Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.15G162200 Carya illinoinensis HOM05D006430 ORTHO05D007585 2.4e-93 345.5 175 100.0
CiPaw.03G130500 Carya illinoinensis HOM05D006430 ORTHO05D007585 5.2e-40 168.3 89 92.1
Duzib187G0475 Durio zibethinus HOM05D006430 ORTHO05D007585 9.8e-39 164.1 94 83.0
CiPaw.09G145300 Carya illinoinensis HOM05D006430 ORTHO05D007585 2.2e-38 162.9 92 84.8
Atru.chr4.619 Acer truncatum HOM05D006430 ORTHO05D007585 6.4e-38 161.4 94 81.9
Ciclev10026172m.g Citrus clementina HOM05D006430 ORTHO05D007585 1.1e-37 160.6 94 81.9
MELO3C008023.2 Cucumis melo HOM05D006430 ORTHO05D007585 1.1e-37 160.6 94 81.9
ECA238G4454 Erigeron canadensis HOM05D006430 ORTHO05D007585 1.1e-37 160.6 94 80.9
Gohir.D08G046300 Gossypium hirsutum HOM05D006430 ORTHO05D007585 1.1e-37 160.6 94 80.9
Gorai.004G045500 Gossypium raimondii HOM05D006430 ORTHO05D007585 1.1e-37 160.6 94 80.9
Rhsim08G0004200 Rhododendron simsii HOM05D006430 ORTHO05D007585 1.1e-37 160.6 94 80.9
COL.COLO4_22379 Corchorus olitorius HOM05D006430 ORTHO05D007585 1.4e-37 160.2 121 65.3
PGR102G2076 Punica granatum HOM05D006430 ORTHO05D007585 1.4e-37 160.2 94 80.9
VMungo0251G0154 Vigna mungo HOM05D006430 ORTHO05D007585 1.4e-37 160.2 121 67.8
Cpa.g.sc72.36 Carica papaya HOM05D006430 ORTHO05D007585 1.8e-37 159.8 94 79.8
Migut.L00052 Erythranthe guttata HOM05D006430 ORTHO05D007585 1.8e-37 159.8 94 78.7
Eucgr.H04894 Eucalyptus grandis HOM05D006430 ORTHO05D007585 1.8e-37 159.8 94 80.9
Hma1.2p1_0253F.1_g102940 Hydrangea macrophylla HOM05D006430 ORTHO05D007585 1.8e-37 159.8 94 79.8
Phvul.002G268300 Phaseolus vulgaris HOM05D006430 ORTHO05D007585 1.8e-37 159.8 121 66.9
Thecc.01G118500 Theobroma cacao HOM05D006430 ORTHO05D007585 1.8e-37 159.8 93 81.7
unitig_37.g12838 Utricularia gibba HOM05D006430 ORTHO05D007585 1.8e-37 159.8 94 77.7
HanXRQChr07g0201191 Helianthus annuus HOM05D006430 ORTHO05D007585 2.4e-37 159.5 94 79.8
Lalb_Chr12g0203371 Lupinus albus HOM05D006430 ORTHO05D007585 2.4e-37 159.5 121 67.8
Actinidia09815 Actinidia chinensis HOM05D006430 ORTHO05D007585 3.2e-37 159.1 94 80.9
Glyma.08G145700 Glycine max HOM05D006430 ORTHO05D007585 3.2e-37 159.1 121 67.8
Lsat_1_v5_gn_2_116520 Lactuca sativa HOM05D006430 ORTHO05D007585 3.2e-37 159.1 94 79.8
Prupe.6G161500 Prunus persica HOM05D006430 ORTHO05D007585 4.1e-37 158.7 89 84.3
Solyc11g005550.2 Solanum lycopersicum HOM05D006430 ORTHO05D007585 4.1e-37 158.7 94 78.7
Sopen11g001520 Solanum pennellii HOM05D006430 ORTHO05D007585 4.1e-37 158.7 94 78.7
CANSAT01G2305 Cannabis sativa HOM05D006430 ORTHO05D007585 5.4e-37 158.3 94 79.8
Cfa002800 Carpinus fangiana HOM05D006430 ORTHO05D007585 5.4e-37 158.3 94 80.9
Haze_25101 Corylus avellana HOM05D006430 ORTHO05D007585 5.4e-37 158.3 94 80.9
Gohir.A08G035600 Gossypium hirsutum HOM05D006430 ORTHO05D007585 5.4e-37 158.3 94 79.8
RcHm_v2.0_Chr2g0119791 Rosa chinensis HOM05D006430 ORTHO05D007585 5.4e-37 158.3 94 79.8
RcHm_v2.0_Chr2g0119831 Rosa chinensis HOM05D006430 ORTHO05D007585 5.4e-37 158.3 94 79.8
RcHm_v2.0_Chr6g0259141 Rosa chinensis HOM05D006430 ORTHO05D007585 5.4e-37 158.3 94 79.8
vmacro18651 Vaccinium macrocarpon HOM05D006430 ORTHO05D007585 5.4e-37 158.3 94 78.7
MSTRG.3821 Avicennia marina HOM05D006430 ORTHO05D007585 7.0e-37 157.9 94 77.7
Medtr8g092620 Medicago truncatula HOM05D006430 ORTHO05D007585 7.0e-37 157.9 121 66.9
Peaxi162Scf00025g02621 Petunia axillaris HOM05D006430 ORTHO05D007585 7.0e-37 157.9 94 76.6
SGA_v2.0_scaffold47G17683 Striga asiatica HOM05D006430 ORTHO05D007585 7.0e-37 157.9 94 78.7
CsaV3_6G042010 Cucumis sativus L. HOM05D006430 ORTHO05D007585 9.2e-37 157.5 94 80.9
QL08p047156 Quercus lobata HOM05D006430 ORTHO05D007585 9.2e-37 157.5 94 78.7
Dinv02715 Davidia involucrata HOM05D006430 ORTHO05D007585 1.2e-36 157.1 94 78.7
FAN19G1422 Fragaria x ananassa HOM05D006430 ORTHO05D007585 1.2e-36 157.1 94 78.7
Glyma.05G187400 Glycine max HOM05D006430 ORTHO05D007585 1.2e-36 157.1 121 66.9
Nitab4.5_0001582g0080 Nicotiana tabacum HOM05D006430 ORTHO05D007585 1.2e-36 157.1 94 77.7
Sed0026374 Sechium edule HOM05D006430 ORTHO05D007585 1.2e-36 157.1 94 80.9
THA.LOC104799376 Tarenaya hassleriana HOM05D006430 ORTHO05D007585 1.2e-36 157.1 94 79.8
GSVIVG01016788001 Vitis vinifera HOM05D006430 ORTHO05D007585 1.2e-36 157.1 94 80.9
FvH4_1g23870 Fragaria vesca HOM05D006430 ORTHO05D007585 1.6e-36 156.8 94 77.7
Manes.12G148000 Manihot esculenta HOM05D006430 ORTHO05D007585 1.6e-36 156.8 94 79.8
Potri.001G306500 Populus trichocarpa HOM05D006430 ORTHO05D007585 1.6e-36 156.8 94 79.8
Sabra16G0192700 Salix brachista HOM05D006430 ORTHO05D007585 1.6e-36 156.8 94 80.9
TWI79G0409 Tripterygium wilfordii HOM05D006430 ORTHO05D007585 1.6e-36 156.8 94 77.7
DCAR_011471 Daucus carota HOM05D006430 ORTHO05D007585 2.0e-36 156.4 94 77.7
TPR.G2201 Trifolium pratense HOM05D006430 ORTHO05D007585 2.0e-36 156.4 121 66.1
CDE08G0124 Ceratophyllum demersum HOM05D006430 ORTHO05D007585 2.7e-36 156.0 94 78.7
Ca_17667_v3 Cicer arietinum L. HOM05D006430 ORTHO05D007585 2.7e-36 156.0 121 65.3
Nitab4.5_0002138g0060 Nicotiana tabacum HOM05D006430 ORTHO05D007585 2.7e-36 156.0 94 76.6
PGSC0003DMG400003975 Solanum tuberosum HOM05D006430 ORTHO05D007585 2.7e-36 156.0 94 76.6
PSO675G2196 Papaver somniferum HOM05D006430 ORTHO05D007585 3.5e-36 155.6 94 75.5
FAN26G1413 Fragaria x ananassa HOM05D006430 ORTHO05D007585 4.6e-36 155.2 94 76.6
CSS0010804 Camellia sinensis var. sinensis HOM05D006430 ORTHO05D007585 7.8e-36 154.5 94 76.6
Cc07_g16870 Coffea canephora HOM05D006430 ORTHO05D007585 7.8e-36 154.5 93 78.5
FAN05G3385 Fragaria x ananassa HOM05D006430 ORTHO05D007585 7.8e-36 154.5 94 77.7
Oeu015836.1 Olea europaea HOM05D006430 ORTHO05D007585 7.8e-36 154.5 94 77.7
Sp2g27800 Schrenkiella parvula HOM05D006430 ORTHO05D007585 7.8e-36 154.5 89 83.1
Lj4g0013268 Lotus japonicus HOM05D006430 ORTHO05D007585 1.0e-35 154.1 121 65.3
Psat7g048920 Pisum sativum HOM05D006430 ORTHO05D007585 1.3e-35 153.7 121 65.3
TAR628G1086 Trochodendron aralioides HOM05D006430 ORTHO05D007585 1.3e-35 153.7 94 77.7
AL8G42180 Arabidopsis lyrata HOM05D006430 ORTHO05D007585 1.7e-35 153.3 89 82.0
AT5G64730 Arabidopsis thaliana HOM05D006430 ORTHO05D007585 1.7e-35 153.3 89 82.0
Carub.0008s2554 Capsella rubella HOM05D006430 ORTHO05D007585 1.7e-35 153.3 89 82.0
Thhalv10004678m.g Eutrema salsugineum HOM05D006430 ORTHO05D007585 1.7e-35 153.3 89 82.0
CARHR278720 Cardamine hirsuta HOM05D006430 ORTHO05D007585 2.3e-35 152.9 89 80.9
AUR62003640 Chenopodium quinoa HOM05D006430 ORTHO05D007585 2.3e-35 152.9 93 78.5
BcaB02g09817 Brassica carinata HOM05D006430 ORTHO05D007585 3.9e-35 152.1 89 80.9
Ah.03g140160 Amaranthus hybridus HOM05D006430 ORTHO05D007585 5.0e-35 151.8 93 76.3
Aqoxy6G00390 Aquilegia oxysepala HOM05D006430 ORTHO05D007585 8.6e-35 151.0 94 73.4
BcaC01g02704 Brassica carinata HOM05D006430 ORTHO05D007585 1.1e-34 150.6 89 79.8
A06p31510 Brassica napus HOM05D006430 ORTHO05D007585 1.1e-34 150.6 89 79.8
C03p61450 Brassica napus HOM05D006430 ORTHO05D007585 1.1e-34 150.6 89 79.8
BolC3t18404H Brassica oleracea HOM05D006430 ORTHO05D007585 1.1e-34 150.6 89 79.8
BraA06t26090Z Brassica rapa HOM05D006430 ORTHO05D007585 1.1e-34 150.6 89 79.8
EL10Ac6g15234 Beta vulgaris HOM05D006430 ORTHO05D007585 1.5e-34 150.2 89 79.8
AUR62017950 Chenopodium quinoa HOM05D006430 ORTHO05D007585 1.5e-34 150.2 93 77.4
ATR0311G002 Amborella trichopoda HOM05D006430 ORTHO05D007585 3.3e-34 149.1 94 73.4
MBI09_g02046_MAGBIO Magnolia biondii HOM05D006430 ORTHO05D007585 3.3e-34 149.1 94 74.5
Sc03g0004640 Simmondsia chinensis HOM05D006430 ORTHO05D007585 4.3e-34 148.7 94 74.5
Manes.12G148300 Manihot esculenta HOM05D006430 ORTHO05D007585 9.5e-34 147.5 94 75.5
arahy.Tifrunner.gnm1.ann1.NYPU2B Arachis hypogaea HOM05D006430 ORTHO05D007585 1.2e-33 147.1 140 59.3
HPP92_016153 Vanilla planifolia HOM05D006430 ORTHO05D007585 6.2e-33 144.8 94 72.3
arahy.Tifrunner.gnm1.ann1.DL1CJS Arachis hypogaea HOM05D006430 ORTHO05D007585 2.0e-31 139.8 135 58.5
Aa31LG1G17180 Aethionema arabicum HOM05D006430 ORTHO05D007585 7.5e-31 137.9 123 61.0
Mapoly0011s0172 Marchantia polymorpha HOM05D006430 ORTHO05D007585 2.2e-30 136.3 111 62.2
FAN28G2007 Fragaria x ananassa HOM05D006430 ORTHO05D007585 1.4e-29 133.7 125 56.0
Hund19623 Selenicereus undatus HOM05D006430 ORTHO05D007585 6.0e-28 128.3 149 48.3
Pp3c23_12950 Physcomitrium patens HOM05D006430 ORTHO05D007585 5.0e-27 125.2 116 57.8
arahy.Tifrunner.gnm1.ann1.H2AKZ1 Arachis hypogaea HOM05D006430 ORTHO05D007585 2.8e-25 119.4 121 56.2
Zm00001eb181820 Zea mays HOM05D006430 ORTHO05D007585 1.4e-24 117.1 111 54.1
CBR_g30933 Chara braunii HOM05D006430 ORTHO05D007585 1.5e-23 113.6 94 55.3
Lsat_1_v5_gn_8_143080 Lactuca sativa HOM05D006430 ORTHO05D007585 2.7e-20 102.8 99 58.6
Os02g0543400 Oryza sativa ssp. japonica HOM05D006430 ORTHO05D007585 7.8e-20 101.3 83 59.0
AagrBONN_evm.TU.Sc2ySwM_228.1007 Anthoceros agrestis HOM05D006430 ORTHO05D007585 1.3e-19 100.5 70 70.0
PRCOL_00003041 Prasinoderma coloniale HOM05D006430 ORTHO05D007585 2.8e-17 92.8 84 51.2
SMO361G0710 Selaginella moellendorffii HOM05D006430 ORTHO05D007585 2.3e-16 89.7 116 41.4
Lj2C583G2 Lonicera japonica HOM05D000121 ORTHO05D000102 9.2e-13 77.8 94 48.9
MCO04G315 Micromonas commoda HOM05D006430 ORTHO05D007585 2.1e-12 76.6 67 50.7
Lj2A575G41 Lonicera japonica HOM05D006430 ORTHO05D007585 2.7e-12 76.3 84 53.6
MD15G1340800 Malus domestica HOM05D006430 ORTHO05D007585 7.8e-12 74.7 65 61.5
CDE02G1640 Ceratophyllum demersum HOM05D005494 ORTHO05D006689 6.6e-11 71.6 85 45.9
AL4G16230 Arabidopsis lyrata HOM05D006430 ORTHO05D007585 4.3e-10 68.9 40 80.0
Lsat_1_v5_gn_4_159620 Lactuca sativa HOM05D000911 ORTHO05D007585 4.0e-08 62.4 57 54.4
Lsat_1_v5_gn_2_95121 Lactuca sativa HOM05D000015 ORTHO05D007585 1.2e-07 60.8 72 48.6
Lsat_1_v5_gn_7_93000 Lactuca sativa HOM05D006430 ORTHO05D007585 4.4e-07 58.9 46 63.0
Lsat_1_v5_gn_9_87941 Lactuca sativa HOM05D006430 ORTHO05D007585 8.4e-06 54.7 50 56.0


User provided reference genes

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