Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.15G078300 Carya illinoinensis HOM05D006598 ORTHO05D008132 9.3e-195 683.3 338 100.0
Cfa018154 Carpinus fangiana HOM05D006598 ORTHO05D008132 1.6e-167 592.8 337 86.4
QL02p008626 Quercus lobata HOM05D006598 ORTHO05D008132 8.2e-167 590.5 336 86.6
Haze_17965 Corylus avellana HOM05D006598 ORTHO05D008132 1.2e-165 586.6 338 86.4
Prupe.1G379200 Prunus persica HOM05D006598 ORTHO05D008132 6.3e-159 564.3 335 80.9
Dinv36084 Davidia involucrata HOM05D006598 ORTHO05D008132 3.1e-158 562.0 333 80.8
Atru.chr13.478 Acer truncatum HOM05D006598 ORTHO05D008132 1.0e-156 557.0 335 79.7
Dinv39426 Davidia involucrata HOM05D006598 ORTHO05D008132 3.8e-156 555.1 335 80.9
FvH4_2g39790 Fragaria vesca HOM05D006598 ORTHO05D008132 3.2e-155 552.0 335 77.6
FAN15G1256 Fragaria x ananassa HOM05D006598 ORTHO05D008132 2.7e-154 548.9 335 77.0
FAN20G2142 Fragaria x ananassa HOM05D006598 ORTHO05D008132 3.6e-154 548.5 335 77.0
FAN27G1472 Fragaria x ananassa HOM05D006598 ORTHO05D008132 7.9e-154 547.4 335 76.7
CSS0023084 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.0e-153 547.0 335 78.5
Potri.002G260300 Populus trichocarpa HOM05D006598 ORTHO05D008132 9.7e-152 540.4 334 79.0
GSVIVG01009711001 Vitis vinifera HOM05D006598 ORTHO05D008132 5.9e-149 531.2 331 77.3
TAR625G1490 Trochodendron aralioides HOM05D006598 ORTHO05D008132 2.9e-148 528.9 335 77.3
Ciclev10001322m.g Citrus clementina HOM05D006598 ORTHO05D008132 1.5e-147 526.6 334 76.0
Phvul.009G057800 Phaseolus vulgaris HOM05D006598 ORTHO05D008132 1.5e-147 526.6 335 74.9
VMungo1309G1899 Vigna mungo HOM05D006598 ORTHO05D008132 2.5e-147 525.8 335 74.9
Sabra02G0198100 Salix brachista HOM05D006598 ORTHO05D008132 4.2e-147 525.0 334 77.2
CSS0013932 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 5.5e-147 524.6 326 77.3
Lj4A39T66 Lonicera japonica HOM05D006598 ORTHO05D008132 2.7e-146 522.3 335 75.5
CANSAT25G2965 Cannabis sativa HOM05D006598 ORTHO05D008132 3.6e-146 521.9 337 74.5
Actinidia38007 Actinidia chinensis HOM05D006598 ORTHO05D008132 4.7e-146 521.5 332 75.9
Medtr3g111840 Medicago truncatula HOM05D006598 ORTHO05D008132 4.7e-146 521.5 334 74.3
Glyma.04G032000 Glycine max HOM05D006598 ORTHO05D008132 1.0e-145 520.4 336 75.0
Cpa.g.sc36.79 Carica papaya HOM05D006598 ORTHO05D008132 1.4e-145 520.0 335 75.2
Actinidia15332 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.8e-145 519.6 334 75.4
Duzib116G0116 Durio zibethinus HOM05D006598 ORTHO05D008132 2.0e-144 516.2 334 77.2
PSO541G3348 Papaver somniferum HOM05D006598 ORTHO05D008132 3.7e-143 511.9 335 73.7
Manes.18G026900 Manihot esculenta HOM05D006598 ORTHO05D008132 3.1e-142 508.8 333 74.2
Rhsim07G0239600 Rhododendron simsii HOM05D006598 ORTHO05D008132 5.3e-142 508.1 321 75.7
Ca_15516_v3 Cicer arietinum L. HOM05D006598 ORTHO05D008132 7.0e-142 507.7 329 73.3
COL.COLO4_26313 Corchorus olitorius HOM05D006598 ORTHO05D008132 7.0e-142 507.7 332 77.1
MBI16_g31005_MAGBIO Magnolia biondii HOM05D006598 ORTHO05D008132 7.0e-142 507.7 337 74.2
Glyma.06G032100 Glycine max HOM05D006598 ORTHO05D008132 9.1e-142 507.3 336 73.8
TPR.G12344 Trifolium pratense HOM05D006598 ORTHO05D008132 5.9e-141 504.6 334 71.9
vmacro21641 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 5.9e-141 504.6 336 73.8
Psat5g017160 Pisum sativum HOM05D006598 ORTHO05D008132 1.0e-140 503.8 334 72.5
arahy.Tifrunner.gnm1.ann1.KF7WGB Arachis hypogaea HOM05D006598 ORTHO05D008132 2.9e-140 502.3 328 73.8
arahy.Tifrunner.gnm1.ann1.9Y7K4V Arachis hypogaea HOM05D006598 ORTHO05D008132 3.8e-140 501.9 328 73.8
Aqoxy6G01111 Aquilegia oxysepala HOM05D006598 ORTHO05D008132 5.0e-140 501.5 320 76.2
PSO675G7094 Papaver somniferum HOM05D006598 ORTHO05D008132 2.5e-139 499.2 331 73.1
Sed0027447 Sechium edule HOM05D006598 ORTHO05D008132 9.4e-139 497.3 324 73.5
vmacro04528 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 9.4e-139 497.3 320 74.7
Cc10_g02850 Coffea canephora HOM05D006598 ORTHO05D008132 1.4e-137 493.4 336 70.8
Sc02g0006160 Simmondsia chinensis HOM05D006598 ORTHO05D008132 8.8e-137 490.7 330 72.1
ECA232G3558 Erigeron canadensis HOM05D006598 ORTHO05D008132 1.2e-136 490.3 332 71.1
Lj1g0003551 Lotus japonicus HOM05D006598 ORTHO05D008132 3.4e-136 488.8 334 71.6
TAR628G1208 Trochodendron aralioides HOM05D006598 ORTHO05D008132 5.7e-136 488.0 307 76.9
MSTRG.25174 Avicennia marina HOM05D006598 ORTHO05D008132 9.8e-136 487.3 333 70.9
Eucgr.F01894 Eucalyptus grandis HOM05D006598 ORTHO05D008132 1.7e-135 486.5 332 72.9
Lalb_Chr11g0062331 Lupinus albus HOM05D006598 ORTHO05D008132 2.2e-135 486.1 333 71.5
PGSC0003DMG400003679 Solanum tuberosum HOM05D006598 ORTHO05D008132 8.3e-135 484.2 337 70.6
Rhsim06G0033600 Rhododendron simsii HOM05D006598 ORTHO05D008132 1.8e-134 483.0 318 73.3
SalBow7G0748 Salvia bowleyana HOM05D006598 ORTHO05D008132 5.4e-134 481.5 329 70.8
Migut.C00732 Erythranthe guttata HOM05D006598 ORTHO05D008132 2.0e-133 479.6 335 69.0
CAN.G1226.16 Capsicum annuum HOM05D006598 ORTHO05D008132 3.5e-133 478.8 337 69.4
THA.LOC104806941 Tarenaya hassleriana HOM05D006598 ORTHO05D008132 4.5e-133 478.4 326 72.1
TWI36G0987 Tripterygium wilfordii HOM05D006598 ORTHO05D008132 1.0e-132 477.2 336 71.1
Solyc04g080380.3 Solanum lycopersicum HOM05D006598 ORTHO05D008132 1.7e-132 476.5 337 70.0
Sopen04g033970 Solanum pennellii HOM05D006598 ORTHO05D008132 3.8e-132 475.3 337 70.0
Nitab4.5_0010510g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 5.0e-132 474.9 337 70.9
Nitab4.5_0006280g0060 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.9e-131 473.0 337 70.9
Thecc.08G027000 Theobroma cacao HOM05D006598 ORTHO05D008132 3.2e-131 472.2 334 73.1
Lsat_1_v5_gn_4_119301 Lactuca sativa HOM05D006598 ORTHO05D008132 4.2e-131 471.9 328 70.4
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 2.7e-130 469.2 336 69.3
AL8G18360 Arabidopsis lyrata HOM05D006598 ORTHO05D008132 1.4e-129 466.8 341 67.4
Aa31LG9G12810 Aethionema arabicum HOM05D006598 ORTHO05D008132 2.3e-129 466.1 342 67.5
Thhalv10003240m.g Eutrema salsugineum HOM05D006598 ORTHO05D008132 3.0e-129 465.7 322 70.8
CARHR181720 Cardamine hirsuta HOM05D006598 ORTHO05D008132 5.2e-129 464.9 323 70.6
BcaC02g10811 Brassica carinata HOM05D006598 ORTHO05D008132 2.6e-128 462.6 322 69.9
C04p24910 Brassica napus HOM05D006598 ORTHO05D008132 2.6e-128 462.6 322 69.9
BolC4t23991H Brassica oleracea HOM05D006598 ORTHO05D008132 2.6e-128 462.6 322 69.9
A06p48250 Brassica napus HOM05D006598 ORTHO05D008132 4.4e-128 461.8 322 70.2
BraA06t27693Z Brassica rapa HOM05D006598 ORTHO05D008132 4.4e-128 461.8 322 70.2
BcaC06g31749 Brassica carinata HOM05D006598 ORTHO05D008132 9.8e-128 460.7 322 69.6
Hund26575 Selenicereus undatus HOM05D006598 ORTHO05D008132 9.8e-128 460.7 332 66.6
Carub.0008s0618 Capsella rubella HOM05D006598 ORTHO05D008132 2.2e-127 459.5 336 66.7
Sp2g07390 Schrenkiella parvula HOM05D006598 ORTHO05D008132 4.9e-127 458.4 351 65.5
AT5G42760 Arabidopsis thaliana HOM05D006598 ORTHO05D008132 5.0e-124 448.4 336 66.4
AUR62035446 Chenopodium quinoa HOM05D006598 ORTHO05D008132 1.6e-122 443.4 323 67.8
Ah.11g043150 Amaranthus hybridus HOM05D006598 ORTHO05D008132 3.6e-122 442.2 332 65.4
HPP92_018806 Vanilla planifolia HOM05D006598 ORTHO05D008132 8.0e-122 441.0 333 64.3
CDE04G2166 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 1.0e-121 440.7 337 65.6
SGA_v2.0_scaffold54G19518 Striga asiatica HOM05D006598 ORTHO05D008132 5.7e-120 434.9 320 66.6
ATR0810G155 Amborella trichopoda HOM05D006598 ORTHO05D008132 4.6e-117 425.2 316 65.2
Oeu049953.1 Olea europaea HOM05D006598 ORTHO05D008132 2.0e-112 409.8 336 62.5
Nitab4.5_0005730g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 3.2e-110 402.5 338 61.8
Os03g0775000 Oryza sativa ssp. japonica HOM05D006598 ORTHO05D008132 2.7e-101 372.9 308 60.4
Zm00001eb059150 Zea mays HOM05D006598 ORTHO05D008132 1.1e-99 367.5 314 57.3
CDE06G0448 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 2.5e-99 366.3 295 64.7
SEGI_39292 Sequoiadendron giganteum HOM05D006598 ORTHO05D008132 1.4e-97 360.5 318 58.2
TAR381G1379 Trochodendron aralioides HOM05D006598 ORTHO05D008132 2.1e-93 346.7 207 81.2
AagrBONN_evm.TU.Sc2ySwM_228.3129 Anthoceros agrestis HOM05D006598 ORTHO05D008132 8.1e-82 308.1 318 50.0
Nn5g29606 Nelumbo nucifera HOM05D006598 ORTHO05D008132 1.8e-81 307.0 215 73.0
HPP92_018704 Vanilla planifolia HOM05D006598 ORTHO05D008132 3.1e-81 306.2 258 60.1
Pp3c8_2950 Physcomitrium patens HOM05D006598 ORTHO05D008132 1.3e-79 300.8 309 51.5
Pp3c4_6590 Physcomitrium patens HOM05D006598 ORTHO05D008132 4.9e-79 298.9 305 51.1
Nitab4.5_0001091g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.4e-78 297.4 203 71.4
CSS0023478 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 4.9e-71 272.3 161 81.4
HanXRQChr16g0508491 Helianthus annuus HOM05D006598 ORTHO05D008132 1.8e-68 263.8 203 64.0
unitig_46.g17936 Utricularia gibba HOM05D006598 ORTHO05D008132 1.5e-64 250.8 178 66.3
FAN20G3016 Fragaria x ananassa HOM05D006598 ORTHO05D008132 7.6e-64 248.4 134 84.3
HPP92_018786 Vanilla planifolia HOM05D006598 ORTHO05D008132 3.2e-62 243.0 163 69.3
AUR62039547 Chenopodium quinoa HOM05D006598 ORTHO05D008132 2.8e-58 229.9 256 52.3
Actinidia29823 Actinidia chinensis HOM05D006598 ORTHO05D008132 4.5e-56 222.6 156 70.5
Pp3c12_23400 Physcomitrium patens HOM05D006598 ORTHO05D008132 1.1e-51 208.0 284 44.0
TAR381G0844 Trochodendron aralioides HOM05D006598 ORTHO05D008132 4.5e-48 196.1 130 73.1
HPP92_018785 Vanilla planifolia HOM05D006598 ORTHO05D008132 4.5e-48 196.1 157 61.1
MD15G1027400 Malus domestica HOM05D006598 ORTHO05D008132 5.7e-43 179.1 90 88.9
Actinidia22543 Actinidia chinensis HOM05D006598 ORTHO05D008132 2.8e-42 176.8 144 61.8
Actinidia29824 Actinidia chinensis HOM05D006598 ORTHO05D008132 3.0e-28 130.2 135 51.1
CSS0032599 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.7e-26 124.4 126 50.8
Nitab4.5_0000457g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 2.8e-18 97.1 72 69.4
MCO09G151 Micromonas commoda HOM05D006598 ORTHO05D008132 2.7e-16 90.5 280 32.1
HanXRQChr09g0268921 Helianthus annuus HOM05D006598 ORTHO05D008132 2.8e-13 80.5 70 60.0
CBR_g22328 Chara braunii HOM05D006598 ORTHO05D008132 9.8e-11 72.0 175 30.9
Cre17.g737650 Chlamydomonas reinhardtii HOM05D038115 ORTHO05D008132 2.7e-08 63.9 191 29.8
Cre16.g655900 Chlamydomonas reinhardtii HOM05D006598 ORTHO05D008132 3.3e-06 57.0 252 27.8


User provided reference genes

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