Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.15G127100 Carya illinoinensis HOM05D005975 ORTHO05D007373 0.0e+00 1358.2 692 100.0
MD06G1211600 Malus domestica HOM05D005975 ORTHO05D007373 0.0e+00 1100.1 693 79.8
MD14G1222100 Malus domestica HOM05D005975 ORTHO05D007373 0.0e+00 1097.8 693 79.5
Thecc.03G028700 Theobroma cacao HOM05D005975 ORTHO05D007373 0.0e+00 1084.3 696 80.2
RcHm_v2.0_Chr7g0184651 Rosa chinensis HOM05D005975 ORTHO05D007373 2.1e-310 1068.5 693 78.6
FAN04G2679 Fragaria x ananassa HOM05D005975 ORTHO05D007373 8.8e-309 1063.1 697 78.5
FvH4_5g12680 Fragaria vesca HOM05D005975 ORTHO05D007373 1.2e-308 1062.8 693 78.4
Gohir.A11G007000 Gossypium hirsutum HOM05D005975 ORTHO05D007373 1.5e-308 1062.4 695 77.7
Gorai.007G007400 Gossypium raimondii HOM05D005975 ORTHO05D007373 2.0e-308 1062.0 695 77.8
TAR374G1293 Trochodendron aralioides HOM05D005975 ORTHO05D007373 2.6e-308 1061.6 694 78.0
FAN13G1844 Fragaria x ananassa HOM05D005975 ORTHO05D007373 4.4e-308 1060.8 696 78.6
FAN18G3396 Fragaria x ananassa HOM05D005975 ORTHO05D007373 5.7e-308 1060.4 693 78.2
QL10p022556 Quercus lobata HOM05D005975 ORTHO05D007373 2.2e-307 1058.5 603 88.2
Gohir.D11G006100 Gossypium hirsutum HOM05D005975 ORTHO05D007373 1.4e-306 1055.8 695 77.3
Duzib205G1016 Durio zibethinus HOM05D005975 ORTHO05D007373 3.1e-306 1054.7 696 78.6
TAR622G0473 Trochodendron aralioides HOM05D005975 ORTHO05D007373 5.9e-305 1050.4 695 76.5
FAN08G0232 Fragaria x ananassa HOM05D005975 ORTHO05D007373 1.3e-304 1049.3 695 78.1
Haze_18619 Corylus avellana HOM05D005975 ORTHO05D007373 1.7e-304 1048.9 613 87.1
CSS0000913 Camellia sinensis var. sinensis HOM05D005975 ORTHO05D007373 4.7e-302 1040.8 711 76.4
Ciclev10019197m.g Citrus clementina HOM05D005975 ORTHO05D007373 8.0e-302 1040.0 681 77.7
Manes.05G139300 Manihot esculenta HOM05D005975 ORTHO05D007373 1.4e-301 1039.3 691 77.1
Potri.015G049900 Populus trichocarpa HOM05D005975 ORTHO05D007373 2.2e-299 1031.9 694 76.9
Hma1.2p1_0592F.1_g185285 Hydrangea macrophylla HOM05D005975 ORTHO05D007373 2.0e-297 1025.4 690 76.2
ClCG06G015000 Citrullus lanatus HOM05D005975 ORTHO05D007373 2.9e-296 1021.5 686 77.0
GSVIVG01008239001 Vitis vinifera HOM05D005975 ORTHO05D007373 1.1e-295 1019.6 694 76.2
PGR083G1175 Punica granatum HOM05D005975 ORTHO05D007373 1.5e-295 1019.2 672 77.5
MELO3C017289.2 Cucumis melo HOM05D005975 ORTHO05D007373 2.5e-295 1018.5 686 77.0
Sabra12G0043300 Salix brachista HOM05D005975 ORTHO05D007373 9.5e-295 1016.5 693 75.8
Potri.012G060200 Populus trichocarpa HOM05D005975 ORTHO05D007373 1.2e-294 1016.1 694 75.4
CsaV3_1G003650 Cucumis sativus L. HOM05D005975 ORTHO05D007373 1.5e-292 1009.2 686 76.7
Atru.chr9.776 Acer truncatum HOM05D005975 ORTHO05D007373 2.4e-290 1001.9 634 79.8
Glyma.17G121100 Glycine max HOM05D005975 ORTHO05D007373 3.2e-290 1001.5 692 73.7
Lj1g0009400 Lotus japonicus HOM05D005975 ORTHO05D007373 2.0e-289 998.8 696 75.0
Rhsim08G0136800 Rhododendron simsii HOM05D005975 ORTHO05D007373 3.5e-289 998.0 694 73.9
Sed0024013 Sechium edule HOM05D005975 ORTHO05D007373 1.7e-288 995.7 686 74.8
Ca_23135_v3 Cicer arietinum L. HOM05D005975 ORTHO05D007373 3.9e-288 994.6 694 73.9
Dinv38586 Davidia involucrata HOM05D005975 ORTHO05D007373 6.6e-288 993.8 604 83.6
Phvul.009G200500 Phaseolus vulgaris HOM05D005975 ORTHO05D007373 1.9e-287 992.3 693 73.2
Aqoxy3G03906 Aquilegia oxysepala HOM05D005975 ORTHO05D007373 4.3e-287 991.1 694 73.1
Glyma.04G152200 Glycine max HOM05D005975 ORTHO05D007373 7.3e-287 990.3 695 73.4
Eucgr.B00701 Eucalyptus grandis HOM05D005975 ORTHO05D007373 1.2e-286 989.6 668 76.0
Lalb_Chr12g0197601 Lupinus albus HOM05D005975 ORTHO05D007373 1.6e-286 989.2 673 75.5
Actinidia31028 Actinidia chinensis HOM05D005975 ORTHO05D007373 2.1e-286 988.8 670 75.7
Glyma.06G210800 Glycine max HOM05D005975 ORTHO05D007373 1.8e-285 985.7 695 73.4
PSO063G1047 Papaver somniferum HOM05D005975 ORTHO05D007373 1.8e-285 985.7 677 74.2
PSO782G2585 Papaver somniferum HOM05D005975 ORTHO05D007373 8.3e-283 976.9 676 74.0
Cc04_g07500 Coffea canephora HOM05D005975 ORTHO05D007373 2.4e-282 975.3 695 72.8
Psat1g024880 Pisum sativum HOM05D005975 ORTHO05D007373 2.0e-281 972.2 693 72.4
DCAR_015134 Daucus carota HOM05D005975 ORTHO05D007373 8.1e-278 960.3 691 70.8
AUR62032193 Chenopodium quinoa HOM05D005975 ORTHO05D007373 3.1e-277 958.4 673 71.6
AUR62036958 Chenopodium quinoa HOM05D005975 ORTHO05D007373 1.2e-276 956.4 668 72.2
Hund02524 Selenicereus undatus HOM05D005975 ORTHO05D007373 7.5e-276 953.7 670 72.1
Nitab4.5_0001599g0180 Nicotiana tabacum HOM05D005975 ORTHO05D007373 1.4e-274 949.5 683 71.4
Peaxi162Scf00015g00726 Petunia axillaris HOM05D005975 ORTHO05D007373 1.9e-274 949.1 671 72.0
MBI19_g38388_MAGBIO Magnolia biondii HOM05D005975 ORTHO05D007373 2.4e-274 948.7 697 71.2
TPR.G10356 Trifolium pratense HOM05D005975 ORTHO05D007373 7.1e-274 947.2 695 71.7
AT1G73930 Arabidopsis thaliana HOM05D005975 ORTHO05D007373 9.2e-274 946.8 672 72.2
Cpa.g.sc549.1 Carica papaya HOM05D005975 ORTHO05D007373 1.6e-273 946.0 601 80.2
Hund10002 Selenicereus undatus HOM05D005975 ORTHO05D007373 7.8e-273 943.7 669 71.0
AL2G33760 Arabidopsis lyrata HOM05D005975 ORTHO05D007373 2.3e-272 942.2 672 71.6
ECA232G0421 Erigeron canadensis HOM05D005975 ORTHO05D007373 1.9e-271 939.1 667 72.0
CARHR067040 Cardamine hirsuta HOM05D005975 ORTHO05D007373 7.3e-271 937.2 672 71.3
arahy.Tifrunner.gnm1.ann1.1K5T8S Arachis hypogaea HOM05D005975 ORTHO05D007373 9.5e-271 936.8 616 76.1
PGSC0003DMG400005625 Solanum tuberosum HOM05D005975 ORTHO05D007373 1.2e-270 936.4 668 71.7
VMungo1215G0359 Vigna mungo HOM05D005975 ORTHO05D007373 2.1e-270 935.6 671 71.1
Solyc03g119750.4 Solanum lycopersicum HOM05D005975 ORTHO05D007373 6.2e-270 934.1 668 71.7
Sopen03g038600 Solanum pennellii HOM05D005975 ORTHO05D007373 8.1e-270 933.7 668 71.3
Ah.11g047090 Amaranthus hybridus HOM05D005975 ORTHO05D007373 2.3e-269 932.2 667 70.9
Thhalv10018286m.g Eutrema salsugineum HOM05D005975 ORTHO05D007373 8.9e-269 930.2 672 71.6
Prupe.5G217600 Prunus persica HOM05D005975 ORTHO05D007373 2.6e-268 928.7 560 83.6
vmacro17674 Vaccinium macrocarpon HOM05D005975 ORTHO05D007373 2.6e-268 928.7 604 77.3
HanXRQChr09g0269781 Helianthus annuus HOM05D005975 ORTHO05D007373 5.8e-268 927.5 667 71.1
Oeu024324.1 Olea europaea HOM05D005975 ORTHO05D007373 7.6e-268 927.2 693 69.3
Nitab4.5_0000410g0070 Nicotiana tabacum HOM05D005975 ORTHO05D007373 3.7e-267 924.9 678 70.4
Sc10g0009550 Simmondsia chinensis HOM05D005975 ORTHO05D007373 4.9e-267 924.5 676 69.8
SGA_v2.0_scaffold25G10981 Striga asiatica HOM05D005975 ORTHO05D007373 1.9e-266 922.5 679 70.1
VMungo1309G0041 Vigna mungo HOM05D005975 ORTHO05D007373 3.2e-266 921.8 661 71.6
EL10Ac5g11254 Beta vulgaris HOM05D005975 ORTHO05D007373 3.0e-264 915.2 605 74.4
Lj9A429T54 Lonicera japonica HOM05D005975 ORTHO05D007373 3.9e-264 914.8 603 77.1
THA.LOC104808292 Tarenaya hassleriana HOM05D005975 ORTHO05D007373 4.3e-263 911.4 666 68.9
BolC2t09180H Brassica oleracea HOM05D005975 ORTHO05D007373 9.9e-260 900.2 676 69.1
BraA02t06937Z Brassica rapa HOM05D005975 ORTHO05D007373 2.2e-259 899.0 676 68.9
Migut.I00389 Erythranthe guttata HOM05D005975 ORTHO05D007373 1.4e-258 896.3 698 67.0
MSTRG.22940 Avicennia marina HOM05D005975 ORTHO05D007373 4.2e-258 894.8 605 74.0
BcaB05g24819 Brassica carinata HOM05D005975 ORTHO05D007373 5.4e-258 894.4 675 67.7
A02p18950 Brassica napus HOM05D005975 ORTHO05D007373 9.3e-258 893.6 676 68.5
BcaC03g15468 Brassica carinata HOM05D005975 ORTHO05D007373 2.3e-256 889.0 676 68.2
CAN.G438.116 Capsicum annuum HOM05D005975 ORTHO05D007373 2.3e-256 889.0 603 73.5
Lsat_1_v5_gn_3_10441 Lactuca sativa HOM05D005975 ORTHO05D007373 2.3e-256 889.0 669 68.2
ATR0753G136 Amborella trichopoda HOM05D005975 ORTHO05D007373 7.3e-255 884.0 753 62.9
C02p31490 Brassica napus HOM05D005975 ORTHO05D007373 1.3e-254 883.2 676 67.8
Sp5g29130 Schrenkiella parvula HOM05D005975 ORTHO05D007373 2.4e-253 879.0 673 67.8
Aa31LG4G4220 Aethionema arabicum HOM05D005975 ORTHO05D007373 2.1e-249 865.9 672 67.6
Phvul.003G176900 Phaseolus vulgaris HOM05D005975 ORTHO05D007373 4.2e-226 788.5 534 74.7
unitig_22.g6248 Utricularia gibba HOM05D005975 ORTHO05D007373 2.1e-225 786.2 684 60.8
Sabra15G0077800 Salix brachista HOM05D005975 ORTHO05D007373 7.9e-225 784.3 668 65.0
SalBow5G4970 Salvia bowleyana HOM05D005975 ORTHO05D007373 5.1e-224 781.6 672 62.6
Glyma.05G013100 Glycine max HOM05D005975 ORTHO05D007373 8.7e-224 780.8 690 62.6
SEGI_09157 Sequoiadendron giganteum HOM05D005975 ORTHO05D007373 7.7e-220 767.7 727 56.5
Os03g0259700 Oryza sativa ssp. japonica HOM05D005975 ORTHO05D007373 2.9e-219 765.8 702 58.7
COL.COLO4_22722 Corchorus olitorius HOM05D005975 ORTHO05D007373 3.0e-216 755.7 488 79.7
Pp3c12_18170 Physcomitrium patens HOM05D005975 ORTHO05D007373 3.9e-216 755.4 789 51.5
Pp3c4_11450 Physcomitrium patens HOM05D005975 ORTHO05D007373 1.5e-215 753.4 773 51.7
AagrBONN_evm.TU.Sc2ySwM_228.4839 Anthoceros agrestis HOM05D005975 ORTHO05D007373 7.4e-215 751.1 841 49.3
Mapoly0016s0160 Marchantia polymorpha HOM05D005975 ORTHO05D007373 6.5e-211 738.0 878 47.2
Carub.0002s2070 Capsella rubella HOM05D005975 ORTHO05D007373 5.7e-199 698.4 476 74.6
Zm00001eb011310 Zea mays HOM05D005975 ORTHO05D007373 6.3e-198 694.9 612 58.7
SMO367G0788 Selaginella moellendorffii HOM05D005975 ORTHO05D007373 7.2e-186 654.8 648 51.5
Nn3g17719 Nelumbo nucifera HOM05D005975 ORTHO05D007373 6.1e-185 651.7 423 78.7
CDE05G1454 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 3.4e-167 592.8 540 59.6
TAR622G1340 Trochodendron aralioides HOM05D005975 ORTHO05D007373 1.1e-165 587.8 454 68.9
CBR_g30105 Chara braunii HOM05D005975 ORTHO05D007373 9.8e-159 564.7 564 52.7
PSO074G0001 Papaver somniferum HOM05D005975 ORTHO05D007373 1.1e-128 464.9 310 74.8
CDE05G3359 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 3.4e-119 433.3 396 60.4
arahy.Tifrunner.gnm1.ann1.CEL6SJ Arachis hypogaea HOM05D005975 ORTHO05D007373 1.1e-114 418.3 275 77.8
HPP92_016579 Vanilla planifolia HOM05D005975 ORTHO05D007373 4.5e-103 379.8 342 57.6
HPP92_016580 Vanilla planifolia HOM05D005975 ORTHO05D007373 2.3e-99 367.5 276 66.7
BcaB05g24817 Brassica carinata HOM05D005975 ORTHO05D007373 4.4e-90 336.7 215 76.7
SMO146G0145 Selaginella moellendorffii HOM05D005975 ORTHO05D007373 7.2e-85 319.3 342 51.8
Zm00001eb237870 Zea mays HOM05D005975 ORTHO05D007373 7.7e-79 299.3 544 37.3
Zm00001eb078910 Zea mays HOM05D005975 ORTHO05D007373 6.6e-62 243.0 146 76.7
Nn3g18207 Nelumbo nucifera HOM05D005975 ORTHO05D007373 1.0e-46 192.6 140 70.0
CDE05G0573 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 4.7e-44 183.7 152 61.8
Cre14.g633500 Chlamydomonas reinhardtii HOM05D005975 ORTHO05D007373 1.4e-35 155.6 438 30.1
Cfa019814 Carpinus fangiana HOM05D005975 ORTHO05D007373 3.9e-22 110.9 70 82.9
Dinv38585 Davidia involucrata HOM05D005975 ORTHO05D007373 2.6e-18 98.2 65 76.9
Nn4g23789 Nelumbo nucifera HOM05D005975 ORTHO05D007373 4.5e-10 70.9 49 65.3
Nn1g03516 Nelumbo nucifera HOM05D005975 ORTHO05D007373 1.4e-08 65.9 49 67.3
Potri.001G289250 Populus trichocarpa HOM05D005975 ORTHO05D007373 2.4e-08 65.1 48 66.7
Lj9A429T53 Lonicera japonica HOM05D005975 ORTHO05D007373 2.1e-07 62.0 47 66.0


User provided reference genes

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