Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.15G076000 Carya illinoinensis HOM05D005945 ORTHO05D006749 0.0e+00 2134.8 1112 100.0
QL02p007988 Quercus lobata HOM05D005945 ORTHO05D006749 9.7e-233 811.2 1118 47.0
Cfa018140 Carpinus fangiana HOM05D005945 ORTHO05D006749 3.7e-224 782.7 1112 47.3
Haze_17984 Corylus avellana HOM05D005945 ORTHO05D006749 1.0e-197 694.9 1111 44.7
Potri.014G181200 Populus trichocarpa HOM05D005945 ORTHO05D006749 1.6e-97 362.1 1071 32.4
Dinv39407 Davidia involucrata HOM05D005945 ORTHO05D006749 2.0e-97 361.7 1133 30.0
Thecc.08G024700 Theobroma cacao HOM05D005945 ORTHO05D006749 9.8e-92 342.8 1125 29.9
Duzib093G2051 Durio zibethinus HOM05D005945 ORTHO05D006749 1.6e-86 325.5 1124 29.2
Prupe.1G381200 Prunus persica HOM05D005945 ORTHO05D006749 3.6e-86 324.3 1122 30.0
Cpa.g.sc64.76 Carica papaya HOM05D005945 ORTHO05D006749 1.1e-82 312.8 1151 29.7
Manes.05G161400 Manihot esculenta HOM05D005945 ORTHO05D006749 1.7e-80 305.4 1057 29.4
Actinidia15315 Actinidia chinensis HOM05D005945 ORTHO05D006749 8.6e-80 303.1 1067 27.9
COL.COLO4_26338 Corchorus olitorius HOM05D005945 ORTHO05D006749 2.5e-79 301.6 1128 28.7
MD15G1030400 Malus domestica HOM05D005945 ORTHO05D006749 2.5e-79 301.6 1018 29.6
Sabra14G0141200 Salix brachista HOM05D005945 ORTHO05D006749 4.4e-76 290.8 1128 29.1
Manes.18G028200 Manihot esculenta HOM05D005945 ORTHO05D006749 9.8e-76 289.7 1065 28.5
CANSAT25G3494 Cannabis sativa HOM05D005945 ORTHO05D006749 1.2e-73 282.7 1128 29.2
CSS0038834 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 2.3e-72 278.5 1071 28.7
CSS0001698 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 5.0e-72 277.3 1071 28.5
MD08G1033800 Malus domestica HOM05D005945 ORTHO05D006749 5.0e-72 277.3 1063 28.7
TAR376G0838 Trochodendron aralioides HOM05D005945 ORTHO05D006749 1.2e-70 272.7 1117 28.3
Gorai.010G010800 Gossypium raimondii HOM05D005945 ORTHO05D006749 1.4e-69 269.2 1108 27.7
TPR.G32532 Trifolium pratense HOM05D005945 ORTHO05D006749 2.0e-68 265.4 1084 28.4
Gohir.D06G008100 Gossypium hirsutum HOM05D005945 ORTHO05D006749 5.8e-68 263.8 1111 27.5
Gohir.A06G010700 Gossypium hirsutum HOM05D005945 ORTHO05D006749 1.4e-66 259.2 1106 27.6
RcHm_v2.0_Chr6g0300761 Rosa chinensis HOM05D005945 ORTHO05D006749 5.4e-66 257.3 1132 27.3
FAN27G1966 Fragaria x ananassa HOM05D005945 ORTHO05D006749 6.4e-59 233.8 1120 27.1
FvH4_2g39990 Fragaria vesca HOM05D005945 ORTHO05D006749 1.4e-58 232.6 1120 27.1
Medtr4g019490 Medicago truncatula HOM05D005945 ORTHO05D006749 1.4e-58 232.6 1132 27.4
FAN15G0837 Fragaria x ananassa HOM05D005945 ORTHO05D006749 2.1e-57 228.8 1121 26.7
FAN20G0334 Fragaria x ananassa HOM05D005945 ORTHO05D006749 4.6e-57 227.6 1120 26.8
GSVIVG01009690001 Vitis vinifera HOM05D005945 ORTHO05D006749 1.1e-53 216.5 311 45.0
arahy.Tifrunner.gnm1.ann1.Q0ZVI3 Arachis hypogaea HOM05D005945 ORTHO05D006749 6.4e-51 207.2 1107 25.7
Rhsim06G0034700 Rhododendron simsii HOM05D005945 ORTHO05D006749 1.9e-50 205.7 1077 26.1
Nn5g29549 Nelumbo nucifera HOM05D005945 ORTHO05D006749 2.4e-50 205.3 1130 25.6
Sed0009733 Sechium edule HOM05D005945 ORTHO05D006749 3.0e-48 198.4 1052 24.5
Nitab4.5_0003783g0040 Nicotiana tabacum HOM05D005945 ORTHO05D006749 6.6e-48 197.2 484 34.9
CsaV3_2G028570 Cucumis sativus L. HOM05D005945 ORTHO05D006749 1.9e-47 195.7 1055 25.3
TAR628G0886 Trochodendron aralioides HOM05D005945 ORTHO05D006749 4.3e-47 194.5 355 40.0
arahy.Tifrunner.gnm1.ann1.01TKSZ Arachis hypogaea HOM05D005945 ORTHO05D006749 3.6e-46 191.4 1139 24.1
Psat7g242000 Pisum sativum HOM05D005945 ORTHO05D006749 4.8e-46 191.0 1130 24.2
Nitab4.5_0000110g0520 Nicotiana tabacum HOM05D005945 ORTHO05D006749 6.2e-46 190.7 711 28.8
MELO3C010931.2 Cucumis melo HOM05D005945 ORTHO05D006749 1.8e-45 189.1 1054 24.5
ClCG08G015230 Citrullus lanatus HOM05D005945 ORTHO05D006749 3.1e-45 188.3 1052 23.9
Oeu056183.1 Olea europaea HOM05D005945 ORTHO05D006749 3.1e-45 188.3 1076 25.4
Ca_03064_v3 Cicer arietinum L. HOM05D005945 ORTHO05D006749 1.2e-44 186.4 513 32.4
Eucgr.F01555 Eucalyptus grandis HOM05D005945 ORTHO05D006749 1.5e-44 186.0 1113 25.9
TWI12G1232 Tripterygium wilfordii HOM05D005945 ORTHO05D006749 3.4e-44 184.9 297 41.1
Peaxi162Scf00690g00118 Petunia axillaris HOM05D005945 ORTHO05D006749 2.2e-43 182.2 491 33.0
Glyma.03G071500 Glycine max HOM05D005945 ORTHO05D006749 1.1e-42 179.9 1073 24.8
Solyc04g080200.4 Solanum lycopersicum HOM05D005945 ORTHO05D006749 1.1e-42 179.9 413 35.6
PGSC0003DMG400005162 Solanum tuberosum HOM05D005945 ORTHO05D006749 1.4e-42 179.5 329 38.9
Sopen04g033790 Solanum pennellii HOM05D005945 ORTHO05D006749 1.9e-42 179.1 329 39.2
Atru.chr13.502 Acer truncatum HOM05D005945 ORTHO05D006749 1.2e-41 176.4 259 42.5
Cc10_g03040 Coffea canephora HOM05D005945 ORTHO05D006749 6.0e-41 174.1 678 28.2
Migut.C00710 Erythranthe guttata HOM05D005945 ORTHO05D006749 6.0e-41 174.1 648 27.9
Atru.chr13.504 Acer truncatum HOM05D005945 ORTHO05D006749 7.9e-41 173.7 460 32.4
Phvul.010G012000 Phaseolus vulgaris HOM05D005945 ORTHO05D006749 1.5e-39 169.5 395 34.2
Glyma.01G104600 Glycine max HOM05D005945 ORTHO05D006749 5.6e-39 167.5 300 39.7
PGR031G1506 Punica granatum HOM05D005945 ORTHO05D006749 5.6e-39 167.5 305 37.7
Dinv36067 Davidia involucrata HOM05D005945 ORTHO05D006749 1.3e-38 166.4 284 38.0
MSTRG.25161 Avicennia marina HOM05D005945 ORTHO05D006749 2.1e-38 165.6 623 29.5
Hund26580 Selenicereus undatus HOM05D005945 ORTHO05D006749 1.8e-37 162.5 240 43.8
Lsat_1_v5_gn_1_17620 Lactuca sativa HOM05D005945 ORTHO05D006749 3.1e-37 161.8 414 32.9
Lj4A42T73 Lonicera japonica HOM05D005945 ORTHO05D006749 6.9e-37 160.6 163 52.8
PSO541G4169 Papaver somniferum HOM05D005945 ORTHO05D006749 6.9e-37 160.6 252 40.1
TAR628G0416 Trochodendron aralioides HOM05D005945 ORTHO05D006749 6.9e-37 160.6 245 42.9
PSO675G9049 Papaver somniferum HOM05D005945 ORTHO05D006749 9.0e-37 160.2 306 34.3
HanXRQChr04g0105591 Helianthus annuus HOM05D005945 ORTHO05D006749 1.2e-36 159.8 258 41.1
VMungo0331G0095 Vigna mungo HOM05D005945 ORTHO05D006749 2.0e-36 159.1 444 30.9
Lj3g0003314 Lotus japonicus HOM05D005945 ORTHO05D006749 3.4e-36 158.3 376 33.8
Thhalv10005811m.g Eutrema salsugineum HOM05D005945 ORTHO05D006749 7.6e-36 157.1 317 36.0
ECA247G0868 Erigeron canadensis HOM05D005945 ORTHO05D006749 1.7e-35 156.0 1091 24.6
Aa31LG10G11720 Aethionema arabicum HOM05D005945 ORTHO05D006749 2.2e-35 155.6 356 32.9
THA.LOC104803244 Tarenaya hassleriana HOM05D005945 ORTHO05D006749 2.2e-35 155.6 313 34.2
SGA_v2.0_scaffold326G48709 Striga asiatica HOM05D005945 ORTHO05D006749 5.5e-34 151.0 246 41.1
Lalb_Chr03g0042671 Lupinus albus HOM05D005945 ORTHO05D006749 1.6e-33 149.4 388 30.7
BolC8t50829H Brassica oleracea HOM05D005945 ORTHO05D006749 4.6e-33 147.9 316 33.5
BcaC07g39998 Brassica carinata HOM05D005945 ORTHO05D006749 1.0e-32 146.7 305 34.1
C08p32110 Brassica napus HOM05D005945 ORTHO05D006749 1.0e-32 146.7 305 34.1
Lj2g0002553 Lotus japonicus HOM05D005945 ORTHO05D006749 1.3e-32 146.4 283 39.2
A09p49740 Brassica napus HOM05D005945 ORTHO05D006749 3.0e-32 145.2 305 34.4
BraA09t40427Z Brassica rapa HOM05D005945 ORTHO05D006749 3.0e-32 145.2 305 34.4
MBI16_g17464_MAGBIO Magnolia biondii HOM05D005945 ORTHO05D006749 5.1e-32 144.4 1124 23.5
vmacro21631 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 1.5e-31 142.9 143 50.3
DCAR_008766 Daucus carota HOM05D005945 ORTHO05D006749 1.9e-31 142.5 347 33.1
Sc15g0006890 Simmondsia chinensis HOM05D005945 ORTHO05D006749 2.5e-31 142.1 674 26.4
Actinidia22556 Actinidia chinensis HOM05D005945 ORTHO05D006749 7.4e-31 140.6 485 28.2
HanXRQChr04g0105581 Helianthus annuus HOM05D005945 ORTHO05D006749 7.4e-31 140.6 259 39.0
Oeu036192.1 Olea europaea HOM05D005945 ORTHO05D006749 7.4e-31 140.6 610 28.5
Carub.0005s2360 Capsella rubella HOM05D005945 ORTHO05D006749 1.6e-30 139.4 311 33.1
AT3G56870 Arabidopsis thaliana HOM05D005945 ORTHO05D006749 2.1e-30 139.0 314 33.1
AL5G38260 Arabidopsis lyrata HOM05D005945 ORTHO05D006749 3.7e-30 138.3 317 33.8
Gohir.D02G094500 Gossypium hirsutum HOM05D005945 ORTHO05D006749 6.2e-30 137.5 476 30.3
AUR62043686 Chenopodium quinoa HOM05D005945 ORTHO05D006749 1.4e-29 136.3 1075 24.7
EL10Ac1g01817 Beta vulgaris HOM05D005945 ORTHO05D006749 4.0e-29 134.8 1061 23.0
Sp5g05720 Schrenkiella parvula HOM05D005945 ORTHO05D006749 4.5e-28 131.3 1061 23.1
Gorai.005G107400 Gossypium raimondii HOM05D005945 ORTHO05D006749 7.6e-28 130.6 478 30.1
AUR62038825 Chenopodium quinoa HOM05D005945 ORTHO05D006749 1.3e-27 129.8 215 40.0
CARHR167020 Cardamine hirsuta HOM05D005945 ORTHO05D006749 2.9e-27 128.6 235 40.0
Sed0010063 Sechium edule HOM05D005945 ORTHO05D006749 4.9e-27 127.9 610 26.4
BcaC07g40112 Brassica carinata HOM05D005945 ORTHO05D006749 6.5e-27 127.5 407 29.2
vmacro21630 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 5.5e-26 124.4 856 24.2
Ah.11g043130 Amaranthus hybridus HOM05D005945 ORTHO05D006749 2.3e-24 119.0 1057 22.7
Lalb_Chr19g0125071 Lupinus albus HOM05D005945 ORTHO05D006749 2.3e-24 119.0 194 38.7
Aqoxy4G01559 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 2.8e-22 112.1 1069 21.3
Aqoxy4G01586 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 1.8e-21 109.4 378 29.1
Aqoxy6G01057 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 4.1e-21 108.2 1064 23.6
HPP92_021270 Vanilla planifolia HOM05D005945 ORTHO05D006749 6.9e-21 107.5 233 37.3
Ah.05g167400 Amaranthus hybridus HOM05D005945 ORTHO05D006749 1.3e-19 103.2 270 28.5
Sc18g0006320 Simmondsia chinensis HOM05D005945 ORTHO05D006749 2.5e-18 99.0 229 31.4
ATR0618G067 Amborella trichopoda HOM05D005945 ORTHO05D006749 2.3e-16 92.4 168 38.7
Zm00001eb021170 Zea mays HOM05D005945 ORTHO05D006749 5.7e-15 87.8 281 30.2
Zm00001eb404680 Zea mays HOM05D005945 ORTHO05D006749 1.3e-14 86.7 282 29.8
Os03g0594700 Oryza sativa ssp. japonica HOM05D005945 ORTHO05D006749 1.8e-13 82.8 234 31.6
Potri.002G262601 Populus trichocarpa HOM05D005945 ORTHO05D006749 4.5e-12 78.2 111 42.3
Sabra02G0199400 Salix brachista HOM05D005945 ORTHO05D006749 1.0e-11 77.0 86 48.8
SEGI_34412 Sequoiadendron giganteum HOM05D057448 ORTHO05D006749 6.5e-11 74.3 112 38.4
Lalb_Chr19g0125061 Lupinus albus HOM05D005945 ORTHO05D006749 7.9e-09 67.4 264 28.4
TAR381G0602 Trochodendron aralioides HOM05D005945 ORTHO05D006749 7.4e-07 60.8 139 33.8


User provided reference genes

Program Settings