Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.15G078400 Carya illinoinensis HOM05D007221 ORTHO05D009204 4.3e-136 488.0 252 100.0
QL02p008631 Quercus lobata HOM05D007221 ORTHO05D009204 4.8e-87 325.1 246 73.6
Haze_17964 Corylus avellana HOM05D007221 ORTHO05D009204 1.6e-79 300.1 203 80.8
Ciclev10002305m.g Citrus clementina HOM05D007221 ORTHO05D009204 3.8e-76 288.9 255 65.5
TAR625G0916 Trochodendron aralioides HOM05D007221 ORTHO05D009204 7.2e-75 284.6 230 67.8
CANSAT25G0501 Cannabis sativa HOM05D007221 ORTHO05D009204 6.7e-73 278.1 224 67.0
Potri.014G196800 Populus trichocarpa HOM05D007221 ORTHO05D009204 4.3e-72 275.4 232 66.4
Prupe.1G379100 Prunus persica HOM05D007221 ORTHO05D009204 4.3e-72 275.4 257 61.9
Gohir.A01G115700 Gossypium hirsutum HOM05D007221 ORTHO05D009204 7.4e-72 274.6 233 67.0
Lj4A39T64 Lonicera japonica HOM05D007221 ORTHO05D009204 9.7e-72 274.2 223 68.2
Gohir.D01G104000 Gossypium hirsutum HOM05D007221 ORTHO05D009204 3.7e-71 272.3 252 63.9
PGR031G1076 Punica granatum HOM05D007221 ORTHO05D009204 4.8e-71 271.9 224 68.8
Sabra14G0145300 Salix brachista HOM05D007221 ORTHO05D009204 4.8e-71 271.9 248 62.5
GSVIVG01009712001 Vitis vinifera HOM05D007221 ORTHO05D009204 1.8e-70 270.0 225 67.1
Gorai.002G127900 Gossypium raimondii HOM05D007221 ORTHO05D009204 5.3e-70 268.5 261 62.5
MD08G1031600 Malus domestica HOM05D007221 ORTHO05D009204 6.9e-70 268.1 229 64.6
Eucgr.F01893 Eucalyptus grandis HOM05D007221 ORTHO05D009204 1.2e-69 267.3 250 62.8
Dinv36085 Davidia involucrata HOM05D007221 ORTHO05D009204 1.5e-69 266.9 230 66.1
Ca_15515_v3 Cicer arietinum L. HOM05D007221 ORTHO05D009204 2.0e-69 266.5 227 63.9
COL.COLO4_26312 Corchorus olitorius HOM05D007221 ORTHO05D009204 7.7e-69 264.6 237 64.1
MD15G1027300 Malus domestica HOM05D007221 ORTHO05D009204 7.7e-69 264.6 257 59.9
Hma1.2p1_0203F.1_g086350 Hydrangea macrophylla HOM05D007221 ORTHO05D009204 3.8e-68 262.3 244 62.7
Thecc.08G027100 Theobroma cacao HOM05D007221 ORTHO05D009204 3.8e-68 262.3 241 63.5
Psat5g017120 Pisum sativum HOM05D007221 ORTHO05D009204 1.4e-67 260.4 242 59.1
TPR.G12470 Trifolium pratense HOM05D007221 ORTHO05D009204 1.4e-67 260.4 231 61.9
VMungo1309G3139 Vigna mungo HOM05D007221 ORTHO05D009204 1.9e-67 260.0 193 69.4
Actinidia38006 Actinidia chinensis HOM05D007221 ORTHO05D009204 2.5e-67 259.6 241 64.3
Medtr3g111850 Medicago truncatula HOM05D007221 ORTHO05D009204 3.2e-67 259.2 223 63.2
Rhsim07G0239500 Rhododendron simsii HOM05D007221 ORTHO05D009204 3.2e-67 259.2 240 57.9
CsaV3_2G028730 Cucumis sativus L. HOM05D007221 ORTHO05D009204 7.2e-67 258.1 227 63.0
Phvul.009G057900 Phaseolus vulgaris HOM05D007221 ORTHO05D009204 1.2e-66 257.3 197 68.5
RcHm_v2.0_Chr6g0301081 Rosa chinensis HOM05D007221 ORTHO05D009204 1.2e-66 257.3 230 63.9
Aqoxy6G01112 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 1.6e-66 256.9 227 61.7
arahy.Tifrunner.gnm1.ann1.50YYNM Arachis hypogaea HOM05D007221 ORTHO05D009204 2.1e-66 256.5 250 59.6
arahy.Tifrunner.gnm1.ann1.647QNX Arachis hypogaea HOM05D007221 ORTHO05D009204 2.1e-66 256.5 250 59.6
Lj1g0002842 Lotus japonicus HOM05D007221 ORTHO05D009204 2.7e-66 256.1 232 62.5
Lalb_Chr11g0062321 Lupinus albus HOM05D007221 ORTHO05D009204 2.7e-66 256.1 241 58.9
MELO3C010945.2 Cucumis melo HOM05D007221 ORTHO05D009204 6.1e-66 255.0 219 64.8
PSO675G7833 Papaver somniferum HOM05D007221 ORTHO05D009204 6.1e-66 255.0 224 64.7
Nitab4.5_0006280g0040 Nicotiana tabacum HOM05D007221 ORTHO05D009204 3.9e-65 252.3 224 62.1
THA.LOC104812558 Tarenaya hassleriana HOM05D007221 ORTHO05D009204 3.9e-65 252.3 219 62.1
Nitab4.5_0010510g0010 Nicotiana tabacum HOM05D007221 ORTHO05D009204 1.1e-64 250.8 224 61.6
Manes.05G159500 Manihot esculenta HOM05D007221 ORTHO05D009204 2.6e-64 249.6 207 69.1
FvH4_2g39780 Fragaria vesca HOM05D007221 ORTHO05D009204 3.3e-64 249.2 229 61.1
Atru.chr13.477 Acer truncatum HOM05D007221 ORTHO05D009204 1.3e-63 247.3 201 66.2
Sed0005529 Sechium edule HOM05D007221 ORTHO05D009204 2.2e-63 246.5 227 63.0
CAN.G1226.17 Capsicum annuum HOM05D007221 ORTHO05D009204 2.8e-63 246.1 215 62.3
Cc10_g02840 Coffea canephora HOM05D007221 ORTHO05D009204 2.8e-63 246.1 232 61.2
Solyc04g080390.4 Solanum lycopersicum HOM05D007221 ORTHO05D009204 3.7e-63 245.7 206 64.6
PGSC0003DMG400003731 Solanum tuberosum HOM05D007221 ORTHO05D009204 4.8e-63 245.4 218 63.3
Sopen04g033980 Solanum pennellii HOM05D007221 ORTHO05D009204 8.2e-63 244.6 218 61.5
Glyma.04G031900 Glycine max HOM05D007221 ORTHO05D009204 1.8e-62 243.4 199 66.8
HanXRQChr16g0508501 Helianthus annuus HOM05D007221 ORTHO05D009204 4.1e-62 242.3 235 59.6
Sc02g0006170 Simmondsia chinensis HOM05D007221 ORTHO05D009204 5.3e-62 241.9 236 58.1
Aa31LG9G12820 Aethionema arabicum HOM05D007221 ORTHO05D009204 7.0e-62 241.5 195 64.1
ClCG08G015050 Citrullus lanatus HOM05D007221 ORTHO05D009204 9.1e-62 241.1 206 65.5
AUR62039548 Chenopodium quinoa HOM05D007221 ORTHO05D009204 7.7e-61 238.0 228 56.6
AUR62035445 Chenopodium quinoa HOM05D007221 ORTHO05D009204 2.2e-60 236.5 219 58.4
Thhalv10003376m.g Eutrema salsugineum HOM05D007221 ORTHO05D009204 2.2e-60 236.5 194 62.4
SGA_v2.0_scaffold111G31495 Striga asiatica HOM05D007221 ORTHO05D009204 2.9e-60 236.1 220 60.9
Migut.C00733 Erythranthe guttata HOM05D007221 ORTHO05D009204 3.8e-60 235.7 236 58.9
Sp2g07400 Schrenkiella parvula HOM05D007221 ORTHO05D009204 2.5e-59 233.0 206 59.7
Peaxi162Scf00417g01337 Petunia axillaris HOM05D007221 ORTHO05D009204 5.5e-59 231.9 163 71.2
Carub.0008s0617 Capsella rubella HOM05D007221 ORTHO05D009204 7.2e-59 231.5 214 58.4
BcaC04g21975 Brassica carinata HOM05D007221 ORTHO05D009204 9.4e-59 231.1 194 61.9
BolC9t55425H Brassica oleracea HOM05D007221 ORTHO05D009204 9.4e-59 231.1 194 61.9
MBI16_g31006_MAGBIO Magnolia biondii HOM05D007221 ORTHO05D009204 9.4e-59 231.1 207 59.4
BraA09t37604Z Brassica rapa HOM05D007221 ORTHO05D009204 1.2e-58 230.7 194 61.3
CARHR181710 Cardamine hirsuta HOM05D007221 ORTHO05D009204 1.2e-58 230.7 195 61.0
A09p19950 Brassica napus HOM05D007221 ORTHO05D009204 3.6e-58 229.2 194 61.3
C09p25270 Brassica napus HOM05D007221 ORTHO05D009204 4.7e-58 228.8 194 61.9
AT5G42765 Arabidopsis thaliana HOM05D007221 ORTHO05D009204 6.1e-58 228.4 197 62.4
BcaB07g31048 Brassica carinata HOM05D007221 ORTHO05D009204 8.0e-58 228.0 194 59.8
AL8G18350 Arabidopsis lyrata HOM05D007221 ORTHO05D009204 2.3e-57 226.5 206 60.2
CSS0008817 Camellia sinensis var. sinensis HOM05D007221 ORTHO05D009204 5.2e-57 225.3 169 69.8
ECA232G4972 Erigeron canadensis HOM05D007221 ORTHO05D009204 5.2e-57 225.3 187 61.5
Nn1g04985 Nelumbo nucifera HOM05D007221 ORTHO05D009204 2.2e-55 219.9 208 63.0
Lsat_1_v5_gn_4_119280 Lactuca sativa HOM05D007221 ORTHO05D009204 4.8e-55 218.8 229 56.3
vmacro04529 Vaccinium macrocarpon HOM05D007221 ORTHO05D009204 1.8e-54 216.9 283 51.2
Oeu063754.1 Olea europaea HOM05D007221 ORTHO05D009204 1.1e-51 207.6 179 63.1
SalBow7G4300 Salvia bowleyana HOM05D007221 ORTHO05D009204 1.1e-51 207.6 220 55.9
EL10Ac1g01796 Beta vulgaris HOM05D007221 ORTHO05D009204 2.0e-48 196.8 226 50.4
HPP92_018787 Vanilla planifolia HOM05D007221 ORTHO05D009204 4.8e-47 192.2 203 54.2
HPP92_018805 Vanilla planifolia HOM05D007221 ORTHO05D009204 1.1e-46 191.0 199 54.3
PSO541G5695 Papaver somniferum HOM05D007221 ORTHO05D009204 2.0e-45 186.8 171 63.7
Glyma.06G032000 Glycine max HOM05D007221 ORTHO05D009204 2.1e-42 176.8 120 74.2
FAN27G1052 Fragaria x ananassa HOM05D007221 ORTHO05D009204 2.7e-42 176.4 228 49.1
Pp3c15_4620 Physcomitrium patens HOM05D007221 ORTHO05D009204 2.3e-41 173.3 197 51.3
FAN20G2979 Fragaria x ananassa HOM05D007221 ORTHO05D009204 5.2e-41 172.2 227 48.5
Os03g0774400 Oryza sativa ssp. japonica HOM05D007221 ORTHO05D009204 5.2e-41 172.2 197 49.7
Hund26574 Selenicereus undatus HOM05D007221 ORTHO05D009204 3.4e-40 169.5 228 49.6
Zm00001eb059140 Zea mays HOM05D007221 ORTHO05D009204 7.5e-40 168.3 207 46.4
Mapoly0024s0117 Marchantia polymorpha HOM05D007221 ORTHO05D009204 2.3e-36 156.8 192 46.9
AagrBONN_evm.TU.Sc2ySwM_368.2172 Anthoceros agrestis HOM05D007221 ORTHO05D009204 1.9e-35 153.7 170 45.3
Ah.05g167430 Amaranthus hybridus HOM05D007221 ORTHO05D009204 1.6e-34 150.6 192 48.4
SMO356G0611 Selaginella moellendorffii HOM05D007221 ORTHO05D009204 5.2e-33 145.6 169 47.9
HPP92_018706 Vanilla planifolia HOM05D007221 ORTHO05D009204 2.6e-32 143.3 134 58.2
unitig_26.g9834 Utricularia gibba HOM05D007221 ORTHO05D009204 4.4e-32 142.5 100 70.0
Duzib093G2110 Durio zibethinus HOM05D007221 ORTHO05D009204 9.5e-27 124.8 91 70.3
FAN15G0707 Fragaria x ananassa HOM05D007221 ORTHO05D009204 3.6e-26 122.9 89 70.8
Manes.18G026801 Manihot esculenta HOM05D007221 ORTHO05D009204 1.2e-21 107.8 111 54.1
SEGI_36647 Sequoiadendron giganteum HOM05D007221 ORTHO05D009204 3.5e-21 106.3 118 48.3
CBR_g36819 Chara braunii HOM05D007221 ORTHO05D009204 1.1e-19 101.3 219 32.9
RcHm_v2.0_Chr1g0350071 Rosa chinensis HOM05D007221 ORTHO05D009204 1.1e-19 101.3 108 53.7
Aqoxy71s002 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 2.1e-10 70.5 53 64.2
Dinv39425 Davidia involucrata HOM05D002064 ORTHO05D002118 9.9e-08 61.6 45 66.7
Ah.05g167420 Amaranthus hybridus HOM05D007221 ORTHO05D009204 3.2e-06 56.6 42 64.3
SGA_v2.0_scaffold54G19517 Striga asiatica HOM05D007221 ORTHO05D009204 3.2e-06 56.6 95 41.1


User provided reference genes

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