Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.15G085600 Carya illinoinensis HOM05D007757 ORTHO05D009619 5.4e-74 280.8 132 100.0
Haze_17487 Corylus avellana HOM05D007757 ORTHO05D009619 6.3e-38 161.0 137 63.5
Sabra10G0094600 Salix brachista HOM05D007757 ORTHO05D009619 2.1e-25 119.4 129 48.1
Thecc.02G230200 Theobroma cacao HOM05D007757 ORTHO05D009619 5.3e-21 104.8 132 47.0
Duzib248G1397 Durio zibethinus HOM05D007757 ORTHO05D009619 1.2e-20 103.6 130 47.7
Potri.010G124700 Populus trichocarpa HOM05D007757 ORTHO05D009619 1.2e-20 103.6 129 41.1
TWI75G0183 Tripterygium wilfordii HOM05D007757 ORTHO05D009619 4.5e-20 101.7 129 42.6
COL.COLO4_37757 Corchorus olitorius HOM05D007757 ORTHO05D009619 5.0e-19 98.2 131 43.5
Lalb_Chr02g0145961 Lupinus albus HOM05D007757 ORTHO05D009619 3.2e-18 95.5 131 43.5
Ca_11172_v3 Cicer arietinum L. HOM05D007757 ORTHO05D009619 9.4e-18 94.0 139 39.6
Manes.06G067700 Manihot esculenta HOM05D007757 ORTHO05D009619 1.2e-17 93.6 126 46.0
Peaxi162Scf00382g00073 Petunia axillaris HOM05D007757 ORTHO05D009619 1.6e-17 93.2 137 43.1
Gorai.012G123000 Gossypium raimondii HOM05D007757 ORTHO05D009619 2.1e-17 92.8 133 42.1
Lalb_Chr06g0166051 Lupinus albus HOM05D007757 ORTHO05D009619 2.1e-17 92.8 117 42.7
Actinidia16654 Actinidia chinensis HOM05D007757 ORTHO05D009619 2.7e-17 92.4 133 42.1
Gohir.D04G138100 Gossypium hirsutum HOM05D007757 ORTHO05D009619 3.6e-17 92.0 133 43.6
Actinidia14892 Actinidia chinensis HOM05D007757 ORTHO05D009619 6.1e-17 91.3 71 54.9
MD13G1041700 Malus domestica HOM05D007757 ORTHO05D009619 8.0e-17 90.9 134 39.6
TPR.G1503 Trifolium pratense HOM05D007757 ORTHO05D009619 8.0e-17 90.9 60 60.0
Cpa.g.sc1.36 Carica papaya HOM05D007757 ORTHO05D009619 1.0e-16 90.5 91 46.2
DCAR_030156 Daucus carota HOM05D007757 ORTHO05D009619 1.0e-16 90.5 91 47.3
Prupe.1G311500 Prunus persica HOM05D007757 ORTHO05D009619 2.3e-16 89.4 130 43.1
Nitab4.5_0000791g0090 Nicotiana tabacum HOM05D007757 ORTHO05D009619 5.2e-16 88.2 137 39.4
Peaxi162Scf00382g00086 Petunia axillaris HOM05D007757 ORTHO05D009619 5.2e-16 88.2 138 42.0
CAN.G610.82 Capsicum annuum HOM05D007757 ORTHO05D009619 6.7e-16 87.8 136 39.0
Rhsim09G0107900 Rhododendron simsii HOM05D007757 ORTHO05D009619 6.7e-16 87.8 99 47.5
Medtr1g110790 Medicago truncatula HOM05D007757 ORTHO05D009619 1.5e-15 86.7 59 57.6
THA.LOC104800008 Tarenaya hassleriana HOM05D007757 ORTHO05D009619 2.8e-14 82.4 51 64.7
THA.LOC104821934 Tarenaya hassleriana HOM05D007757 ORTHO05D009619 2.8e-14 82.4 51 60.8
Solyc05g009340.1 Solanum lycopersicum HOM05D007757 ORTHO05D009619 3.7e-14 82.0 129 38.0
Sopen05g005100 Solanum pennellii HOM05D007757 ORTHO05D009619 3.7e-14 82.0 129 38.0
PGSC0003DMG400014580 Solanum tuberosum HOM05D007757 ORTHO05D009619 1.1e-13 80.5 131 37.4
RcHm_v2.0_Chr4g0435141 Rosa chinensis HOM05D007757 ORTHO05D009619 3.1e-13 79.0 142 41.5
Gorai.002G217900 Gossypium raimondii HOM05D007757 ORTHO05D009619 9.1e-13 77.4 86 41.9
Phvul.007G027400 Phaseolus vulgaris HOM05D007757 ORTHO05D009619 9.1e-13 77.4 62 53.2
Gohir.D01G175600 Gossypium hirsutum HOM05D007757 ORTHO05D009619 1.2e-12 77.0 86 41.9
VMungo0720G1194 Vigna mungo HOM05D007757 ORTHO05D009619 1.2e-12 77.0 62 51.6
Glyma.20G115900 Glycine max HOM05D007757 ORTHO05D009619 1.6e-12 76.6 59 52.5
Nn3g17018 Nelumbo nucifera HOM05D021434 ORTHO05D009619 1.6e-12 76.6 112 37.5
Psat6g227960 Pisum sativum HOM05D007757 ORTHO05D009619 1.6e-12 76.6 143 37.8
FvH4_4g27340 Fragaria vesca HOM05D007757 ORTHO05D009619 2.0e-12 76.3 142 40.1
FAN12G3307 Fragaria x ananassa HOM05D007757 ORTHO05D009619 2.0e-12 76.3 142 40.1
CANSAT01G0578 Cannabis sativa HOM05D007757 ORTHO05D009619 3.5e-12 75.5 61 55.7
Ciclev10017153m.g Citrus clementina HOM05D007757 ORTHO05D009619 5.9e-12 74.7 130 42.3
FAN12G3266 Fragaria x ananassa HOM05D007757 ORTHO05D009619 5.9e-12 74.7 142 39.4
Carub.0002s1501 Capsella rubella HOM05D007757 ORTHO05D009619 7.7e-12 74.3 53 60.4
FAN07G0332 Fragaria x ananassa HOM05D007757 ORTHO05D009619 1.7e-11 73.2 144 38.9
A07p34900 Brassica napus HOM05D007757 ORTHO05D009619 2.2e-11 72.8 78 42.3
C06p41430 Brassica napus HOM05D007757 ORTHO05D009619 2.2e-11 72.8 78 42.3
BolC6t39280H Brassica oleracea HOM05D007757 ORTHO05D009619 2.2e-11 72.8 78 42.3
Sp5g23570 Schrenkiella parvula HOM05D007757 ORTHO05D009619 3.8e-11 72.0 50 60.0
Cc11_g10120 Coffea canephora HOM05D007757 ORTHO05D009619 5.0e-11 71.6 133 36.8
Glyma.10G274100 Glycine max HOM05D007757 ORTHO05D009619 5.0e-11 71.6 61 50.8
Nn4g23846 Nelumbo nucifera HOM05D021434 ORTHO05D009619 5.0e-11 71.6 111 36.0
BcaC03g14960 Brassica carinata HOM05D007757 ORTHO05D009619 6.5e-11 71.2 53 54.7
BcaC08g46271 Brassica carinata HOM05D007757 ORTHO05D009619 6.5e-11 71.2 74 43.2
C02p24780 Brassica napus HOM05D007757 ORTHO05D009619 6.5e-11 71.2 53 54.7
BolC2t08570H Brassica oleracea HOM05D007757 ORTHO05D009619 6.5e-11 71.2 53 54.7
AT1G68500 Arabidopsis thaliana HOM05D007757 ORTHO05D009619 8.5e-11 70.9 43 62.8
BcaB03g15824 Brassica carinata HOM05D007757 ORTHO05D009619 1.5e-10 70.1 74 41.9
Nn3g17848 Nelumbo nucifera HOM05D021434 ORTHO05D009619 1.5e-10 70.1 108 34.3
CARHR061280 Cardamine hirsuta HOM05D007757 ORTHO05D009619 1.9e-10 69.7 43 60.5
BcaB05g24389 Brassica carinata HOM05D007757 ORTHO05D009619 3.2e-10 68.9 53 52.8
BraA02t06576Z Brassica rapa HOM05D007757 ORTHO05D009619 3.2e-10 68.9 53 52.8
Sc11g0003440 Simmondsia chinensis HOM05D007757 ORTHO05D009619 4.2e-10 68.6 110 38.2
AL2G27370 Arabidopsis lyrata HOM05D007757 ORTHO05D009619 9.4e-10 67.4 40 65.0
A02p15100 Brassica napus HOM05D007757 ORTHO05D009619 9.4e-10 67.4 102 34.3
MSTRG.2233 Avicennia marina HOM05D007757 ORTHO05D009619 2.1e-09 66.2 101 34.7
Migut.E00343 Erythranthe guttata HOM05D007757 ORTHO05D009619 3.6e-09 65.5 131 32.1
Thhalv10019384m.g Eutrema salsugineum HOM05D007757 ORTHO05D009619 3.6e-09 65.5 43 55.8
MD16G1042600 Malus domestica HOM05D007757 ORTHO05D009619 4.7e-09 65.1 56 51.8
CARHR026040 Cardamine hirsuta HOM05D007757 ORTHO05D009619 1.4e-08 63.5 50 52.0
EL10Ac6g14396 Beta vulgaris HOM05D007757 ORTHO05D009619 5.2e-08 61.6 54 53.7
Lj5g0000209 Lotus japonicus HOM05D007757 ORTHO05D009619 8.8e-08 60.8 60 46.7
AT1G25422 Arabidopsis thaliana HOM05D007757 ORTHO05D009619 1.2e-07 60.5 43 55.8
AUR62035218 Chenopodium quinoa HOM05D007757 ORTHO05D009619 1.2e-07 60.5 60 46.7
Carub.0001s2507 Capsella rubella HOM05D007757 ORTHO05D009619 5.7e-07 58.2 41 56.1
AL1G39890 Arabidopsis lyrata HOM05D007757 ORTHO05D009619 7.5e-07 57.8 41 56.1


User provided reference genes

Program Settings