Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.15G143800 Carya illinoinensis HOM05D006919 ORTHO05D008705 1.2e-175 619.8 318 100.0
QL10p029823 Quercus lobata HOM05D006919 ORTHO05D008705 1.8e-152 542.7 317 86.4
Prupe.5G234100 Prunus persica HOM05D006919 ORTHO05D008705 5.7e-146 521.2 318 81.8
CANSAT80G0223 Cannabis sativa HOM05D006919 ORTHO05D008705 4.9e-145 518.1 318 80.5
Gohir.A07G060000 Gossypium hirsutum HOM05D006919 ORTHO05D008705 6.3e-145 517.7 315 81.0
Gorai.001G068200 Gossypium raimondii HOM05D006919 ORTHO05D008705 1.1e-144 516.9 315 81.0
Thecc.03G055400 Theobroma cacao HOM05D006919 ORTHO05D008705 1.8e-144 516.2 314 80.9
Atru.chr9.1714 Acer truncatum HOM05D006919 ORTHO05D008705 5.4e-144 514.6 317 79.8
Gohir.D07G064700 Gossypium hirsutum HOM05D006919 ORTHO05D008705 5.4e-144 514.6 315 80.6
Potri.015G037600 Populus trichocarpa HOM05D006919 ORTHO05D008705 1.6e-143 513.1 316 79.7
Duzib205G1348 Durio zibethinus HOM05D006919 ORTHO05D008705 2.7e-143 512.3 314 79.3
MD06G1227700 Malus domestica HOM05D006919 ORTHO05D008705 3.5e-143 511.9 318 78.9
Atru.chr9.1680 Acer truncatum HOM05D006919 ORTHO05D008705 3.8e-142 508.4 324 78.1
TAR629G0573 Trochodendron aralioides HOM05D006919 ORTHO05D008705 3.8e-142 508.4 318 79.2
Phvul.004G150300 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 8.6e-142 507.3 318 80.8
RcHm_v2.0_Chr7g0178261 Rosa chinensis HOM05D006919 ORTHO05D008705 8.6e-142 507.3 318 78.6
Phvul.004G149400 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 1.1e-141 506.9 318 80.8
Dinv08205 Davidia involucrata HOM05D006919 ORTHO05D008705 1.5e-141 506.5 318 79.2
PGR083G2730 Punica granatum HOM05D006919 ORTHO05D008705 3.3e-141 505.4 317 77.9
Actinidia18895 Actinidia chinensis HOM05D006919 ORTHO05D008705 2.1e-140 502.7 318 77.7
TWI81G0447 Tripterygium wilfordii HOM05D006919 ORTHO05D008705 8.0e-140 500.7 318 78.0
Glyma.07G102800 Glycine max HOM05D006919 ORTHO05D008705 1.0e-139 500.4 321 79.4
FvH4_5g17430 Fragaria vesca HOM05D006919 ORTHO05D008705 2.3e-139 499.2 319 77.7
COL.COLO4_04912 Corchorus olitorius HOM05D006919 ORTHO05D008705 5.2e-139 498.0 316 77.5
Lalb_Chr24g0398171 Lupinus albus HOM05D006919 ORTHO05D008705 8.9e-139 497.3 318 77.7
CSS0007871 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 1.5e-138 496.5 320 76.9
Psat1g030800 Pisum sativum HOM05D006919 ORTHO05D008705 4.4e-138 495.0 316 78.5
arahy.Tifrunner.gnm1.ann1.CTKR59 Arachis hypogaea HOM05D006919 ORTHO05D008705 5.8e-138 494.6 318 77.4
TPR.G8644 Trifolium pratense HOM05D006919 ORTHO05D008705 3.7e-137 491.9 316 78.5
THA.LOC104820349 Tarenaya hassleriana HOM05D006919 ORTHO05D008705 3.2e-136 488.8 317 75.1
Medtr6g069620 Medicago truncatula HOM05D006919 ORTHO05D008705 2.0e-135 486.1 316 77.5
GSVIVG01008449001 Vitis vinifera HOM05D006919 ORTHO05D008705 3.5e-135 485.3 318 76.1
FAN13G2797 Fragaria x ananassa HOM05D006919 ORTHO05D008705 2.3e-134 482.6 306 77.1
AL1G55190 Arabidopsis lyrata HOM05D006919 ORTHO05D008705 1.1e-133 480.3 316 72.8
CsaV3_1G007200 Cucumis sativus L. HOM05D006919 ORTHO05D008705 1.9e-133 479.6 315 76.5
FAN08G0969 Fragaria x ananassa HOM05D006919 ORTHO05D008705 1.9e-133 479.6 306 76.8
C06p03070 Brassica napus HOM05D006919 ORTHO05D008705 3.3e-133 478.8 316 72.8
BolC6t35427H Brassica oleracea HOM05D006919 ORTHO05D008705 3.3e-133 478.8 316 72.8
Thhalv10012210m.g Eutrema salsugineum HOM05D006919 ORTHO05D008705 3.3e-133 478.8 316 72.2
AT1G48550 Arabidopsis thaliana HOM05D006919 ORTHO05D008705 4.3e-133 478.4 316 72.2
Cpa.g.sc3.392 Carica papaya HOM05D006919 ORTHO05D008705 4.3e-133 478.4 338 71.6
BcaB07g33748 Brassica carinata HOM05D006919 ORTHO05D008705 5.6e-133 478.0 316 72.8
Nn4g24311 Nelumbo nucifera HOM05D006919 ORTHO05D008705 1.6e-132 476.5 318 73.0
A06p04410 Brassica napus HOM05D006919 ORTHO05D008705 2.1e-132 476.1 316 72.5
Carub.0001s3766 Capsella rubella HOM05D006919 ORTHO05D008705 3.6e-132 475.3 316 71.8
AUR62020416 Chenopodium quinoa HOM05D006919 ORTHO05D008705 4.7e-132 474.9 316 73.4
BraA06t23646Z Brassica rapa HOM05D006919 ORTHO05D008705 1.1e-131 473.8 318 72.6
FAN04G0116 Fragaria x ananassa HOM05D006919 ORTHO05D008705 1.1e-131 473.8 307 76.2
Sp1g35490 Schrenkiella parvula HOM05D006919 ORTHO05D008705 4.0e-131 471.9 316 71.2
BcaC08g43045 Brassica carinata HOM05D006919 ORTHO05D008705 6.8e-131 471.1 322 71.1
Lj2g0027212 Lotus japonicus HOM05D006919 ORTHO05D008705 3.4e-130 468.8 304 77.3
arahy.Tifrunner.gnm1.ann1.95HZXM Arachis hypogaea HOM05D006919 ORTHO05D008705 9.8e-130 467.2 361 67.6
Sed0003421 Sechium edule HOM05D006919 ORTHO05D008705 6.4e-129 464.5 304 76.0
Aa31LG10G5250 Aethionema arabicum HOM05D006919 ORTHO05D008705 1.4e-128 463.4 317 70.7
MSTRG.9306 Avicennia marina HOM05D006919 ORTHO05D008705 1.9e-128 463.0 316 73.7
Aqoxy3G04092 Aquilegia oxysepala HOM05D006919 ORTHO05D008705 2.4e-128 462.6 318 73.0
VMungo0464G0753 Vigna mungo HOM05D006919 ORTHO05D008705 2.4e-128 462.6 318 75.5
Sopen03g037620 Solanum pennellii HOM05D006919 ORTHO05D008705 1.0e-126 457.2 318 71.4
Migut.D01529 Erythranthe guttata HOM05D006919 ORTHO05D008705 3.0e-126 455.7 317 70.7
QL10p030230 Quercus lobata HOM05D006919 ORTHO05D008705 3.9e-126 455.3 298 79.2
AUR62015799 Chenopodium quinoa HOM05D006919 ORTHO05D008705 1.9e-125 453.0 297 74.7
Migut.D01538 Erythranthe guttata HOM05D006919 ORTHO05D008705 1.9e-125 453.0 317 70.7
PGSC0003DMG402005674 Solanum tuberosum HOM05D006919 ORTHO05D008705 4.3e-125 451.8 318 70.8
Hund01978 Selenicereus undatus HOM05D006919 ORTHO05D008705 7.3e-125 451.1 309 71.2
CAN.G843.52 Capsicum annuum HOM05D006919 ORTHO05D008705 9.5e-125 450.7 318 71.1
Ciclev10010588m.g Citrus clementina HOM05D006919 ORTHO05D008705 1.2e-124 450.3 312 72.8
ECA233G0189 Erigeron canadensis HOM05D006919 ORTHO05D008705 1.1e-123 447.2 314 70.1
Cc04_g06200 Coffea canephora HOM05D006919 ORTHO05D008705 3.1e-123 445.7 325 68.0
HanXRQChr05g0142681 Helianthus annuus HOM05D006919 ORTHO05D008705 8.9e-123 444.1 318 67.9
CSS0013537 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 3.4e-122 442.2 320 71.2
Oeu026273.1 Olea europaea HOM05D006919 ORTHO05D008705 5.8e-122 441.4 303 71.6
PSO063G3076 Papaver somniferum HOM05D006919 ORTHO05D008705 5.8e-122 441.4 318 70.1
Solyc03g118660.3 Solanum lycopersicum HOM05D006919 ORTHO05D008705 7.5e-122 441.0 304 70.7
Manes.06G005400 Manihot esculenta HOM05D006919 ORTHO05D008705 1.7e-121 439.9 269 80.3
FAN18G1663 Fragaria x ananassa HOM05D006919 ORTHO05D008705 8.3e-121 437.6 306 72.2
arahy.Tifrunner.gnm1.ann1.2R737Y Arachis hypogaea HOM05D006919 ORTHO05D008705 2.7e-119 432.6 318 70.8
Lsat_1_v5_gn_8_720 Lactuca sativa HOM05D006919 ORTHO05D008705 1.5e-117 426.8 303 68.3
ATR1100G039 Amborella trichopoda HOM05D006919 ORTHO05D008705 4.7e-116 421.8 317 65.0
PSO754G0044 Papaver somniferum HOM05D006919 ORTHO05D008705 4.0e-115 418.7 318 66.4
EL10Ac4g07782 Beta vulgaris HOM05D006919 ORTHO05D008705 1.5e-114 416.8 318 68.2
arahy.Tifrunner.gnm1.ann1.54PB3V Arachis hypogaea HOM05D006919 ORTHO05D008705 7.6e-114 414.5 339 66.1
Nitab4.5_0013135g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 4.0e-107 392.1 270 72.2
ClCG04G010590 Citrullus lanatus HOM05D006919 ORTHO05D008705 6.9e-107 391.3 315 66.3
MELO3C002137.2 Cucumis melo HOM05D006919 ORTHO05D008705 2.3e-102 376.3 255 75.7
Ca_25336_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 9.6e-101 370.9 270 71.1
Ca_29640_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 9.6e-101 370.9 270 71.1
HPP92_023812 Vanilla planifolia HOM05D006919 ORTHO05D008705 9.0e-99 364.4 316 62.0
Peaxi162Scf00314g00331 Petunia axillaris HOM05D006919 ORTHO05D008705 3.0e-94 349.4 247 69.6
Eucgr.B00878 Eucalyptus grandis HOM05D006919 ORTHO05D008705 1.5e-90 337.0 230 70.9
Mapoly0012s0164 Marchantia polymorpha HOM05D006919 ORTHO05D008705 7.6e-90 334.7 322 50.9
AagrBONN_evm.TU.Sc2ySwM_344.2286 Anthoceros agrestis HOM05D006919 ORTHO05D008705 1.0e-86 324.3 315 48.9
vmacro16410 Vaccinium macrocarpon HOM05D006919 ORTHO05D008705 1.8e-86 323.6 256 65.6
CDE08G0345 Ceratophyllum demersum HOM05D006919 ORTHO05D008705 6.2e-84 315.1 317 53.9
Haze_18872 Corylus avellana HOM05D006919 ORTHO05D008705 2.2e-81 306.6 332 55.1
Nitab4.5_0012026g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 1.9e-80 303.5 213 70.0
Pp3c2_29770 Physcomitrium patens HOM05D006919 ORTHO05D008705 2.7e-79 299.7 315 47.6
CARHR038160 Cardamine hirsuta HOM05D006919 ORTHO05D008705 3.5e-79 299.3 194 73.7
Pp3c1_6570 Physcomitrium patens HOM05D006919 ORTHO05D008705 4.6e-79 298.9 315 48.3
Glyma.U031615 Glycine max HOM05D006919 ORTHO05D008705 5.1e-78 295.4 181 81.2
MBI09_g15241_MAGBIO Magnolia biondii HOM05D006919 ORTHO05D008705 1.1e-77 294.3 216 67.1
Eucgr.B00996 Eucalyptus grandis HOM05D006919 ORTHO05D008705 5.1e-70 268.9 230 59.1
AagrBONN_evm.TU.Sc2ySwM_228.5103 Anthoceros agrestis HOM05D006919 ORTHO05D008705 2.4e-67 260.0 305 42.3
SMO143G0218 Selaginella moellendorffii HOM05D006919 ORTHO05D008705 2.4e-67 260.0 268 52.6
Cfa019651 Carpinus fangiana HOM05D006919 ORTHO05D008705 5.5e-64 248.8 145 84.1
CBR_g44935 Chara braunii HOM05D006919 ORTHO05D008705 2.2e-57 226.9 339 40.4
RcHm_v2.0_Chr5g0035741 Rosa chinensis HOM05D006919 ORTHO05D008705 2.5e-48 196.8 127 74.0
RcHm_v2.0_Chr7g0224581 Rosa chinensis HOM05D006919 ORTHO05D008705 8.0e-47 191.8 128 72.7
Rhsim12G0138200 Rhododendron simsii HOM05D006919 ORTHO05D008705 5.7e-45 185.7 228 46.5
Lj9A419G30 Lonicera japonica HOM05D006919 ORTHO05D008705 3.6e-39 166.4 248 41.1
arahy.Tifrunner.gnm1.ann1.248BIT Arachis hypogaea HOM05D006919 ORTHO05D008705 7.2e-32 142.1 103 70.9
RcHm_v2.0_Chr7g0212051 Rosa chinensis HOM05D006919 ORTHO05D008705 2.7e-26 123.6 88 70.5
SEGI_02358 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 4.3e-24 116.3 93 60.2
Lj9C419T19 Lonicera japonica HOM05D006919 ORTHO05D008705 2.1e-23 114.0 70 80.0
CBR_g74660 Chara braunii HOM05D006919 ORTHO05D008705 1.8e-22 110.9 210 38.1
SEGI_39350 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 3.2e-11 73.6 72 48.6
ECA233G3510 Erigeron canadensis HOM05D015936 ORTHO05D022524 6.2e-07 59.3 44 59.1


User provided reference genes

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