Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.15G111100 Carya illinoinensis HOM05D007449 ORTHO05D009504 2.5e-92 342.0 169 100.0
Cfa017774 Carpinus fangiana HOM05D007449 ORTHO05D009504 1.7e-72 276.2 160 84.4
RcHm_v2.0_Chr5g0022981 Rosa chinensis HOM05D007449 ORTHO05D009504 7.4e-68 260.8 154 81.8
FAN11G1945 Fragaria x ananassa HOM05D007449 ORTHO05D009504 3.7e-67 258.5 154 79.2
Sabra10G0135300 Salix brachista HOM05D007449 ORTHO05D009504 1.4e-66 256.5 169 72.8
Glyma.08G160000 Glycine max HOM05D007449 ORTHO05D009504 1.8e-66 256.1 169 71.0
Potri.010G175600 Populus trichocarpa HOM05D007449 ORTHO05D009504 3.1e-66 255.4 169 72.8
FvH4_3g13790 Fragaria vesca HOM05D007449 ORTHO05D009504 7.0e-66 254.2 154 79.2
FAN21G0170 Fragaria x ananassa HOM05D007449 ORTHO05D009504 7.0e-66 254.2 154 79.2
ECA236G3627 Erigeron canadensis HOM05D007449 ORTHO05D009504 9.1e-66 253.8 158 76.6
MD05G1240900 Malus domestica HOM05D007449 ORTHO05D009504 1.2e-65 253.4 165 76.4
FAN16G1652 Fragaria x ananassa HOM05D007449 ORTHO05D009504 2.6e-65 252.3 154 77.3
HanXRQChr11g0335831 Helianthus annuus HOM05D007449 ORTHO05D009504 2.6e-65 252.3 159 74.2
GSVIVG01036691001 Vitis vinifera HOM05D007449 ORTHO05D009504 2.6e-65 252.3 167 73.7
Prupe.4G124700 Prunus persica HOM05D007449 ORTHO05D009504 5.9e-65 251.1 157 76.4
Sed0001463 Sechium edule HOM05D007449 ORTHO05D009504 1.3e-64 250.0 166 74.7
Dinv42450 Davidia involucrata HOM05D007449 ORTHO05D009504 1.7e-64 249.6 155 76.1
COL.COLO4_32270 Corchorus olitorius HOM05D007449 ORTHO05D009504 2.2e-64 249.2 154 75.3
Glyma.15G266900 Glycine max HOM05D007449 ORTHO05D009504 2.2e-64 249.2 169 69.2
Lsat_1_v5_gn_7_111001 Lactuca sativa HOM05D007449 ORTHO05D009504 3.8e-64 248.4 153 75.2
Ciclev10006094m.g Citrus clementina HOM05D007449 ORTHO05D009504 6.5e-64 247.7 154 77.3
Aqoxy5G02136 Aquilegia oxysepala HOM05D007449 ORTHO05D009504 1.4e-63 246.5 160 71.9
CSS0049228 Camellia sinensis var. sinensis HOM05D007449 ORTHO05D009504 1.4e-63 246.5 153 73.2
CsaV3_6G013330 Cucumis sativus L. HOM05D007449 ORTHO05D009504 1.4e-63 246.5 154 76.6
Psat6g047080 Pisum sativum HOM05D007449 ORTHO05D009504 1.4e-63 246.5 169 69.2
Medtr1g046590 Medicago truncatula HOM05D007449 ORTHO05D009504 1.9e-63 246.1 169 69.2
ClCG02G018850 Citrullus lanatus HOM05D007449 ORTHO05D009504 2.5e-63 245.7 163 71.2
Lalb_Chr01g0015631 Lupinus albus HOM05D007449 ORTHO05D009504 2.5e-63 245.7 167 69.5
MELO3C019608.2 Cucumis melo HOM05D007449 ORTHO05D009504 4.2e-63 245.0 163 72.4
SEGI_20644 Sequoiadendron giganteum HOM05D007449 ORTHO05D009504 9.4e-63 243.8 155 75.5
arahy.Tifrunner.gnm1.ann1.4RN51I Arachis hypogaea HOM05D007449 ORTHO05D009504 1.6e-62 243.0 169 69.2
arahy.Tifrunner.gnm1.ann1.VWXD6N Arachis hypogaea HOM05D007449 ORTHO05D009504 1.6e-62 243.0 169 69.2
Duzib213G0878 Durio zibethinus HOM05D007449 ORTHO05D009504 1.6e-62 243.0 153 73.2
TPR.G11303 Trifolium pratense HOM05D007449 ORTHO05D009504 4.7e-62 241.5 169 66.9
Manes.16G050159 Manihot esculenta HOM05D007449 ORTHO05D009504 1.0e-61 240.4 158 72.8
Gohir.A13G127500 Gossypium hirsutum HOM05D007449 ORTHO05D009504 1.4e-61 240.0 157 69.4
CANSAT56G2387 Cannabis sativa HOM05D007449 ORTHO05D009504 1.8e-61 239.6 153 77.1
Gohir.D13G131200 Gossypium hirsutum HOM05D007449 ORTHO05D009504 2.3e-61 239.2 157 69.4
Hma1.2p1_1417F.1_g282110 Hydrangea macrophylla HOM05D007449 ORTHO05D009504 3.9e-61 238.4 162 72.2
Atru.chr1.9 Acer truncatum HOM05D007449 ORTHO05D009504 6.7e-61 237.7 153 74.5
THA.LOC104812400 Tarenaya hassleriana HOM05D007449 ORTHO05D009504 8.8e-61 237.3 153 73.2
Gorai.013G147200 Gossypium raimondii HOM05D007449 ORTHO05D009504 1.5e-60 236.5 157 68.8
Nn1g09860 Nelumbo nucifera HOM05D007449 ORTHO05D009504 2.0e-60 236.1 153 73.2
TWI38G0722 Tripterygium wilfordii HOM05D007449 ORTHO05D009504 3.3e-60 235.3 166 68.1
TWI38G2117 Tripterygium wilfordii HOM05D007449 ORTHO05D009504 3.3e-60 235.3 166 68.1
MBI02_g42634_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 4.4e-60 235.0 154 74.7
Rhsim10G0133000 Rhododendron simsii HOM05D007449 ORTHO05D009504 4.4e-60 235.0 198 60.1
Os01g0679600 Oryza sativa ssp. japonica HOM05D007449 ORTHO05D009504 1.3e-59 233.4 155 69.0
Solyc11g011610.2 Solanum lycopersicum HOM05D007449 ORTHO05D009504 1.7e-59 233.0 153 72.5
PGSC0003DMG400013314 Solanum tuberosum HOM05D007449 ORTHO05D009504 1.7e-59 233.0 153 72.5
TAR629G0115 Trochodendron aralioides HOM05D007449 ORTHO05D009504 2.8e-59 232.3 191 60.7
Zm00001eb156770 Zea mays HOM05D007449 ORTHO05D009504 8.2e-59 230.7 165 65.5
Migut.H01650 Erythranthe guttata HOM05D007449 ORTHO05D009504 1.8e-58 229.6 162 64.8
Sopen11g006460 Solanum pennellii HOM05D007449 ORTHO05D009504 2.4e-58 229.2 153 71.2
Solyc11g011620.3 Solanum lycopersicum HOM05D007449 ORTHO05D009504 4.1e-58 228.4 151 70.9
Nitab4.5_0006598g0010 Nicotiana tabacum HOM05D007449 ORTHO05D009504 5.3e-58 228.0 158 67.7
Peaxi162Scf00124g01733 Petunia axillaris HOM05D007449 ORTHO05D009504 5.3e-58 228.0 153 69.3
CAN.G222.124 Capsicum annuum HOM05D007449 ORTHO05D009504 7.0e-58 227.6 153 70.6
Thhalv10019230m.g Eutrema salsugineum HOM05D007449 ORTHO05D009504 7.0e-58 227.6 158 70.9
MSTRG.13092 Avicennia marina HOM05D007449 ORTHO05D009504 9.1e-58 227.3 163 66.3
CDE02G1458 Ceratophyllum demersum HOM05D001125 ORTHO05D003189 9.1e-58 227.3 154 70.1
SGA_v2.0_scaffold49G18211 Striga asiatica HOM05D007449 ORTHO05D009504 1.2e-57 226.9 162 66.7
Nitab4.5_0005124g0020 Nicotiana tabacum HOM05D007449 ORTHO05D009504 2.6e-57 225.7 158 68.4
ATR0109G018 Amborella trichopoda HOM05D007449 ORTHO05D009504 5.9e-57 224.6 154 70.1
Cc08_g13080 Coffea canephora HOM05D007449 ORTHO05D009504 1.0e-56 223.8 161 65.8
AT1G79260 Arabidopsis thaliana HOM05D007449 ORTHO05D009504 1.7e-56 223.0 157 68.8
vmacro12790 Vaccinium macrocarpon HOM05D007449 ORTHO05D009504 3.8e-56 221.9 233 51.5
Carub.0002s2613 Capsella rubella HOM05D007449 ORTHO05D009504 6.5e-56 221.1 156 69.9
Oeu002792.1 Olea europaea HOM05D007449 ORTHO05D009775 6.5e-56 221.1 167 62.9
HPP92_008133 Vanilla planifolia HOM05D007449 ORTHO05D009504 6.5e-56 221.1 167 65.9
Actinidia33338 Actinidia chinensis HOM05D007449 ORTHO05D009504 1.1e-55 220.3 133 78.9
Nitab4.5_0001438g0030 Nicotiana tabacum HOM05D007449 ORTHO05D009504 1.5e-55 219.9 158 65.8
HPP92_008185 Vanilla planifolia HOM05D007449 ORTHO05D009504 1.5e-55 219.9 167 65.3
C02p36470 Brassica napus HOM05D007449 ORTHO05D009504 2.5e-55 219.2 157 65.6
AL2G39860 Arabidopsis lyrata HOM05D007449 ORTHO05D009504 4.2e-55 218.4 172 64.5
BcaB05g25191 Brassica carinata HOM05D007449 ORTHO05D009504 5.5e-55 218.0 153 68.0
AagrBONN_evm.TU.Sc2ySwM_362.2319 Anthoceros agrestis HOM05D007449 ORTHO05D009504 1.2e-54 216.9 152 65.8
BcaC03g15880 Brassica carinata HOM05D007449 ORTHO05D009504 1.2e-54 216.9 157 65.0
BolC2t09646H Brassica oleracea HOM05D007449 ORTHO05D009504 1.2e-54 216.9 153 66.7
BraA02t07273Z Brassica rapa HOM05D007449 ORTHO05D009504 1.2e-54 216.9 153 67.3
PGR031G0327 Punica granatum HOM05D007449 ORTHO05D009504 1.2e-54 216.9 158 67.7
Sp5g34340 Schrenkiella parvula HOM05D007449 ORTHO05D009504 1.2e-54 216.9 153 67.3
A02p22730 Brassica napus HOM05D007449 ORTHO05D009504 1.0e-53 213.8 153 66.7
Phvul.005G043600 Phaseolus vulgaris HOM05D007449 ORTHO05D009504 1.4e-53 213.4 169 61.5
Haze_18462 Corylus avellana HOM05D007449 ORTHO05D009504 1.8e-53 213.0 120 82.5
Aa31LG4G1730 Aethionema arabicum HOM05D007449 ORTHO05D009504 3.3e-52 208.8 175 60.6
SMO364G0724 Selaginella moellendorffii HOM05D007449 ORTHO05D009504 5.7e-52 208.0 155 65.8
QL04p096242 Quercus lobata HOM05D007449 ORTHO05D009504 1.3e-51 206.8 115 83.5
QL04p096050 Quercus lobata HOM05D007449 ORTHO05D009504 2.8e-51 205.7 114 83.3
Mapoly0054s0111 Marchantia polymorpha HOM05D007449 ORTHO05D009504 2.0e-49 199.5 151 62.9
arahy.Tifrunner.gnm1.ann1.FIRH26 Arachis hypogaea HOM05D007449 ORTHO05D009504 1.1e-47 193.7 133 69.9
Eucgr.F04482 Eucalyptus grandis HOM05D007449 ORTHO05D009504 2.5e-47 192.6 150 62.0
Pp3c6_12570 Physcomitrium patens HOM05D007449 ORTHO05D009504 2.8e-43 179.1 114 71.9
Nitab4.5_0009898g0010 Nicotiana tabacum HOM05D007449 ORTHO05D009504 3.1e-42 175.6 158 55.7
FAN25G3406 Fragaria x ananassa HOM05D007449 ORTHO05D009504 5.4e-42 174.9 108 78.7
Ca_03327_v3 Cicer arietinum L. HOM05D007449 ORTHO05D009504 1.0e-40 170.6 110 75.5
DCAR_013701 Daucus carota HOM05D007449 ORTHO05D009504 2.1e-38 162.9 96 72.9
Lj2A6T27 Lonicera japonica HOM05D007449 ORTHO05D009504 8.9e-37 157.5 93 77.4
MBI02_g17887_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 3.1e-34 149.1 154 54.5
Nitab4.5_0001650g0100 Nicotiana tabacum HOM05D000057 ORTHO05D000021 2.4e-26 122.9 119 53.8
Aa31LG4G1740 Aethionema arabicum HOM05D007449 ORTHO05D009504 1.6e-22 110.2 155 41.3
Nitab4.5_0007284g0070 Nicotiana tabacum HOM05D000057 ORTHO05D000021 2.4e-18 96.3 63 73.0
TPR.G35695 Trifolium pratense HOM05D000290 ORTHO05D044376 5.1e-16 88.6 61 72.1
Gohir.D03G088000 Gossypium hirsutum HOM05D007449 ORTHO05D000032 4.3e-15 85.5 106 48.1
MBI02_g30541_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 2.0e-12 76.6 81 58.0
Glyma.14G034600 Glycine max HOM05D007449 ORTHO05D009504 1.9e-10 70.1 63 44.4


User provided reference genes

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