Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.15G081800 Carya illinoinensis HOM05D004490 ORTHO05D005353 1.6e-196 689.5 406 100.0
CiPaw.16G061300 Carya illinoinensis HOM05D004490 ORTHO05D005353 6.4e-57 225.7 234 57.7
Cfa018184 Carpinus fangiana HOM05D004490 ORTHO05D005353 6.0e-47 192.6 223 53.8
Potri.019G083700 Populus trichocarpa HOM05D004490 ORTHO05D005353 2.3e-43 180.6 202 52.0
Atru.chr12.1269 Acer truncatum HOM05D004490 ORTHO05D005353 3.7e-41 173.3 195 52.8
Haze_17934 Corylus avellana HOM05D004490 ORTHO05D005353 7.1e-40 169.1 297 54.5
Sabra19G0095100 Salix brachista HOM05D004490 ORTHO05D005353 7.1e-40 169.1 252 43.7
arahy.Tifrunner.gnm1.ann1.90XUFN Arachis hypogaea HOM05D004490 ORTHO05D005353 8.6e-38 162.2 199 47.2
QL02p033840 Quercus lobata HOM05D004490 ORTHO05D005353 8.6e-38 162.2 134 61.2
arahy.Tifrunner.gnm1.ann1.2Y7GNB Arachis hypogaea HOM05D004490 ORTHO05D005353 1.5e-37 161.4 199 47.2
Lj5g0002115 Lotus japonicus HOM05D004490 ORTHO05D005353 7.3e-37 159.1 194 49.0
GSVIVG01034483001 Vitis vinifera HOM05D004490 ORTHO05D005353 7.3e-37 159.1 210 46.2
TWI63G0531 Tripterygium wilfordii HOM05D004490 ORTHO05D005353 9.5e-37 158.7 215 47.4
Dinv41710 Davidia involucrata HOM05D004490 ORTHO05D005353 3.6e-36 156.8 229 43.7
TAR208G0002 Trochodendron aralioides HOM05D004490 ORTHO05D005353 3.6e-36 156.8 200 47.5
VMungo0720G0360 Vigna mungo HOM05D004490 ORTHO05D005353 3.6e-36 156.8 204 47.1
Gohir.D13G125400 Gossypium hirsutum HOM05D004490 ORTHO05D005353 1.1e-35 155.2 193 49.2
Hma1.2p1_0363F.1_g136650 Hydrangea macrophylla HOM05D004490 ORTHO05D005353 1.4e-35 154.8 194 46.4
Hma1.2p1_0363F.1_g136660 Hydrangea macrophylla HOM05D004490 ORTHO05D005353 1.4e-35 154.8 194 46.4
Gorai.013G140400 Gossypium raimondii HOM05D004490 ORTHO05D005353 1.8e-35 154.5 193 49.2
Thecc.08G183200 Theobroma cacao HOM05D004490 ORTHO05D005353 1.8e-35 154.5 210 47.6
Gohir.A13G121400 Gossypium hirsutum HOM05D004490 ORTHO05D005353 2.4e-35 154.1 203 48.3
Lalb_Chr21g0305821 Lupinus albus HOM05D004490 ORTHO05D005353 3.1e-35 153.7 195 47.7
Glyma.10G216200 Glycine max HOM05D004490 ORTHO05D005353 6.8e-35 152.5 203 45.8
CSS0029963 Camellia sinensis var. sinensis HOM05D004490 ORTHO05D005353 2.0e-34 151.0 199 44.2
Glyma.20G175700 Glycine max HOM05D004490 ORTHO05D005353 2.0e-34 151.0 203 45.3
Solyc11g018670.3 Solanum lycopersicum HOM05D004490 ORTHO05D005353 3.4e-34 150.2 235 40.9
Phvul.007G089700 Phaseolus vulgaris HOM05D004490 ORTHO05D005353 4.4e-34 149.8 204 47.1
Ca_10614_v3 Cicer arietinum L. HOM05D004490 ORTHO05D005353 5.8e-34 149.4 190 47.4
Duzib177G0006 Durio zibethinus HOM05D004490 ORTHO05D005353 5.8e-34 149.4 194 49.5
Ciclev10000724m.g Citrus clementina HOM05D004490 ORTHO05D005353 7.6e-34 149.1 219 45.7
Manes.02G191800 Manihot esculenta HOM05D004490 ORTHO05D005353 7.6e-34 149.1 197 45.2
vmacro11670 Vaccinium macrocarpon HOM05D004490 ORTHO05D005353 1.7e-33 147.9 195 44.6
TPR.G8816 Trifolium pratense HOM05D004490 ORTHO05D005353 2.2e-33 147.5 200 45.5
Actinidia29417 Actinidia chinensis HOM05D004490 ORTHO05D005353 4.9e-33 146.4 195 44.1
Medtr1g096410 Medicago truncatula HOM05D004490 ORTHO05D005353 4.9e-33 146.4 195 45.1
Sopen11g009650 Solanum pennellii HOM05D004490 ORTHO05D005353 4.9e-33 146.4 235 40.4
Psat6g187400 Pisum sativum HOM05D004490 ORTHO05D005353 6.4e-33 146.0 195 46.2
AL2G20400 Arabidopsis lyrata HOM05D004490 ORTHO05D005353 8.4e-33 145.6 188 48.4
AT1G65280 Arabidopsis thaliana HOM05D004490 ORTHO05D005353 2.4e-32 144.1 188 48.4
Carub.0002s1095 Capsella rubella HOM05D004490 ORTHO05D005353 3.2e-32 143.7 191 47.1
Nitab4.5_0002074g0010 Nicotiana tabacum HOM05D004490 ORTHO05D005353 7.1e-32 142.5 235 39.1
ClCG09G010540 Citrullus lanatus HOM05D004490 ORTHO05D005353 9.2e-32 142.1 195 45.1
Prupe.8G058000 Prunus persica HOM05D004490 ORTHO05D005353 9.2e-32 142.1 195 46.7
PGR102G0893 Punica granatum HOM05D004490 ORTHO05D005353 1.2e-31 141.7 200 44.5
Hund27085 Selenicereus undatus HOM05D004490 ORTHO05D005353 2.1e-31 141.0 186 48.9
CAN.G905.35 Capsicum annuum HOM05D004490 ORTHO05D005353 2.7e-31 140.6 226 38.5
Peaxi162Scf00848g00115 Petunia axillaris HOM05D004490 ORTHO05D005353 3.5e-31 140.2 193 44.6
MSTRG.1522 Avicennia marina HOM05D004490 ORTHO05D005353 4.6e-31 139.8 192 44.3
Sc23g0001210 Simmondsia chinensis HOM05D004490 ORTHO05D005353 6.0e-31 139.4 228 43.0
CANSAT64G2929 Cannabis sativa HOM05D004490 ORTHO05D005353 7.8e-31 139.0 195 44.1
Cpa.g.sc66.45 Carica papaya HOM05D004490 ORTHO05D005353 7.8e-31 139.0 139 54.7
MD04G1003500 Malus domestica HOM05D004490 ORTHO05D005353 7.8e-31 139.0 215 44.7
SalBow4G3000 Salvia bowleyana HOM05D004490 ORTHO05D005353 7.8e-31 139.0 194 44.8
SalBow7G0993 Salvia bowleyana HOM05D004490 ORTHO05D005353 7.8e-31 139.0 194 44.8
Oeu039613.1 Olea europaea HOM05D004490 ORTHO05D005353 1.7e-30 137.9 207 43.0
Migut.C01248 Erythranthe guttata HOM05D004490 ORTHO05D005353 2.3e-30 137.5 192 46.4
SGA_v2.0_scaffold118G32473 Striga asiatica HOM05D004490 ORTHO05D005353 3.0e-30 137.1 189 45.5
Aqoxy2G03181 Aquilegia oxysepala HOM05D004490 ORTHO05D005353 3.9e-30 136.7 202 43.1
A09p29500 Brassica napus HOM05D004490 ORTHO05D005353 3.9e-30 136.7 204 44.6
Sp6g08010 Schrenkiella parvula HOM05D004490 ORTHO05D005353 3.9e-30 136.7 202 46.0
Eucgr.F04124 Eucalyptus grandis HOM05D004490 ORTHO05D005353 5.1e-30 136.3 191 47.6
EL10Ac1g00080 Beta vulgaris HOM05D004490 ORTHO05D005353 8.7e-30 135.6 192 44.3
FvH4_4g06470 Fragaria vesca HOM05D004490 ORTHO05D005353 8.7e-30 135.6 210 43.8
RcHm_v2.0_Chr4g0398261 Rosa chinensis HOM05D004490 ORTHO05D005353 8.7e-30 135.6 201 45.3
FAN12G1529 Fragaria x ananassa HOM05D004490 ORTHO05D005353 1.5e-29 134.8 201 43.8
BraA09t38516Z Brassica rapa HOM05D004490 ORTHO05D005353 3.3e-29 133.7 186 47.3
Lj7A289G25 Lonicera japonica HOM05D004490 ORTHO05D005353 3.3e-29 133.7 210 43.3
MELO3C024104.2 Cucumis melo HOM05D004490 ORTHO05D005353 5.6e-29 132.9 195 40.5
Oeu021013.3 Olea europaea HOM05D004490 ORTHO05D005353 5.6e-29 132.9 232 40.5
Thhalv10028527m.g Eutrema salsugineum HOM05D004490 ORTHO05D005353 7.3e-29 132.5 202 44.6
CARHR056930 Cardamine hirsuta HOM05D004490 ORTHO05D005353 9.6e-29 132.1 209 43.5
BcaB01g01408 Brassica carinata HOM05D004490 ORTHO05D005353 1.3e-28 131.7 201 45.3
BcaC04g20957 Brassica carinata HOM05D004490 ORTHO05D005353 1.3e-28 131.7 192 44.3
BolC9t56586H Brassica oleracea HOM05D004490 ORTHO05D005353 1.3e-28 131.7 192 44.3
Sed0010515 Sechium edule HOM05D004490 ORTHO05D005353 1.3e-28 131.7 207 42.5
Aa31LG9G14890 Aethionema arabicum HOM05D004490 ORTHO05D005353 2.1e-28 131.0 197 44.2
THA.LOC104816311 Tarenaya hassleriana HOM05D004490 ORTHO05D005353 2.1e-28 131.0 204 41.2
FAN07G2233 Fragaria x ananassa HOM05D004490 ORTHO05D005353 4.8e-28 129.8 196 43.9
CsaV3_7G024020 Cucumis sativus L. HOM05D004490 ORTHO05D005353 6.2e-28 129.4 195 39.0
Nn5g27710 Nelumbo nucifera HOM05D004490 ORTHO05D005353 6.2e-28 129.4 191 45.0
Cc10_g11460 Coffea canephora HOM05D004490 ORTHO05D005353 8.1e-28 129.0 189 41.8
FAN17G1649 Fragaria x ananassa HOM05D004490 ORTHO05D005353 1.1e-27 128.6 211 41.7
Lsat_1_v5_gn_5_105541 Lactuca sativa HOM05D004490 ORTHO05D005353 3.1e-27 127.1 220 39.5
ECA234G1973 Erigeron canadensis HOM05D004490 ORTHO05D005353 9.0e-27 125.6 203 40.9
HanXRQChr10g0290501 Helianthus annuus HOM05D004490 ORTHO05D005353 2.0e-26 124.4 202 42.1
Nitab4.5_0018466g0010 Nicotiana tabacum HOM05D004490 ORTHO05D005353 2.0e-26 124.4 142 47.9
PSO063G0599 Papaver somniferum HOM05D004490 ORTHO05D005353 2.0e-26 124.4 192 43.8
Rhsim11G0059700 Rhododendron simsii HOM05D004490 ORTHO05D005353 3.4e-26 123.6 206 39.3
PSO017G7136 Papaver somniferum HOM05D004490 ORTHO05D005353 5.8e-26 122.9 196 42.9
DCAR_014360 Daucus carota HOM05D004490 ORTHO05D005353 7.6e-26 122.5 201 40.8
Os01g0521500 Oryza sativa ssp. japonica HOM05D004490 ORTHO05D005353 2.7e-23 114.0 209 34.4
AUR62022689 Chenopodium quinoa HOM05D004490 ORTHO05D005353 5.1e-22 109.8 165 43.6
HPP92_020178 Vanilla planifolia HOM05D004490 ORTHO05D005353 8.7e-22 109.0 209 34.9
Zm00001eb427930 Zea mays HOM05D004490 ORTHO05D005353 8.7e-22 109.0 201 33.8
AUR62004649 Chenopodium quinoa HOM05D004490 ORTHO05D005353 5.6e-21 106.3 165 42.4
HPP92_020159 Vanilla planifolia HOM05D004490 ORTHO05D005353 7.3e-21 105.9 205 34.6
FvH4_3g44966 Fragaria vesca HOM05D004490 ORTHO05D005353 9.6e-21 105.5 200 37.0
Ah.05g178090 Amaranthus hybridus HOM05D004490 ORTHO05D005353 3.6e-20 103.6 164 42.7
BNapus_Darmor_BZH_scaffold_278p00030 Brassica napus HOM05D004490 ORTHO05D005353 1.1e-19 102.1 86 60.5
CDE08G1471 Ceratophyllum demersum HOM05D004490 ORTHO05D005353 1.1e-19 102.1 194 34.5
FAN11G3016 Fragaria x ananassa HOM05D004490 ORTHO05D005353 5.3e-19 99.8 177 40.1
FAN25G1655 Fragaria x ananassa HOM05D004490 ORTHO05D005353 3.8e-17 93.6 183 37.2
RcHm_v2.0_Chr5g0081671 Rosa chinensis HOM05D004490 ORTHO05D005353 1.1e-16 92.0 201 34.3
SHI09001 Sapria himalayana HOM05D004490 ORTHO05D005353 1.9e-16 91.3 73 61.6
Mapoly0003s0077 Marchantia polymorpha HOM05D004490 ORTHO05D005353 4.2e-16 90.1 200 36.0
FvH4_3g44892 Fragaria vesca HOM05D004490 ORTHO05D005353 7.1e-16 89.4 177 37.9
SEGI_26294 Sequoiadendron giganteum HOM05D004490 ORTHO05D005353 7.1e-16 89.4 243 30.9
ATR1098G081 Amborella trichopoda HOM05D004490 ORTHO05D008312 1.0e-14 85.5 203 36.5
FAN11G3432 Fragaria x ananassa HOM05D004490 ORTHO05D005353 1.3e-14 85.1 80 52.5
Cc00_g05790 Coffea canephora HOM05D004490 ORTHO05D005353 8.7e-14 82.4 88 46.6
FAN21G1156 Fragaria x ananassa HOM05D004490 ORTHO05D005353 1.5e-13 81.6 88 47.7
CiPaw.09G174900 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.5e-13 80.9 132 40.9
Pp3c14_7350 Physcomitrium patens HOM05D004490 ORTHO05D005353 9.6e-13 79.0 278 27.3
CDE02G2953 Ceratophyllum demersum HOM05D004490 ORTHO05D005353 2.8e-12 77.4 80 46.2
Sabra13G0096100 Salix brachista HOM05D004490 ORTHO05D005353 2.4e-11 74.3 105 39.0
RcHm_v2.0_Chr5g0082701 Rosa chinensis HOM05D004490 ORTHO05D005353 1.0e-09 68.9 60 51.7
RcHm_v2.0_Chr5g0082081 Rosa chinensis HOM05D004490 ORTHO05D005353 2.9e-09 67.4 148 34.5
FvH4_3g44931 Fragaria vesca HOM05D004490 ORTHO05D005353 4.2e-08 63.5 56 53.6
CiPaw.03G181800 Carya illinoinensis HOM05D001576 ORTHO05D000401 9.3e-08 62.4 136 33.8
unitig_699.g19825 Utricularia gibba HOM05D004490 ORTHO05D005353 9.3e-08 62.4 180 29.4
CiPaw.04G121900 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.6e-07 60.1 143 32.2
CiPaw.05G126800 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.9e-06 57.0 136 30.9
CiPaw.15G155400 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.9e-06 57.0 139 29.5
Rhsim07G0156400 Rhododendron simsii HOM05D001576 ORTHO05D000401 8.7e-06 55.8 123 26.0


User provided reference genes

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