Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.15G164100 Carya illinoinensis HOM05D007659 ORTHO05D009227 1.1e-50 203.0 104 100.0
Cfa019408 Carpinus fangiana HOM05D007659 ORTHO05D009227 4.2e-37 157.9 103 76.7
Haze_19137 Corylus avellana HOM05D007659 ORTHO05D009227 1.2e-36 156.4 103 75.7
QL02p094226 Quercus lobata HOM05D007659 ORTHO05D009227 3.9e-35 151.4 106 73.6
Haze_19128 Corylus avellana HOM05D007659 ORTHO05D009227 2.5e-34 148.7 102 71.6
Haze_19127 Corylus avellana HOM05D007659 ORTHO05D009227 3.7e-33 144.8 100 71.0
Haze_19124 Corylus avellana HOM05D007659 ORTHO05D009227 5.8e-31 137.5 89 74.2
Dinv41341 Davidia involucrata HOM05D007659 ORTHO05D009227 1.3e-30 136.3 102 69.6
RcHm_v2.0_Chr4g0405451 Rosa chinensis HOM05D007659 ORTHO05D009227 2.2e-30 135.6 105 66.7
Prupe.1G101900 Prunus persica HOM05D007659 ORTHO05D009227 3.8e-30 134.8 104 64.4
GSVIVG01023691001 Vitis vinifera HOM05D007659 ORTHO05D009227 3.8e-30 134.8 102 65.7
Haze_19129 Corylus avellana HOM05D007659 ORTHO05D009227 9.3e-29 130.2 92 68.5
Haze_19136 Corylus avellana HOM05D007659 ORTHO05D009227 1.6e-28 129.4 89 69.7
FvH4_4g09760 Fragaria vesca HOM05D007659 ORTHO05D009227 1.0e-27 126.7 104 62.5
FAN07G1615 Fragaria x ananassa HOM05D007659 ORTHO05D009227 1.8e-27 125.9 104 62.5
Eucgr.C02516 Eucalyptus grandis HOM05D007659 ORTHO05D009227 8.7e-27 123.6 102 59.8
Eucgr.L01549 Eucalyptus grandis HOM05D007659 ORTHO05D009227 1.1e-26 123.2 102 59.8
Rhsim01G0023600 Rhododendron simsii HOM05D007659 ORTHO05D009227 1.9e-26 122.5 104 66.3
Hma1.2p1_1084F.1_g255330 Hydrangea macrophylla HOM05D007659 ORTHO05D009227 3.3e-26 121.7 103 62.1
Thecc.09G154300 Theobroma cacao HOM05D007659 ORTHO05D009227 4.3e-26 121.3 102 60.8
FAN22G0789 Fragaria x ananassa HOM05D007659 ORTHO05D009227 2.1e-25 119.0 104 61.5
Cfa020779 Carpinus fangiana HOM05D001390 ORTHO05D001522 2.8e-25 118.6 74 78.4
MD12G1196500 Malus domestica HOM05D007659 ORTHO05D009227 2.8e-25 118.6 112 60.7
Ciclev10009916m.g Citrus clementina HOM05D007659 ORTHO05D009227 3.7e-25 118.2 110 60.0
Haze_27708 Corylus avellana HOM05D007659 ORTHO05D009227 4.8e-25 117.9 74 78.4
Duzib187G1272 Durio zibethinus HOM05D007659 ORTHO05D009227 9.0e-24 113.6 105 58.1
MELO3C010198.2 Cucumis melo HOM05D007659 ORTHO05D009227 2.0e-23 112.5 112 54.5
Aqoxy7G03300 Aquilegia oxysepala HOM05D007659 ORTHO05D009227 3.4e-23 111.7 106 58.5
TWI63G1302 Tripterygium wilfordii HOM05D007659 ORTHO05D009227 1.3e-22 109.8 101 59.4
CsaV3_1G029210 Cucumis sativus L. HOM05D007659 ORTHO05D009227 1.7e-22 109.4 110 56.4
ClCG06G012660 Citrullus lanatus HOM05D007659 ORTHO05D009227 2.2e-22 109.0 111 53.2
Manes.06G031900 Manihot esculenta HOM05D007659 ORTHO05D009227 2.9e-22 108.6 106 54.7
Sed0026034 Sechium edule HOM05D007659 ORTHO05D009227 2.9e-22 108.6 109 53.2
CANSAT11G2634 Cannabis sativa HOM05D007659 ORTHO05D009227 3.8e-22 108.2 102 54.9
Haze_19130 Corylus avellana HOM05D007659 ORTHO05D009227 8.4e-22 107.1 73 72.6
Nn8g40114 Nelumbo nucifera HOM05D007659 ORTHO05D009227 7.2e-21 104.0 107 59.8
Actinidia28561 Actinidia chinensis HOM05D007659 ORTHO05D009227 1.6e-20 102.8 106 57.5
EL10Ac4g09658 Beta vulgaris HOM05D007659 ORTHO05D009227 1.6e-20 102.8 103 48.5
BcaNung02735 Brassica carinata HOM05D007659 ORTHO05D009227 4.6e-20 101.3 85 60.0
Ah.06g188510 Amaranthus hybridus HOM05D000987 ORTHO05D000831 7.9e-20 100.5 103 51.5
Cc00_g30920 Coffea canephora HOM05D007659 ORTHO05D009227 1.0e-19 100.1 75 66.7
Cc02_g28880 Coffea canephora HOM05D007659 ORTHO05D009227 1.0e-19 100.1 75 66.7
THA.LOC104803555 Tarenaya hassleriana HOM05D007659 ORTHO05D009227 1.0e-19 100.1 106 53.8
C07p58250 Brassica napus HOM05D007659 ORTHO05D009227 1.3e-19 99.8 85 57.6
BolC7t46283H Brassica oleracea HOM05D007659 ORTHO05D009227 1.3e-19 99.8 85 57.6
Sabra06G0137200 Salix brachista HOM05D007659 ORTHO05D009227 1.8e-19 99.4 104 47.1
vmacro13049 Vaccinium macrocarpon HOM05D007659 ORTHO05D009227 6.7e-19 97.4 112 55.4
Hund07205 Selenicereus undatus HOM05D007659 ORTHO05D009227 8.7e-19 97.1 85 55.3
A03p60380 Brassica napus HOM05D007659 ORTHO05D009227 1.5e-18 96.3 85 56.5
BraA03t15078Z Brassica rapa HOM05D007659 ORTHO05D009227 1.5e-18 96.3 85 56.5
Thhalv10026581m.g Eutrema salsugineum HOM05D007659 ORTHO05D009227 1.5e-18 96.3 83 55.4
Carub.0007s0971 Capsella rubella HOM05D007659 ORTHO05D009227 1.9e-18 95.9 77 59.7
Gohir.A04G040700 Gossypium hirsutum HOM05D007659 ORTHO05D009227 1.9e-18 95.9 97 56.7
Gorai.009G368800 Gossypium raimondii HOM05D007659 ORTHO05D009227 1.9e-18 95.9 97 56.7
Gohir.D05G342500 Gossypium hirsutum HOM05D007659 ORTHO05D009227 2.5e-18 95.5 97 56.7
AT4G30845 Arabidopsis thaliana HOM05D007659 ORTHO05D009227 3.3e-18 95.1 77 61.0
Aa31LG2G19540 Aethionema arabicum HOM05D007659 ORTHO05D009227 7.4e-18 94.0 73 61.6
AL7G21270 Arabidopsis lyrata HOM05D007659 ORTHO05D009227 7.4e-18 94.0 77 61.0
PGR102G1560 Punica granatum HOM05D007659 ORTHO05D009227 7.4e-18 94.0 76 64.5
VMungo1215G2964 Vigna mungo HOM05D007659 ORTHO05D009227 7.4e-18 94.0 87 54.0
BcaNung01556 Brassica carinata HOM05D007659 ORTHO05D009227 9.7e-18 93.6 73 60.3
Medtr4g130250 Medicago truncatula HOM05D007659 ORTHO05D009227 1.3e-17 93.2 73 58.9
Phvul.003G153300 Phaseolus vulgaris HOM05D007659 ORTHO05D009227 1.3e-17 93.2 79 53.2
Ca_21156_v3 Cicer arietinum L. HOM05D007659 ORTHO05D009227 2.2e-17 92.4 103 51.5
arahy.Tifrunner.gnm1.ann1.FWLQ6H Arachis hypogaea HOM05D007659 ORTHO05D009227 4.8e-17 91.3 89 48.3
arahy.Tifrunner.gnm1.ann1.KUG4GU Arachis hypogaea HOM05D007659 ORTHO05D009227 4.8e-17 91.3 89 48.3
Lj4g0008058 Lotus japonicus HOM05D007659 ORTHO05D009227 4.8e-17 91.3 74 62.2
Glyma.17G071000 Glycine max HOM05D007659 ORTHO05D009227 8.2e-17 90.5 84 53.6
MSTRG.6163 Avicennia marina HOM05D007659 ORTHO05D009227 1.1e-16 90.1 107 49.5
Lalb_Chr12g0198851 Lupinus albus HOM05D007659 ORTHO05D009227 1.4e-16 89.7 103 45.6
unitig_736.g22510 Utricularia gibba HOM05D007659 ORTHO05D009227 1.4e-16 89.7 83 53.0
CARHR238720 Cardamine hirsuta HOM05D007659 ORTHO05D009227 1.8e-16 89.4 77 61.0
Peaxi162Scf00038g00725 Petunia axillaris HOM05D007659 ORTHO05D009227 3.1e-16 88.6 106 45.3
Psat4g010200 Pisum sativum HOM05D007659 ORTHO05D009227 4.1e-16 88.2 101 48.5
HanXRQChr03g0066011 Helianthus annuus HOM05D007659 ORTHO05D009227 5.3e-16 87.8 107 48.6
PGSC0003DMG400011214 Solanum tuberosum HOM05D007659 ORTHO05D009227 1.2e-15 86.7 111 48.6
Migut.J01394 Erythranthe guttata HOM05D007659 ORTHO05D009227 5.9e-15 84.3 76 56.6
Sc06g0005340 Simmondsia chinensis HOM05D007659 ORTHO05D009227 5.9e-15 84.3 95 48.4
CDE04G0159 Ceratophyllum demersum HOM05D007659 ORTHO05D009227 7.7e-15 84.0 91 47.3
Lsat_1_v5_gn_7_50920 Lactuca sativa HOM05D007659 ORTHO05D009227 1.0e-14 83.6 112 45.5
Solyc07g006040.3 Solanum lycopersicum HOM05D007659 ORTHO05D009227 1.3e-14 83.2 110 43.6
SalBow6G0978 Salvia bowleyana HOM05D007659 ORTHO05D009227 1.7e-14 82.8 103 47.6
TPR.G24875 Trifolium pratense HOM05D007659 ORTHO05D009227 6.5e-14 80.9 58 63.8
PSO782G2453 Papaver somniferum HOM05D007659 ORTHO05D009227 2.5e-13 79.0 52 71.2
Potri.006G180200 Populus trichocarpa HOM05D007659 ORTHO05D009227 2.5e-13 79.0 153 33.3
HPP92_006698 Vanilla planifolia HOM05D007659 ORTHO05D009227 9.4e-13 77.0 84 46.4
PSO063G0802 Papaver somniferum HOM05D007659 ORTHO05D009227 1.6e-12 76.3 117 41.0
ATR0111G019 Amborella trichopoda HOM05D007659 ORTHO05D009227 3.6e-12 75.1 49 65.3
Nitab4.5_0016001g0010 Nicotiana tabacum HOM05D007659 ORTHO05D009227 7.9e-12 73.9 46 69.6
Os03g0210900 Oryza sativa ssp. japonica HOM05D007659 ORTHO05D009227 1.4e-11 73.2 66 54.5
Zm00001eb400430 Zea mays HOM05D007659 ORTHO05D009227 3.0e-11 72.0 50 62.0
MD04G1182900 Malus domestica HOM05D007659 ORTHO05D009227 6.7e-11 70.9 48 66.7
CSS0019882 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 6.3e-09 64.3 76 52.6
CSS0048580 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 6.3e-09 64.3 76 51.3
CSS0036875 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 1.8e-08 62.8 76 51.3
CSS0009256 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 4.1e-08 61.6 76 50.0
CSS0021661 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 5.3e-08 61.2 76 48.7
Pp3c17_8590 Physcomitrium patens HOM05D007659 ORTHO05D009227 6.9e-08 60.8 44 56.8
CBR_g10976 Chara braunii HOM05D007659 ORTHO05D009227 1.2e-07 60.1 40 62.5
AagrBONN_evm.TU.Sc2ySwM_228.2308 Anthoceros agrestis HOM05D007659 ORTHO05D009227 2.0e-07 59.3 79 43.0
CSS0041034 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 2.0e-07 59.3 78 44.9
CSS0028860 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 2.6e-07 58.9 76 50.0
CSS0049883 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 3.4e-07 58.5 76 47.4
CSS0031893 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 1.0e-06 57.0 76 50.0
Mapoly0004s0134 Marchantia polymorpha HOM05D007659 ORTHO05D009227 2.9e-06 55.5 53 45.3


User provided reference genes

Program Settings