Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.15G061700 Carya illinoinensis HOM05D008060 ORTHO05D003608 2.5e-63 245.4 129 100.0
Atru.chr13.648 Acer truncatum HOM05D008060 ORTHO05D003608 9.4e-47 190.3 126 80.2
QL02p005402 Quercus lobata HOM05D008060 ORTHO05D003608 1.4e-45 186.4 135 77.8
Ciclev10003142m.g Citrus clementina HOM05D008060 ORTHO05D003608 8.8e-45 183.7 130 76.2
Cfa018526 Carpinus fangiana HOM05D008060 ORTHO05D003608 1.3e-43 179.9 129 76.0
Manes.18G032600 Manihot esculenta HOM05D008060 ORTHO05D003608 4.1e-42 174.9 130 73.1
Thecc.08G011100 Theobroma cacao HOM05D008060 ORTHO05D003608 1.2e-41 173.3 127 74.8
Actinidia23264 Actinidia chinensis HOM05D008060 ORTHO05D003608 2.7e-41 172.2 126 74.6
COL.COLO4_26476 Corchorus olitorius HOM05D008060 ORTHO05D003608 4.5e-41 171.4 127 73.2
Cpa.g.c24415.3 Carica papaya HOM05D008060 ORTHO05D003608 1.7e-40 169.5 129 71.3
TWI14G0405 Tripterygium wilfordii HOM05D008060 ORTHO05D003608 2.2e-40 169.1 133 72.2
Gorai.010G018000 Gossypium raimondii HOM05D008060 ORTHO05D003608 5.0e-40 167.9 128 72.7
Hma1.2p1_0982F.1_g243860 Hydrangea macrophylla HOM05D008060 ORTHO05D003608 5.5e-39 164.5 130 68.5
Rhsim06G0048200 Rhododendron simsii HOM05D008060 ORTHO05D003608 4.7e-38 161.4 126 69.8
RcHm_v2.0_Chr6g0307441 Rosa chinensis HOM05D008060 ORTHO05D003608 5.7e-36 154.5 134 69.4
Nn1g05834 Nelumbo nucifera HOM05D008060 ORTHO05D003608 9.8e-36 153.7 130 68.5
FAN15G3536 Fragaria x ananassa HOM05D006157 ORTHO05D007826 1.3e-35 153.3 126 69.8
Eucgr.C04396 Eucalyptus grandis HOM05D008060 ORTHO05D003608 2.8e-35 152.1 123 66.7
Potri.014G032100 Populus trichocarpa HOM05D008060 ORTHO05D003608 3.7e-35 151.8 133 66.2
vmacro21539 Vaccinium macrocarpon HOM05D008060 ORTHO05D003608 6.3e-35 151.0 126 66.7
Prupe.1G438700 Prunus persica HOM05D008060 ORTHO05D003608 1.8e-34 149.4 130 66.9
arahy.Tifrunner.gnm1.ann1.QG0KJB Arachis hypogaea HOM05D008060 ORTHO05D003608 2.4e-34 149.1 122 64.8
arahy.Tifrunner.gnm1.ann1.RCB3UV Arachis hypogaea HOM05D008060 ORTHO05D003608 2.4e-34 149.1 122 64.8
TAR628G0327 Trochodendron aralioides HOM05D008060 ORTHO05D003608 3.1e-34 148.7 118 69.5
Oeu009551.5 Olea europaea HOM05D008060 ORTHO05D003608 7.0e-34 147.5 123 63.4
Sed0005091 Sechium edule HOM05D008060 ORTHO05D003608 2.0e-33 146.0 117 68.4
Lj5g0024863 Lotus japonicus HOM05D008060 ORTHO05D003608 2.7e-33 145.6 130 63.1
Glyma.14G081900 Glycine max HOM05D008060 ORTHO05D003608 3.5e-33 145.2 121 65.3
Ca_13301_v3 Cicer arietinum L. HOM05D008060 ORTHO05D003608 4.5e-33 144.8 125 63.2
FAN20G0621 Fragaria x ananassa HOM05D006157 ORTHO05D007826 5.9e-33 144.4 131 66.4
Glyma.17G243400 Glycine max HOM05D008060 ORTHO05D003608 5.9e-33 144.4 125 63.2
ClCG05G019750 Citrullus lanatus HOM05D008060 ORTHO05D003608 1.0e-32 143.7 116 66.4
Oeu043550.2 Olea europaea HOM05D008060 ORTHO05D003608 1.0e-32 143.7 124 62.1
TPR.G13670 Trifolium pratense HOM05D008060 ORTHO05D003608 1.3e-32 143.3 125 63.2
PSO170G4922 Papaver somniferum HOM05D008060 ORTHO05D003608 1.7e-32 142.9 121 61.2
Medtr1g019790 Medicago truncatula HOM05D008060 ORTHO05D003608 8.6e-32 140.6 128 60.9
PSO210G0392 Papaver somniferum HOM05D008060 ORTHO05D003608 8.6e-32 140.6 129 58.1
Sc02g0007030 Simmondsia chinensis HOM05D008060 ORTHO05D003608 2.5e-31 139.0 128 61.7
Aqoxy5G01268 Aquilegia oxysepala HOM05D008060 ORTHO05D003608 5.5e-31 137.9 123 61.0
VMungo0647G2565 Vigna mungo HOM05D008060 ORTHO05D003608 5.5e-31 137.9 128 58.6
Phvul.001G020900 Phaseolus vulgaris HOM05D008060 ORTHO05D003608 7.2e-31 137.5 127 59.1
CsaV3_4G034180 Cucumis sativus L. HOM05D008060 ORTHO05D003608 9.5e-31 137.1 116 62.9
Psat6g012680 Pisum sativum HOM05D008060 ORTHO05D003608 9.5e-31 137.1 125 61.6
MSTRG.1335 Avicennia marina HOM05D008060 ORTHO05D003608 2.8e-30 135.6 123 61.0
MELO3C016740.2 Cucumis melo HOM05D008060 ORTHO05D003608 1.4e-29 133.3 115 60.9
MD08G1103600 Malus domestica HOM05D008060 ORTHO05D003608 1.4e-29 133.3 106 73.6
ECA247G0743 Erigeron canadensis HOM05D008060 ORTHO05D003608 1.8e-29 132.9 123 60.2
SalBow8G2726 Salvia bowleyana HOM05D008060 ORTHO05D003608 3.0e-29 132.1 123 56.9
SalBow8G3337 Salvia bowleyana HOM05D008060 ORTHO05D003608 3.0e-29 132.1 123 56.9
MD15G1084900 Malus domestica HOM05D008060 ORTHO05D003608 5.2e-29 131.3 105 68.6
Migut.C00596 Erythranthe guttata HOM05D008060 ORTHO05D003608 6.8e-29 131.0 127 59.1
Sabra14G0022600 Salix brachista HOM05D008060 ORTHO05D003608 2.6e-28 129.0 118 61.9
Lsat_1_v5_gn_1_20181 Lactuca sativa HOM05D008060 ORTHO05D003608 3.7e-27 125.2 124 59.7
SalBow7G2854 Salvia bowleyana HOM05D008060 ORTHO05D003608 4.9e-27 124.8 119 55.5
Ah.05g168850 Amaranthus hybridus HOM05D008060 ORTHO05D003608 1.1e-26 123.6 130 53.1
AUR62022431 Chenopodium quinoa HOM05D008060 ORTHO05D003608 1.8e-26 122.9 130 54.6
Lalb_Chr14g0368781 Lupinus albus HOM05D008060 ORTHO05D003608 1.8e-26 122.9 102 66.7
QL02p005445 Quercus lobata HOM05D008060 ORTHO05D003608 2.7e-25 119.0 73 83.6
CANSAT54G1663 Cannabis sativa HOM05D008060 ORTHO05D003608 7.8e-25 117.5 128 55.5
Zm00001eb193760 Zea mays HOM05D008060 ORTHO05D003608 4.3e-23 111.7 127 51.2
HPP92_016379 Vanilla planifolia HOM05D008060 ORTHO05D003608 6.1e-22 107.8 119 50.4
HanXRQChr04g0103541 Helianthus annuus HOM05D008060 ORTHO05D003608 1.0e-21 107.1 105 60.0
Gohir.A06G017100 Gossypium hirsutum HOM05D008060 ORTHO05D003608 1.8e-21 106.3 94 63.8
Os02g0761500 Oryza sativa ssp. japonica HOM05D008060 ORTHO05D003608 2.3e-21 105.9 132 43.9
FAN27G2960 Fragaria x ananassa HOM05D002103 ORTHO05D007890 3.4e-20 102.1 113 55.8
Gohir.D06G015200 Gossypium hirsutum HOM05D008060 ORTHO05D003608 1.3e-19 100.1 90 63.3
SHI08293 Sapria himalayana HOM05D002103 ORTHO05D007890 3.2e-18 95.5 93 53.8
ATR0100G017 Amborella trichopoda HOM05D008060 ORTHO05D003608 4.1e-18 95.1 102 51.0
DCAR_019463 Daucus carota HOM05D002103 ORTHO05D004020 6.8e-13 77.8 54 70.4
RcHm_v2.0_Chr5g0002021 Rosa chinensis HOM05D008060 ORTHO05D003608 1.3e-11 73.6 86 58.1
arahy.Tifrunner.gnm1.ann1.WPNX1F Arachis hypogaea HOM05D008060 ORTHO05D003608 4.9e-11 71.6 75 52.0
SEGI_35444 Sequoiadendron giganteum HOM05D008060 ORTHO05D003608 1.5e-07 60.1 100 34.0
Mapoly0156s0017 Marchantia polymorpha HOM05D033870 ORTHO05D003608 3.6e-06 55.5 59 44.1


User provided reference genes

Program Settings