Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.15G075700 Carya illinoinensis HOM05D005308 ORTHO05D006494 0.0e+00 1251.5 663 100.0
Haze_17987 Corylus avellana HOM05D005308 ORTHO05D006494 9.4e-276 953.4 668 76.2
Cfa018137 Carpinus fangiana HOM05D005308 ORTHO05D006494 8.8e-274 946.8 676 75.0
QL02p007937 Quercus lobata HOM05D005308 ORTHO05D006494 8.5e-269 930.2 664 76.5
Potri.002G262900 Populus trichocarpa HOM05D005308 ORTHO05D006494 2.3e-245 852.4 661 68.7
Sabra02G0199700 Salix brachista HOM05D005308 ORTHO05D006494 1.9e-244 849.4 661 68.5
Duzib041G0136 Durio zibethinus HOM05D005308 ORTHO05D006494 1.8e-242 842.8 670 68.1
Ciclev10000534m.g Citrus clementina HOM05D005308 ORTHO05D006494 6.8e-242 840.9 671 65.1
Dinv39406 Davidia involucrata HOM05D005308 ORTHO05D006494 3.7e-240 835.1 641 69.7
Potri.014G180900 Populus trichocarpa HOM05D005308 ORTHO05D006494 8.3e-240 833.9 662 68.3
RcHm_v2.0_Chr6g0300791 Rosa chinensis HOM05D005308 ORTHO05D006494 1.6e-238 829.7 658 67.0
GSVIVG01009686001 Vitis vinifera HOM05D005308 ORTHO05D006494 1.6e-238 829.7 662 66.5
Atru.chr8.2603 Acer truncatum HOM05D005308 ORTHO05D006494 6.0e-238 827.8 664 65.7
Glyma.14G076200 Glycine max HOM05D005308 ORTHO05D006494 1.0e-237 827.0 661 65.4
Atru.chr13.513 Acer truncatum HOM05D005308 ORTHO05D006494 1.3e-237 826.6 664 65.5
Manes.05G161700 Manihot esculenta HOM05D005308 ORTHO05D006494 1.5e-236 823.2 660 64.4
Prupe.1G381500 Prunus persica HOM05D005308 ORTHO05D006494 1.5e-236 823.2 667 66.0
FAN27G1201 Fragaria x ananassa HOM05D005308 ORTHO05D006494 1.1e-234 817.0 602 70.6
Duzib116G0819 Durio zibethinus HOM05D005308 ORTHO05D006494 1.4e-234 816.6 665 66.5
FvH4_2g39960 Fragaria vesca HOM05D005308 ORTHO05D006494 5.2e-234 814.7 601 70.0
FAN15G3722 Fragaria x ananassa HOM05D005308 ORTHO05D006494 8.9e-234 813.9 599 70.3
Duzib093G0415 Durio zibethinus HOM05D005308 ORTHO05D006494 4.4e-233 811.6 603 71.8
Thecc.08G024400 Theobroma cacao HOM05D005308 ORTHO05D006494 9.9e-233 810.4 663 65.2
Lj5g0021582 Lotus japonicus HOM05D005308 ORTHO05D006494 3.9e-229 798.5 606 66.5
Hma1.2p1_0077F.1_g039700 Hydrangea macrophylla HOM05D005308 ORTHO05D006494 1.4e-226 790.0 670 63.7
Gorai.009G203600 Gossypium raimondii HOM05D005308 ORTHO05D006494 1.8e-226 789.6 727 59.4
ClCG08G015210 Citrullus lanatus HOM05D005308 ORTHO05D006494 3.1e-226 788.9 662 62.8
ClCG08G015240 Citrullus lanatus HOM05D005308 ORTHO05D006494 3.1e-226 788.9 662 62.8
Glyma.17G249600 Glycine max HOM05D005308 ORTHO05D006494 2.6e-225 785.8 666 63.7
MD08G1033400 Malus domestica HOM05D005308 ORTHO05D006494 7.6e-225 784.3 666 63.2
MELO3C010930.2 Cucumis melo HOM05D005308 ORTHO05D006494 3.8e-224 781.9 671 62.4
Medtr1g022045 Medicago truncatula HOM05D005308 ORTHO05D006494 6.4e-224 781.2 662 62.4
Ca_13346_v3 Cicer arietinum L. HOM05D005308 ORTHO05D006494 2.4e-223 779.2 660 61.2
Gohir.A05G195300 Gossypium hirsutum HOM05D005308 ORTHO05D006494 5.4e-223 778.1 693 60.6
Gohir.D05G198500 Gossypium hirsutum HOM05D005308 ORTHO05D006494 9.3e-223 777.3 726 59.0
PGR031G2270 Punica granatum HOM05D005308 ORTHO05D006494 1.9e-220 769.6 675 61.0
Phvul.001G015400 Phaseolus vulgaris HOM05D005308 ORTHO05D006494 2.5e-220 769.2 660 61.8
Psat6g007480 Pisum sativum HOM05D005308 ORTHO05D006494 2.5e-220 769.2 662 60.6
CsaV3_2G028560 Cucumis sativus L. HOM05D005308 ORTHO05D006494 5.6e-220 768.1 659 61.9
Lalb_Chr22g0355491 Lupinus albus HOM05D005308 ORTHO05D006494 1.3e-219 766.9 580 68.3
MD15G1030000 Malus domestica HOM05D005308 ORTHO05D006494 1.3e-219 766.9 664 63.1
VMungo0647G0443 Vigna mungo HOM05D005308 ORTHO05D006494 2.1e-219 766.1 664 61.4
COL.COLO4_26340 Corchorus olitorius HOM05D005308 ORTHO05D006494 1.4e-218 763.5 532 74.1
TPR.G29756 Trifolium pratense HOM05D005308 ORTHO05D006494 2.0e-217 759.6 670 60.9
Sed0011840 Sechium edule HOM05D005308 ORTHO05D006494 4.5e-217 758.4 658 60.9
Gorai.010G011100 Gossypium raimondii HOM05D005308 ORTHO05D006494 5.8e-217 758.1 662 61.2
EL10Ac9g23018 Beta vulgaris HOM05D005308 ORTHO05D006494 9.9e-217 757.3 589 66.0
Gohir.D06G008300 Gossypium hirsutum HOM05D005308 ORTHO05D006494 3.8e-216 755.4 662 61.2
CsaV3_2G028600 Cucumis sativus L. HOM05D005308 ORTHO05D006494 8.4e-216 754.2 657 60.3
Gohir.A06G010900 Gossypium hirsutum HOM05D005308 ORTHO05D006494 5.4e-215 751.5 662 60.6
Sed0021548 Sechium edule HOM05D005308 ORTHO05D006494 1.0e-213 747.3 658 60.3
Eucgr.F01908 Eucalyptus grandis HOM05D005308 ORTHO05D006494 1.3e-213 746.9 665 62.0
Cc03_g06460 Coffea canephora HOM05D005308 ORTHO05D006494 2.1e-211 739.6 658 59.3
vmacro04517 Vaccinium macrocarpon HOM05D005308 ORTHO05D006494 2.1e-211 739.6 684 58.2
Sc02g0006300 Simmondsia chinensis HOM05D005308 ORTHO05D006494 5.3e-210 734.9 657 58.1
Rhsim07G0237100 Rhododendron simsii HOM05D005308 ORTHO05D006494 2.0e-209 733.0 683 58.9
AUR62032897 Chenopodium quinoa HOM05D005308 ORTHO05D006494 1.3e-208 730.3 592 63.3
Ah.01g011450 Amaranthus hybridus HOM05D005308 ORTHO05D006494 4.9e-208 728.4 604 63.1
TWI73G1022 Tripterygium wilfordii HOM05D005308 ORTHO05D006494 3.2e-207 725.7 657 60.0
Nitab4.5_0003783g0070 Nicotiana tabacum HOM05D005308 ORTHO05D006494 4.2e-207 725.3 666 57.5
TAR376G0813 Trochodendron aralioides HOM05D005308 ORTHO05D006494 9.3e-207 724.2 596 62.6
Aqoxy3G02057 Aquilegia oxysepala HOM05D005308 ORTHO05D006494 1.3e-205 720.3 669 58.7
Nitab4.5_0000110g0380 Nicotiana tabacum HOM05D005308 ORTHO05D006494 8.7e-205 717.6 668 57.3
Lj4P784T41 Lonicera japonica HOM05D005308 ORTHO05D006494 1.3e-203 713.8 598 60.5
CSS0027115 Camellia sinensis var. sinensis HOM05D005308 ORTHO05D006494 1.4e-199 700.3 644 60.9
PGSC0003DMG400005144 Solanum tuberosum HOM05D005308 ORTHO05D006494 1.4e-199 700.3 663 56.4
Nn3g19273 Nelumbo nucifera HOM05D005308 ORTHO05D006494 5.5e-199 698.4 592 62.5
Solyc04g080180.1 Solanum lycopersicum HOM05D005308 ORTHO05D006494 1.6e-198 696.8 664 56.6
Sopen04g033770 Solanum pennellii HOM05D005308 ORTHO05D006494 2.3e-197 693.0 663 56.4
THA.LOC104813841 Tarenaya hassleriana HOM05D005308 ORTHO05D006494 1.5e-196 690.3 682 55.7
CAN.G1126.42 Capsicum annuum HOM05D005308 ORTHO05D006494 1.1e-194 684.1 670 56.0
PSO782G4716 Papaver somniferum HOM05D005308 ORTHO05D006494 5.9e-193 678.3 686 55.2
PSO063G3485 Papaver somniferum HOM05D005308 ORTHO05D006494 1.1e-191 674.1 736 53.0
Oeu052497.1 Olea europaea HOM05D005308 ORTHO05D006494 2.1e-190 669.8 682 54.4
Peaxi162Scf00690g00113 Petunia axillaris HOM05D005308 ORTHO05D006494 1.0e-189 667.5 673 55.1
Sp5g30270 Schrenkiella parvula HOM05D005308 ORTHO05D006494 1.3e-189 667.2 611 57.9
AUR62017754 Chenopodium quinoa HOM05D005308 ORTHO05D006494 3.0e-189 666.0 492 66.7
MSTRG.11457 Avicennia marina HOM05D005308 ORTHO05D006494 1.9e-188 663.3 607 57.7
Thhalv10018268m.g Eutrema salsugineum HOM05D005308 ORTHO05D006494 1.8e-186 656.8 670 53.7
DCAR_020966 Daucus carota HOM05D005308 ORTHO05D006494 9.1e-186 654.4 546 62.1
MSTRG.23132 Avicennia marina HOM05D005308 ORTHO05D006494 1.5e-185 653.7 680 53.4
Carub.0002s2195 Capsella rubella HOM05D005308 ORTHO05D006494 2.6e-185 652.9 670 54.3
Oeu016389.1 Olea europaea HOM05D005308 ORTHO05D006494 2.2e-184 649.8 551 60.3
SalBow5G1122 Salvia bowleyana HOM05D005308 ORTHO05D006494 2.2e-184 649.8 520 62.3
THA.LOC104806374 Tarenaya hassleriana HOM05D005308 ORTHO05D006494 8.5e-184 647.9 667 54.7
CARHR068470 Cardamine hirsuta HOM05D005308 ORTHO05D006494 1.1e-183 647.5 603 57.7
DCAR_019524 Daucus carota HOM05D005308 ORTHO05D006494 5.1e-181 638.6 599 56.8
Aa31LG7G4080 Aethionema arabicum HOM05D005308 ORTHO05D006494 4.4e-180 635.6 674 51.6
Migut.I00006 Erythranthe guttata HOM05D005308 ORTHO05D006494 1.7e-179 633.6 617 55.9
AT1G75140 Arabidopsis thaliana HOM05D005308 ORTHO05D006494 2.8e-179 632.9 604 56.8
AL2G35040 Arabidopsis lyrata HOM05D005308 ORTHO05D006494 1.2e-177 627.5 604 56.1
MBI04_g27271_MAGBIO Magnolia biondii HOM05D005308 ORTHO05D006494 1.7e-176 623.6 590 55.6
BraA06t24665Z Brassica rapa HOM05D005308 ORTHO05D006494 4.2e-175 619.0 663 51.1
A06p15530 Brassica napus HOM05D005308 ORTHO05D006494 1.6e-174 617.1 663 51.0
CSS0028044 Camellia sinensis var. sinensis HOM05D005308 ORTHO05D006494 2.7e-174 616.3 443 69.5
AL1G31960 Arabidopsis lyrata HOM05D005308 ORTHO05D006494 4.7e-174 615.5 600 54.0
Sp1g17280 Schrenkiella parvula HOM05D005308 ORTHO05D006494 6.1e-174 615.1 601 53.9
HanXRQChr05g0151851 Helianthus annuus HOM05D005308 ORTHO05D006494 2.3e-173 613.2 606 55.6
AT1G19370 Arabidopsis thaliana HOM05D005308 ORTHO05D006494 3.0e-173 612.8 602 53.8
BolC6t38403H Brassica oleracea HOM05D005308 ORTHO05D006494 3.9e-173 612.5 599 55.9
BcaB02g06995 Brassica carinata HOM05D005308 ORTHO05D006494 6.7e-173 611.7 598 55.7
C06p32820 Brassica napus HOM05D005308 ORTHO05D006494 8.8e-173 611.3 598 55.7
Carub.0001s1896 Capsella rubella HOM05D005308 ORTHO05D006494 8.8e-173 611.3 601 53.6
BolC5t30482H Brassica oleracea HOM05D005308 ORTHO05D006494 3.3e-172 609.4 523 58.5
BraA07t30544Z Brassica rapa HOM05D005308 ORTHO05D006494 9.7e-172 607.8 596 55.7
A07p29040 Brassica napus HOM05D005308 ORTHO05D006494 1.3e-171 607.4 596 55.7
BcaB07g31957 Brassica carinata HOM05D005308 ORTHO05D006494 1.0e-168 597.8 671 50.1
CARHR019960 Cardamine hirsuta HOM05D005308 ORTHO05D006494 5.0e-168 595.5 571 54.8
Aa31LG4G5330 Aethionema arabicum HOM05D005308 ORTHO05D006494 8.5e-168 594.7 578 53.6
Lsat_1_v5_gn_5_29021 Lactuca sativa HOM05D005308 ORTHO05D006494 1.6e-166 590.5 586 54.4
ECA246G5303 Erigeron canadensis HOM05D005308 ORTHO05D006494 1.8e-165 587.0 572 55.2
BcaB02g07009 Brassica carinata HOM05D005308 ORTHO05D006494 3.0e-165 586.3 598 55.2
CDE11G0691 Ceratophyllum demersum HOM05D005308 ORTHO05D006494 3.1e-162 576.2 598 50.8
Thhalv10009294m.g Eutrema salsugineum HOM05D005308 ORTHO05D006494 6.5e-160 568.5 603 52.4
SHI08167 Sapria himalayana HOM05D005308 ORTHO05D006494 1.3e-152 544.3 557 54.8
SEGI_39092 Sequoiadendron giganteum HOM05D005308 ORTHO05D006494 1.2e-150 537.7 640 46.9
ATR0829G103 Amborella trichopoda HOM05D005308 ORTHO05D006494 8.9e-149 531.6 593 49.1
SGA_v2.0_scaffold90G27910 Striga asiatica HOM05D005308 ORTHO05D006494 2.8e-147 526.6 706 44.8
MBI04_g21134_MAGBIO Magnolia biondii HOM05D005308 ORTHO05D006494 3.5e-145 519.6 591 49.2
Os06g0115200 Oryza sativa ssp. japonica HOM05D005308 ORTHO05D006494 9.2e-130 468.4 633 42.5
Zm00001eb269050 Zea mays HOM05D005308 ORTHO05D006494 3.0e-128 463.4 562 44.7
Actinidia38015 Actinidia chinensis HOM05D005308 ORTHO05D006494 1.4e-125 454.5 610 46.7
C05p17770 Brassica napus HOM05D005308 ORTHO05D006494 4.0e-101 373.2 256 69.1
Pp3c20_21760 Physcomitrium patens HOM05D005308 ORTHO05D006494 4.6e-97 359.8 562 38.4
Mapoly0094s0054 Marchantia polymorpha HOM05D005308 ORTHO05D006494 5.6e-95 352.8 581 37.9
AagrBONN_evm.TU.Sc2ySwM_228.2792 Anthoceros agrestis HOM05D005308 ORTHO05D006494 1.8e-93 347.8 475 41.5
Pp3c10_23930 Physcomitrium patens HOM05D005308 ORTHO05D006494 3.1e-93 347.1 680 34.3
SMO361G0791 Selaginella moellendorffii HOM05D005308 ORTHO05D006494 1.7e-91 341.3 411 45.0
BcaNung07297 Brassica carinata HOM05D005308 ORTHO05D006494 5.5e-90 336.3 236 65.7
BcaNung07223 Brassica carinata HOM05D005308 ORTHO05D006494 2.3e-88 330.9 318 53.8
BcaB02g07002 Brassica carinata HOM05D005308 ORTHO05D006494 8.4e-83 312.4 220 68.2
unitig_0.g1436 Utricularia gibba HOM05D005308 ORTHO05D006494 8.5e-75 285.8 329 48.6
A07p29060 Brassica napus HOM05D005308 ORTHO05D006494 7.2e-50 203.0 125 76.0
unitig_0.g1437 Utricularia gibba HOM05D005308 ORTHO05D006494 1.5e-47 195.3 246 45.5
MCO12G330 Micromonas commoda HOM05D005308 ORTHO05D006494 9.5e-18 96.3 605 22.3
CBR_g49554 Chara braunii HOM05D005308 ORTHO05D006494 1.5e-07 62.4 146 33.6
SHI17314 Sapria himalayana HOM05D005308 ORTHO05D006494 7.5e-07 60.1 139 36.0


User provided reference genes

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