHO05D007158 1.5e-18 97.1 58 77.6
MSTRG.26272 Avicennia marina HOM05D005968 ORTHO05D007158 2.6e-18 96.3 50 86.0
Medtr4g130830 Medicago truncatula HOM05D005968 ORTHO05D007158 9.8e-18 94.4 50 88.0
Nitab4.5_0006121g0010 Nicotiana tabacum HOM05D005968 ORTHO05D007158 1.8e-16 90.1 49 85.7
vmacro06082 Vaccinium macrocarpon HOM05D005968 ORTHO05D007158 3.9e-14 82.4 48 77.1
arahy.Tifrunner.gnm1.ann1.QXT71M Arachis hypogaea HOM05D005968 ORTHO05D007158 4.3e-13 79.0 40 82.5
Haze_19213 Corylus avellana HOM05D000344 ORTHO05D005296 6.2e-12 75.1 34 97.1
arahy.Tifrunner.gnm1.ann1.HGKJ8P Arachis hypogaea HOM05D005968 ORTHO05D007158 1.4e-11 73.9 40 80.0
arahy.Tifrunner.gnm1.ann1.VCSM30 Arachis hypogaea HOM05D005968 ORTHO05D007158 2.3e-11 73.2 40 77.5
arahy.Tifrunner.gnm1.ann1.4WLG0J Arachis hypogaea HOM05D005968 ORTHO05D007158 2.6e-10 69.7 37 75.7


User provided reference genes

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