Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.15G122900 Carya illinoinensis HOM05D007960 ORTHO05D010026 2.8e-64 248.4 126 100.0
QL10p022177 Quercus lobata HOM05D007960 ORTHO05D010026 1.9e-31 139.4 124 58.9
Hma1.2p1_0340F.1_g130110 Hydrangea macrophylla HOM05D007960 ORTHO05D010026 1.1e-23 113.6 117 53.8
Medtr2g056070 Medicago truncatula HOM05D007960 ORTHO05D010026 4.2e-23 111.7 124 54.8
Haze_18568 Corylus avellana HOM05D007960 ORTHO05D010026 3.5e-22 108.6 130 52.3
Nn3g17652 Nelumbo nucifera HOM05D007960 ORTHO05D010026 4.6e-22 108.2 119 49.6
Haze_18570 Corylus avellana HOM05D007960 ORTHO05D010026 2.3e-21 105.9 123 52.8
Cfa019847 Carpinus fangiana HOM05D007960 ORTHO05D010026 8.7e-21 104.0 127 55.1
Ciclev10024471m.g Citrus clementina HOM05D007960 ORTHO05D010026 5.6e-20 101.3 134 49.3
Lalb_Chr13g0302531 Lupinus albus HOM05D007960 ORTHO05D010026 6.2e-19 97.8 93 57.0
Psat1g027680 Pisum sativum HOM05D007960 ORTHO05D010026 8.1e-19 97.4 121 48.8
Atru.chr9.701 Acer truncatum HOM05D007960 ORTHO05D010026 2.4e-18 95.9 114 52.6
Phvul.003G179700 Phaseolus vulgaris HOM05D007960 ORTHO05D010026 2.4e-18 95.9 120 50.0
Lj1g0016835 Lotus japonicus HOM05D007960 ORTHO05D010026 4.0e-18 95.1 121 45.5
FAN18G0932 Fragaria x ananassa HOM05D000227 ORTHO05D001491 5.3e-18 94.7 122 49.2
RcHm_v2.0_Chr7g0184281 Rosa chinensis HOM05D007960 ORTHO05D010026 1.2e-17 93.6 137 45.3
TPR.G31006 Trifolium pratense HOM05D007960 ORTHO05D010026 1.2e-17 93.6 124 47.6
TAR371G0138 Trochodendron aralioides HOM05D007960 ORTHO05D010026 1.2e-17 93.6 123 43.9
MD14G1219300 Malus domestica HOM05D007960 ORTHO05D010026 4.9e-16 88.2 139 42.4
VMungo1215G0525 Vigna mungo HOM05D007960 ORTHO05D010026 1.1e-15 87.0 108 48.1
Thecc.03G114600 Theobroma cacao HOM05D007960 ORTHO05D010026 5.4e-15 84.7 80 48.8
FAN13G1649 Fragaria x ananassa HOM05D000227 ORTHO05D001491 9.3e-15 84.0 109 49.5
Dinv38606 Davidia involucrata HOM05D000227 ORTHO05D001491 1.2e-14 83.6 85 56.5
Gohir.A03G074200 Gossypium hirsutum HOM05D007960 ORTHO05D010026 1.2e-14 83.6 132 42.4
Gohir.D03G100500 Gossypium hirsutum HOM05D007960 ORTHO05D010026 7.9e-14 80.9 132 41.7
Gorai.003G106000 Gossypium raimondii HOM05D007960 ORTHO05D010026 7.9e-14 80.9 132 41.7
Glyma.17G123900 Glycine max HOM05D007960 ORTHO05D010026 1.0e-13 80.5 123 43.9
Cc04_g07760 Coffea canephora HOM05D007960 ORTHO05D010026 1.3e-13 80.1 100 47.0
Manes.01G022400 Manihot esculenta HOM05D007960 ORTHO05D010026 3.0e-13 79.0 126 46.0
Aa31LG4G4360 Aethionema arabicum HOM05D007960 ORTHO05D010026 5.1e-13 78.2 115 41.7
BcaC08g46805 Brassica carinata HOM05D007960 ORTHO05D010026 5.1e-13 78.2 148 38.5
BolC6t39852H Brassica oleracea HOM05D007960 ORTHO05D010026 5.1e-13 78.2 148 38.5
C06p48150 Brassica napus HOM05D007960 ORTHO05D010026 6.6e-13 77.8 148 39.2
Prupe.5G214000 Prunus persica HOM05D007960 ORTHO05D010026 8.7e-13 77.4 139 43.9
Thhalv10019432m.g Eutrema salsugineum HOM05D007960 ORTHO05D010026 1.9e-12 76.3 133 42.9
Peaxi162Scf00017g03010 Petunia axillaris HOM05D007960 ORTHO05D001491 2.5e-12 75.9 109 45.0
Carub.0002s2086 Capsella rubella HOM05D007960 ORTHO05D010026 3.3e-12 75.5 128 39.8
CARHR067210 Cardamine hirsuta HOM05D007960 ORTHO05D010026 3.3e-12 75.5 139 37.4
Cpa.g.sc13.82 Carica papaya HOM05D007960 ORTHO05D010026 7.4e-12 74.3 116 44.8
PSO063G1775 Papaver somniferum HOM05D007960 ORTHO05D010026 9.6e-12 73.9 131 37.4
Sopen03g033530 Solanum pennellii HOM05D007960 ORTHO05D010026 9.6e-12 73.9 115 41.7
Solyc03g114430.1 Solanum lycopersicum HOM05D007960 ORTHO05D010026 1.3e-11 73.6 117 41.0
A07p39920 Brassica napus HOM05D007960 ORTHO05D010026 1.6e-11 73.2 146 37.0
BraA07t31538Z Brassica rapa HOM05D007960 ORTHO05D010026 1.6e-11 73.2 146 37.0
Sp5g29280 Schrenkiella parvula HOM05D007960 ORTHO05D010026 1.6e-11 73.2 135 37.8
Dinv36868 Davidia involucrata HOM05D007960 ORTHO05D010026 2.1e-11 72.8 120 44.2
Nitab4.5_0000646g0060 Nicotiana tabacum HOM05D007960 ORTHO05D010026 2.8e-11 72.4 119 42.9
BcaC08g46834 Brassica carinata HOM05D007960 ORTHO05D010026 3.6e-11 72.0 118 37.3
Ca_02635_v3 Cicer arietinum L. HOM05D007960 ORTHO05D010026 3.6e-11 72.0 80 45.0
Ca_30215_v3 Cicer arietinum L. HOM05D007960 ORTHO05D010026 3.6e-11 72.0 80 45.0
Nitab4.5_0004342g0110 Nicotiana tabacum HOM05D007960 ORTHO05D010026 4.8e-11 71.6 123 41.5
Glyma.05G015600 Glycine max HOM05D007960 ORTHO05D010026 1.4e-10 70.1 111 44.1
AT1G74055 Arabidopsis thaliana HOM05D007960 ORTHO05D010026 1.8e-10 69.7 117 37.6
PSO782G5681 Papaver somniferum HOM05D007960 ORTHO05D010026 2.4e-10 69.3 131 37.4
PGSC0003DMG400041876 Solanum tuberosum HOM05D007960 ORTHO05D010026 3.1e-10 68.9 115 40.0
Rhsim11G0054500 Rhododendron simsii HOM05D007960 ORTHO05D010026 4.0e-10 68.6 109 41.3
AL2G33950 Arabidopsis lyrata HOM05D007960 ORTHO05D010026 5.3e-10 68.2 117 38.5
PGR044G2003 Punica granatum HOM05D007960 ORTHO05D010026 5.3e-10 68.2 140 33.6
Sc04g0003840 Simmondsia chinensis HOM05D007960 ORTHO05D010026 5.3e-10 68.2 121 38.0
THA.LOC104812118 Tarenaya hassleriana HOM05D007960 ORTHO05D010026 1.5e-09 66.6 123 43.1
Rhsim08G0149000 Rhododendron simsii HOM05D007960 ORTHO05D010026 2.6e-09 65.9 105 41.9
Sc04g0003850 Simmondsia chinensis HOM05D007960 ORTHO05D010026 3.4e-09 65.5 125 36.0
Sc04g0003950 Simmondsia chinensis HOM05D007960 ORTHO05D010026 4.5e-09 65.1 120 37.5
ClCG04G011400 Citrullus lanatus HOM05D007960 ORTHO05D010026 5.8e-09 64.7 100 43.0
ATR0730G198 Amborella trichopoda HOM05D007960 ORTHO05D010026 9.9e-09 63.9 123 36.6
Lalb_Chr12g0197501 Lupinus albus HOM05D007960 ORTHO05D010026 6.4e-08 61.2 83 45.8
Duzib205G0322 Durio zibethinus HOM05D007960 ORTHO05D010026 1.4e-07 60.1 61 42.6
Actinidia16062 Actinidia chinensis HOM05D000227 ORTHO05D001491 1.9e-07 59.7 63 52.4
Lsat_1_v5_gn_1_15660 Lactuca sativa HOM05D007960 ORTHO05D010026 1.9e-07 59.7 116 42.2
BraA07t30596Z Brassica rapa HOM05D007960 ORTHO05D010026 3.2e-07 58.9 131 32.1
Sed0018526 Sechium edule HOM05D007960 ORTHO05D010026 3.2e-07 58.9 79 40.5
Ah.11g047280 Amaranthus hybridus HOM05D007960 ORTHO05D010026 9.3e-07 57.4 96 40.6
Manes.05G117000 Manihot esculenta HOM05D007960 ORTHO05D010026 1.2e-06 57.0 80 42.5
TWI15G0545 Tripterygium wilfordii HOM05D056897 ORTHO05D010026 2.1e-06 56.2 134 38.8
EL10Ac5g11226 Beta vulgaris HOM05D007960 ORTHO05D010026 4.6e-06 55.1 119 32.8


User provided reference genes

Program Settings