Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.15G075500 Carya illinoinensis HOM05D006286 ORTHO05D007741 4.6e-109 397.9 198 100.0
CiPaw.03G100700 Carya illinoinensis HOM05D006286 ORTHO05D007741 4.6e-85 318.2 212 77.4
Cfa008258 Carpinus fangiana HOM05D006286 ORTHO05D007741 3.4e-80 302.0 209 73.7
Haze_13788 Corylus avellana HOM05D006286 ORTHO05D007741 1.7e-79 299.7 212 73.1
QL09p015278 Quercus lobata HOM05D006286 ORTHO05D007741 1.0e-76 290.4 210 72.4
FAN10G3629 Fragaria x ananassa HOM05D006286 ORTHO05D007741 2.1e-74 282.7 211 68.2
Thecc.03G167300 Theobroma cacao HOM05D006286 ORTHO05D007741 2.1e-74 282.7 211 67.3
RcHm_v2.0_Chr1g0376301 Rosa chinensis HOM05D006286 ORTHO05D007741 3.6e-74 282.0 211 67.8
Ciclev10005723m.g Citrus clementina HOM05D006286 ORTHO05D007741 6.2e-74 281.2 209 66.5
Prupe.2G287700 Prunus persica HOM05D006286 ORTHO05D007741 6.2e-74 281.2 205 69.8
FAN01G0056 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.4e-73 280.0 211 67.8
FAN06G1618 Fragaria x ananassa HOM05D006286 ORTHO05D007741 4.0e-73 278.5 211 67.3
Cpa.g.sc4.205 Carica papaya HOM05D006286 ORTHO05D007741 5.3e-73 278.1 210 67.1
FvH4_7g28750 Fragaria vesca HOM05D006286 ORTHO05D007741 6.9e-73 277.7 211 66.8
Eucgr.A02845 Eucalyptus grandis HOM05D006286 ORTHO05D007741 2.0e-72 276.2 210 67.1
Sabra15G0147300 Salix brachista HOM05D006286 ORTHO05D007741 4.5e-72 275.0 202 68.8
GSVIVG01018444001 Vitis vinifera HOM05D006286 ORTHO05D007741 4.5e-72 275.0 203 69.0
Sed0023063 Sechium edule HOM05D006286 ORTHO05D007741 5.8e-72 274.6 201 68.7
FAN06G4550 Fragaria x ananassa HOM05D006286 ORTHO05D007741 7.6e-72 274.2 211 66.4
TWI39G0272 Tripterygium wilfordii HOM05D006286 ORTHO05D007741 7.6e-72 274.2 202 68.8
CSS0046699 Camellia sinensis var. sinensis HOM05D006286 ORTHO05D007741 9.9e-72 273.9 205 69.8
FAN03G0937 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.3e-71 273.5 215 66.0
MD01G1193900 Malus domestica HOM05D006286 ORTHO05D007741 1.3e-71 273.5 204 68.6
Manes.14G030600 Manihot esculenta HOM05D006286 ORTHO05D007741 3.8e-71 271.9 202 67.3
FAN03G0223 Fragaria x ananassa HOM05D006286 ORTHO05D007741 4.9e-71 271.6 215 65.6
Gohir.A09G179500 Gossypium hirsutum HOM05D006286 ORTHO05D007741 8.4e-71 270.8 202 67.8
Potri.015G135300 Populus trichocarpa HOM05D006286 ORTHO05D007741 1.1e-70 270.4 202 66.8
arahy.Tifrunner.gnm1.ann1.MQ4KH5 Arachis hypogaea HOM05D006286 ORTHO05D007741 1.4e-70 270.0 214 64.0
TAR629G0337 Trochodendron aralioides HOM05D006286 ORTHO05D007741 2.4e-70 269.2 203 67.5
Atru.chr1.554 Acer truncatum HOM05D006286 ORTHO05D007741 4.2e-70 268.5 211 65.4
Nn1g01303 Nelumbo nucifera HOM05D006286 ORTHO05D007741 4.2e-70 268.5 203 66.5
ClCG05G007720 Citrullus lanatus HOM05D006286 ORTHO05D007741 9.3e-70 267.3 211 64.5
Duzib084G1364 Durio zibethinus HOM05D006286 ORTHO05D007741 9.3e-70 267.3 211 65.9
Rhsim03G0175100 Rhododendron simsii HOM05D006286 ORTHO05D007741 2.1e-69 266.2 205 66.8
Gorai.013G064300 Gossypium raimondii HOM05D006286 ORTHO05D007741 2.7e-69 265.8 211 63.5
Gohir.D13G056900 Gossypium hirsutum HOM05D006286 ORTHO05D007741 4.6e-69 265.0 211 63.5
Gorai.006G196900 Gossypium raimondii HOM05D006286 ORTHO05D007741 1.3e-68 263.5 211 63.5
Lj5g0022226 Lotus japonicus HOM05D006286 ORTHO05D007741 1.3e-68 263.5 217 63.6
CANSAT25G1059 Cannabis sativa HOM05D006286 ORTHO05D007741 6.7e-68 261.2 203 65.5
CsaV3_3G016660 Cucumis sativus L. HOM05D006286 ORTHO05D007741 8.7e-68 260.8 212 62.7
Gohir.A13G064700 Gossypium hirsutum HOM05D006286 ORTHO05D007741 1.1e-67 260.4 211 63.0
MELO3C006861.2 Cucumis melo HOM05D006286 ORTHO05D007741 1.9e-67 259.6 203 64.5
Ca_10810_v3 Cicer arietinum L. HOM05D006286 ORTHO05D007741 2.5e-67 259.2 206 64.1
VMungo0720G2540 Vigna mungo HOM05D006286 ORTHO05D007741 2.5e-67 259.2 214 62.1
Cc02_g03560 Coffea canephora HOM05D006286 ORTHO05D007741 4.3e-67 258.5 211 63.0
Actinidia25052 Actinidia chinensis HOM05D006286 ORTHO05D007741 9.6e-67 257.3 201 65.7
Lalb_Chr06g0160901 Lupinus albus HOM05D006286 ORTHO05D007741 9.6e-67 257.3 206 63.6
Phvul.007G065700 Phaseolus vulgaris HOM05D006286 ORTHO05D007741 1.3e-66 256.9 214 61.2
Rhsim09G0195200 Rhododendron simsii HOM05D006286 ORTHO05D007741 3.7e-66 255.4 205 62.9
DCAR_018141 Daucus carota HOM05D006286 ORTHO05D007741 8.1e-66 254.2 203 64.0
Glyma.10G240400 Glycine max HOM05D006286 ORTHO05D007741 8.1e-66 254.2 217 60.8
HanXRQChr14g0461801 Helianthus annuus HOM05D006286 ORTHO05D007741 8.1e-66 254.2 209 63.2
THA.LOC104825086 Tarenaya hassleriana HOM05D006286 ORTHO05D007741 1.4e-65 253.4 215 61.9
TPR.G17410 Trifolium pratense HOM05D006286 ORTHO05D007741 1.8e-65 253.1 215 61.4
Lsat_1_v5_gn_2_130220 Lactuca sativa HOM05D006286 ORTHO05D007741 5.3e-65 251.5 212 60.4
Psat6g201680 Pisum sativum HOM05D006286 ORTHO05D007741 6.9e-65 251.1 218 62.4
arahy.Tifrunner.gnm1.ann1.TWGE9F Arachis hypogaea HOM05D006286 ORTHO05D007741 9.0e-65 250.8 203 63.5
Nitab4.5_0004911g0020 Nicotiana tabacum HOM05D006286 ORTHO05D007741 3.4e-64 248.8 211 61.6
Dinv28504 Davidia involucrata HOM05D006286 ORTHO05D007741 7.6e-64 247.7 274 52.9
PGSC0003DMG400024248 Solanum tuberosum HOM05D006286 ORTHO05D007741 6.5e-63 244.6 201 61.7
Solyc03g006820.3 Solanum lycopersicum HOM05D006286 ORTHO05D007741 1.1e-62 243.8 201 62.2
Sopen03g002810 Solanum pennellii HOM05D006286 ORTHO05D007741 1.1e-62 243.8 201 62.2
Oeu047963.2 Olea europaea HOM05D006286 ORTHO05D007741 1.9e-62 243.0 205 61.5
SalBow2G2245 Salvia bowleyana HOM05D006286 ORTHO05D007741 2.5e-62 242.7 188 66.5
vmacro09869 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 2.5e-62 242.7 201 62.7
CAN.G1097.8 Capsicum annuum HOM05D006286 ORTHO05D007741 3.2e-62 242.3 211 60.2
Aa31sc908G10 Aethionema arabicum HOM05D006286 ORTHO05D007741 4.2e-62 241.9 213 60.1
Ah.13g067810 Amaranthus hybridus HOM05D006286 ORTHO05D007741 9.3e-62 240.7 201 62.7
Actinidia14215 Actinidia chinensis HOM05D006286 ORTHO05D007741 1.2e-61 240.4 216 60.6
EL10Ac3g05740 Beta vulgaris HOM05D006286 ORTHO05D007741 2.1e-61 239.6 201 61.7
Migut.F00396 Erythranthe guttata HOM05D006286 ORTHO05D007741 6.0e-61 238.0 214 58.9
ATR0757G128 Amborella trichopoda HOM05D006286 ORTHO05D007741 7.9e-61 237.7 201 57.7
ECA238G1566 Erigeron canadensis HOM05D006286 ORTHO05D007741 7.9e-61 237.7 202 59.4
SGA_v2.0_scaffold113G31783 Striga asiatica HOM05D006286 ORTHO05D007741 7.9e-61 237.7 202 61.4
PSO782G2014 Papaver somniferum HOM05D006286 ORTHO05D007741 1.0e-60 237.3 204 59.3
Aqoxy7G00487 Aquilegia oxysepala HOM05D006286 ORTHO05D007741 1.8e-60 236.5 204 59.8
Carub.0008s1192 Capsella rubella HOM05D006286 ORTHO05D007741 2.3e-60 236.1 204 60.8
Thhalv10014484m.g Eutrema salsugineum HOM05D006286 ORTHO05D007741 2.3e-60 236.1 214 57.9
Peaxi162Scf00192g00519 Petunia axillaris HOM05D006286 ORTHO05D007741 6.7e-60 234.6 204 59.8
AUR62021266 Chenopodium quinoa HOM05D006286 ORTHO05D007741 1.1e-59 233.8 201 60.2
PSO478G4977 Papaver somniferum HOM05D006286 ORTHO05D007741 1.1e-59 233.8 204 58.8
MSTRG.8433 Avicennia marina HOM05D006286 ORTHO05D007741 2.5e-59 232.6 195 62.1
COL.COLO4_14231 Corchorus olitorius HOM05D006286 ORTHO05D007741 4.3e-59 231.9 187 63.6
PSO782G5477 Papaver somniferum HOM05D006286 ORTHO05D007741 7.4e-59 231.1 204 58.3
Hund04686 Selenicereus undatus HOM05D006286 ORTHO05D007741 1.6e-58 229.9 201 59.2
Sc13g0008250 Simmondsia chinensis HOM05D006286 ORTHO05D007741 1.6e-58 229.9 211 55.9
BcaC04g20627 Brassica carinata HOM05D006286 ORTHO05D007741 8.2e-58 227.6 220 55.5
C09p41380 Brassica napus HOM05D006286 ORTHO05D007741 8.2e-58 227.6 220 55.5
BolC9t57014H Brassica oleracea HOM05D006286 ORTHO05D007741 8.2e-58 227.6 220 55.5
AL8G26180 Arabidopsis lyrata HOM05D006286 ORTHO05D007741 1.1e-57 227.3 204 58.8
AT5G51880 Arabidopsis thaliana HOM05D006286 ORTHO05D007741 1.1e-57 227.3 204 58.8
Sp6g14140 Schrenkiella parvula HOM05D006286 ORTHO05D007741 1.8e-57 226.5 213 56.8
Lj8A31T63 Lonicera japonica HOM05D006286 ORTHO05D007741 3.1e-57 225.7 183 62.8
A10p09720 Brassica napus HOM05D006286 ORTHO05D007741 5.3e-57 224.9 222 54.1
BraA10t43052Z Brassica rapa HOM05D006286 ORTHO05D007741 5.3e-57 224.9 222 54.1
Nitab4.5_0000832g0010 Nicotiana tabacum HOM05D006286 ORTHO05D007741 1.2e-56 223.8 179 64.2
vmacro06741 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 1.5e-56 223.4 192 62.0
PGR042G3452 Punica granatum HOM05D006286 ORTHO05D007741 3.4e-56 222.2 179 64.2
MBI12_g36686_MAGBIO Magnolia biondii HOM05D006286 ORTHO05D007741 1.0e-55 220.7 181 62.4
BcaB08g35541 Brassica carinata HOM05D006286 ORTHO05D007741 6.5e-55 218.0 217 53.0
Os03g0119000 Oryza sativa ssp. japonica HOM05D006286 ORTHO05D007741 1.1e-54 217.2 203 56.2
unitig_37.g11947 Utricularia gibba HOM05D006286 ORTHO05D007741 1.1e-54 217.2 198 58.6
AUR62016058 Chenopodium quinoa HOM05D006286 ORTHO05D007741 3.2e-54 215.7 179 61.5
HPP92_003528 Vanilla planifolia HOM05D006286 ORTHO05D007741 1.8e-52 209.9 205 53.7
Potri.012G133100 Populus trichocarpa HOM05D006286 ORTHO05D007741 2.3e-52 209.5 228 51.8
Glyma.20G154300 Glycine max HOM05D006286 ORTHO05D007741 1.1e-49 200.7 179 59.8
CDE12G0688 Ceratophyllum demersum HOM05D006286 ORTHO05D007741 1.0e-47 194.1 179 55.9
CARHR264790 Cardamine hirsuta HOM05D006286 ORTHO05D007741 3.2e-46 189.1 183 56.3
SMO139G0115 Selaginella moellendorffii HOM05D006286 ORTHO05D007741 4.3e-43 178.7 206 43.7
AagrBONN_evm.TU.Sc2ySwM_368.2699 Anthoceros agrestis HOM05D006286 ORTHO05D007741 1.2e-40 170.6 207 47.3
Mapoly0028s0137 Marchantia polymorpha HOM05D006286 ORTHO05D007741 1.2e-40 170.6 203 47.3
SEGI_34239 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 7.7e-40 167.9 176 50.6
Gohir.D09G174800 Gossypium hirsutum HOM05D006286 ORTHO05D007741 4.2e-38 162.2 99 78.8
Zm00001eb001360 Zea mays HOM05D006286 ORTHO05D007741 2.7e-37 159.5 193 47.7
Actinidia03097 Actinidia chinensis HOM05D006286 ORTHO05D007741 2.6e-35 152.9 130 60.8
Medtr1g101840 Medicago truncatula HOM05D006286 ORTHO05D007741 5.7e-35 151.8 101 74.3
Pp3c22_4190 Physcomitrium patens HOM05D006286 ORTHO05D007741 2.6e-32 142.9 205 40.0
Actinidia13543 Actinidia chinensis HOM05D006286 ORTHO05D007741 5.3e-25 118.6 77 75.3
SHI13825 Sapria himalayana HOM05D000350 ORTHO05D000228 1.4e-17 94.0 154 39.6
MCO04G355 Micromonas commoda HOM05D006286 ORTHO05D007741 7.2e-14 81.6 187 30.5
Ah.14g078790 Amaranthus hybridus HOM05D006286 ORTHO05D007741 2.1e-13 80.1 48 79.2
RcHm_v2.0_Chr1g0376261 Rosa chinensis HOM05D006286 ORTHO05D007741 1.8e-12 77.0 44 77.3
Cre14.g619900 Chlamydomonas reinhardtii HOM05D006286 ORTHO05D007741 5.7e-11 72.0 199 26.6
Cfa025685 Carpinus fangiana HOM05D006286 ORTHO05D007741 1.8e-09 67.0 235 25.1
FvH4_2g14060 Fragaria vesca HOM05D006286 ORTHO05D007741 1.6e-08 63.9 56 57.1


User provided reference genes

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