Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.15G130200 Carya illinoinensis HOM05D009850 ORTHO05D011981 2.3e-61 239.2 170 100.0
CiPaw.01G061900 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.8e-58 229.6 177 92.1
CiPaw.16G049900 Carya illinoinensis HOM05D009850 ORTHO05D011981 2.7e-57 225.7 177 93.8
CiPaw.01G105900 Carya illinoinensis HOM05D009850 ORTHO05D011981 2.8e-54 215.7 170 86.5
CiPaw.01G013100 Carya illinoinensis HOM05D009850 ORTHO05D011981 4.4e-44 181.8 188 79.3
CiPaw.01G053000 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.9e-31 139.8 172 69.8
CiPaw.09G066300 Carya illinoinensis HOM05D009850 ORTHO05D011981 2.1e-30 136.3 172 68.6
CiPaw.03G153800 Carya illinoinensis HOM05D009850 ORTHO05D011981 4.7e-30 135.2 181 70.2
CiPaw.11G105700 Carya illinoinensis HOM05D009850 ORTHO05D011981 2.2e-27 126.3 97 67.0
CiPaw.11G026600 Carya illinoinensis HOM05D009850 ORTHO05D011981 7.1e-26 121.3 93 67.7
CiPaw.01G280200 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.2e-25 120.6 91 71.4
CiPaw.13G125800 Carya illinoinensis HOM05D009850 ORTHO05D011981 2.1e-25 119.8 96 69.8
CiPaw.14G106100 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.3e-24 117.1 90 65.6
CiPaw.01G217800 Carya illinoinensis HOM05D009850 ORTHO05D011981 2.3e-24 116.3 92 68.5
CiPaw.13G085700 Carya illinoinensis HOM05D009850 ORTHO05D011981 3.0e-24 115.9 92 67.4
CiPaw.07G027100 Carya illinoinensis HOM05D009850 ORTHO05D011981 8.6e-24 114.4 89 65.2
CiPaw.04G185500 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.9e-23 113.2 87 67.8
CiPaw.05G086500 Carya illinoinensis HOM05D009850 ORTHO05D011981 2.2e-19 99.8 78 65.4
CiPaw.03G153700 Carya illinoinensis HOM05D009850 ORTHO05D011981 3.8e-19 99.0 66 71.2
CiPaw.05G103700 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.4e-13 80.5 88 47.7
CiPaw.15G141100 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.4e-13 80.5 61 62.3
CiPaw.09G001000 Carya illinoinensis HOM05D009850 ORTHO05D011981 5.3e-13 78.6 82 46.3
CiPaw.11G103900 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.2e-12 77.4 86 46.5
TPR.G31023 Trifolium pratense HOM05D019053 ORTHO05D020883 5.1e-08 62.0 58 44.8
Carub.0029s0002 Capsella rubella HOM05D010286 ORTHO05D011981 1.5e-07 60.5 71 38.0
Carub.0029s0004 Capsella rubella HOM05D010286 ORTHO05D011981 1.9e-07 60.1 45 51.1
Peaxi162Scf00723g00110 Petunia axillaris HOM05D001383 ORTHO05D000309 1.9e-07 60.1 65 47.7
Peaxi162Scf00187g01114 Petunia axillaris HOM05D001383 ORTHO05D000309 2.1e-06 56.6 67 44.8
CiPaw.05G170400 Carya illinoinensis HOM05D000059 ORTHO05D000128 3.7e-06 55.8 63 44.4
Lj7P745T14 Lonicera japonica HOM05D008126 ORTHO05D000309 3.7e-06 55.8 51 51.0
Lj8P510T6 Lonicera japonica HOM05D008126 ORTHO05D000309 3.7e-06 55.8 55 50.9
Peaxi162Scf00756g00016 Petunia axillaris HOM05D001383 ORTHO05D000309 3.7e-06 55.8 66 43.9
Peaxi162Scf01302g00024 Petunia axillaris HOM05D001383 ORTHO05D000309 3.7e-06 55.8 74 37.8
Lj9P734T4 Lonicera japonica HOM05D008126 ORTHO05D000309 4.8e-06 55.5 55 50.9
Peaxi162Scf00064g02019 Petunia axillaris HOM05D001383 ORTHO05D000309 4.8e-06 55.5 67 43.3
Peaxi162Scf00273g01117 Petunia axillaris HOM05D001383 ORTHO05D000309 4.8e-06 55.5 67 44.8
Peaxi162Scf00658g00010 Petunia axillaris HOM05D001383 ORTHO05D000309 4.8e-06 55.5 67 40.3
Lj5P838T14 Lonicera japonica HOM05D008126 ORTHO05D000309 6.2e-06 55.1 85 43.5
Peaxi162Scf00039g00714 Petunia axillaris HOM05D001383 ORTHO05D000309 6.2e-06 55.1 67 43.3
Lj1P1017T43 Lonicera japonica HOM05D008126 ORTHO05D000309 8.1e-06 54.7 74 45.9


User provided reference genes

Program Settings