Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.15G058800 Carya illinoinensis HOM05D000955 ORTHO05D001429 5.3e-44 180.6 92 100.0
CiPaw.15G058600 Carya illinoinensis HOM05D000955 ORTHO05D001429 5.9e-43 177.2 92 97.8
CiPaw.15G058100 Carya illinoinensis HOM05D000955 ORTHO05D001429 9.4e-41 169.9 92 92.4
CiPaw.15G058400 Carya illinoinensis HOM05D000955 ORTHO05D001429 5.2e-39 164.1 92 89.1
Cfa018543 Carpinus fangiana HOM05D000955 ORTHO05D001429 2.1e-16 89.0 78 53.8
QL02p005085 Quercus lobata HOM05D000955 ORTHO05D001429 1.7e-13 79.3 74 47.3
Atru.chr13.673 Acer truncatum HOM05D000955 ORTHO05D001429 5.0e-10 67.8 82 42.7
COL.COLO4_26501 Corchorus olitorius HOM05D000955 ORTHO05D001429 5.0e-10 67.8 75 46.7
Atru.chr13.660 Acer truncatum HOM05D000955 ORTHO05D001429 6.6e-10 67.4 78 43.6
COL.COLO4_08734 Corchorus olitorius HOM05D000955 ORTHO05D001429 2.5e-09 65.5 71 46.5
Duzib093G0375 Durio zibethinus HOM05D000955 ORTHO05D001429 2.5e-09 65.5 83 42.2
CiPaw.15G058900 Carya illinoinensis HOM05D000955 ORTHO05D001429 5.6e-09 64.3 77 41.6
QL02p005158 Quercus lobata HOM05D000955 ORTHO05D001429 5.6e-09 64.3 70 42.9
Thecc.08G008600 Theobroma cacao HOM05D000955 ORTHO05D001429 9.5e-09 63.5 78 42.3
CAN.G705.3 Capsicum annuum HOM05D000955 ORTHO05D001429 1.6e-08 62.8 79 40.5
Gohir.D01G107400 Gossypium hirsutum HOM05D000955 ORTHO05D001429 2.1e-08 62.4 77 40.3
Gorai.002G131800 Gossypium raimondii HOM05D000955 ORTHO05D001429 2.1e-08 62.4 77 40.3
COL.COLO4_17164 Corchorus olitorius HOM05D000955 ORTHO05D001429 2.8e-08 62.0 83 38.6
COL.COLO4_26493 Corchorus olitorius HOM05D000955 ORTHO05D001429 2.8e-08 62.0 71 43.7
Thecc.08G009900 Theobroma cacao HOM05D000955 ORTHO05D001429 2.8e-08 62.0 78 38.5
Gohir.A01G119200 Gossypium hirsutum HOM05D000955 ORTHO05D001429 3.6e-08 61.6 77 39.0
Atru.chr13.674 Acer truncatum HOM05D000955 ORTHO05D001429 4.7e-08 61.2 70 44.3
CAN.G1938.3 Capsicum annuum HOM05D000955 ORTHO05D001429 4.7e-08 61.2 79 39.2
Atru.chr13.675 Acer truncatum HOM05D000955 ORTHO05D001429 6.1e-08 60.8 82 37.8
Duzib116G0476 Durio zibethinus HOM05D000955 ORTHO05D001429 6.1e-08 60.8 77 39.0
Thecc.04G032600 Theobroma cacao HOM05D000955 ORTHO05D001429 6.1e-08 60.8 69 44.9
QL02p005194 Quercus lobata HOM05D000955 ORTHO05D001429 8.0e-08 60.5 76 40.8
Thecc.04G032100 Theobroma cacao HOM05D000955 ORTHO05D001429 1.0e-07 60.1 68 44.1
Manes.18G036200 Manihot esculenta HOM05D000955 ORTHO05D001429 1.4e-07 59.7 69 42.0
QL02p005235 Quercus lobata HOM05D000955 ORTHO05D001429 1.8e-07 59.3 77 37.7
CiPaw.15G059000 Carya illinoinensis HOM05D000955 ORTHO05D001429 2.3e-07 58.9 81 38.3
Dinv29919 Davidia involucrata HOM05D000955 ORTHO05D001429 2.3e-07 58.9 67 43.3
Gohir.A06G018101 Gossypium hirsutum HOM05D000955 ORTHO05D001429 2.3e-07 58.9 70 42.9
Hma1.2p1_0982F.1_g243960 Hydrangea macrophylla HOM05D000955 ORTHO05D001429 3.0e-07 58.5 75 38.7
Peaxi162Scf00303g00141 Petunia axillaris HOM05D000955 ORTHO05D001429 3.0e-07 58.5 75 41.3
QL02p005168 Quercus lobata HOM05D000955 ORTHO05D001429 3.0e-07 58.5 70 38.6
Gohir.A06G018300 Gossypium hirsutum HOM05D000955 ORTHO05D001429 4.0e-07 58.2 67 44.8
CSS0046588 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D001429 5.2e-07 57.8 77 40.3
CSS0003971 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D001429 6.8e-07 57.4 75 41.3
CiPaw.15G059300 Carya illinoinensis HOM05D000955 ORTHO05D001429 6.8e-07 57.4 76 36.8
Gohir.D06G016400 Gossypium hirsutum HOM05D000955 ORTHO05D001429 6.8e-07 57.4 69 42.0
Gohir.D06G016500 Gossypium hirsutum HOM05D000955 ORTHO05D001429 6.8e-07 57.4 73 42.5
Gorai.010G019400 Gossypium raimondii HOM05D000955 ORTHO05D001429 6.8e-07 57.4 73 42.5
Sc15g0003450 Simmondsia chinensis HOM05D000955 ORTHO05D001429 6.8e-07 57.4 71 39.4
Atru.chr13.685 Acer truncatum HOM05D000955 ORTHO05D001429 8.9e-07 57.0 84 39.3
Thecc.08G008700 Theobroma cacao HOM05D000955 ORTHO05D001429 1.2e-06 56.6 69 40.6
CSS0012590 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D001429 1.5e-06 56.2 75 38.7
CSS0027110 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D001429 1.5e-06 56.2 75 40.0
COL.COLO4_08736 Corchorus olitorius HOM05D000955 ORTHO05D001429 1.5e-06 56.2 73 41.1
CSS0008676 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D001429 2.6e-06 55.5 75 38.7
Cfa018533 Carpinus fangiana HOM05D000955 ORTHO05D001429 2.6e-06 55.5 71 39.4
Manes.05G173200 Manihot esculenta HOM05D000955 ORTHO05D001429 2.6e-06 55.5 67 37.3
Actinidia22622 Actinidia chinensis HOM05D000955 ORTHO05D001429 3.4e-06 55.1 78 37.2
MELO3C016745.2 Cucumis melo HOM05D000955 ORTHO05D001429 3.4e-06 55.1 82 36.6
CsaV3_4G034250 Cucumis sativus L. HOM05D000955 ORTHO05D001429 3.4e-06 55.1 71 40.8
Gohir.D02G091700 Gossypium hirsutum HOM05D000955 ORTHO05D001429 3.4e-06 55.1 77 36.4
Gorai.005G102800 Gossypium raimondii HOM05D000955 ORTHO05D001429 3.4e-06 55.1 77 36.4
Gorai.010G019300 Gossypium raimondii HOM05D000955 ORTHO05D001429 3.4e-06 55.1 70 41.4
Lsat_1_v5_gn_4_125200 Lactuca sativa HOM05D000955 ORTHO05D001429 3.4e-06 55.1 70 41.4
Thecc.08G009300 Theobroma cacao HOM05D000955 ORTHO05D001429 3.4e-06 55.1 84 33.3
CSS0049247 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D001429 4.4e-06 54.7 75 38.7
COL.COLO4_26490 Corchorus olitorius HOM05D000955 ORTHO05D001429 4.4e-06 54.7 82 35.4
CSS0009132 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D001429 5.7e-06 54.3 75 38.7
Cfa018537 Carpinus fangiana HOM05D000955 ORTHO05D001429 5.7e-06 54.3 66 39.4
CiPaw.15G060000 Carya illinoinensis HOM05D000955 ORTHO05D001429 5.7e-06 54.3 71 35.2
CiPaw.16G045200 Carya illinoinensis HOM05D000955 ORTHO05D001429 5.7e-06 54.3 67 37.3
Manes.05G173300 Manihot esculenta HOM05D000955 ORTHO05D001429 5.7e-06 54.3 96 36.5
Manes.18G036300 Manihot esculenta HOM05D000955 ORTHO05D001429 5.7e-06 54.3 71 38.0
Thecc.08G009600 Theobroma cacao HOM05D000955 ORTHO05D001429 5.7e-06 54.3 74 35.1
QL02p005175 Quercus lobata HOM05D000955 ORTHO05D001429 7.5e-06 53.9 79 34.2
Sed0021895 Sechium edule HOM05D000955 ORTHO05D001429 7.5e-06 53.9 72 38.9
Thecc.08G009100 Theobroma cacao HOM05D000955 ORTHO05D001429 7.5e-06 53.9 67 38.8
Atru.chr13.662 Acer truncatum HOM05D000955 ORTHO05D001429 9.8e-06 53.5 81 34.6
CiPaw.16G045300 Carya illinoinensis HOM05D000955 ORTHO05D001429 9.8e-06 53.5 67 40.3
MELO3C010863.2 Cucumis melo HOM05D000955 ORTHO05D001429 9.8e-06 53.5 68 39.7
Lsat_1_v5_gn_4_125340 Lactuca sativa HOM05D000955 ORTHO05D001429 9.8e-06 53.5 70 40.0


User provided reference genes

Program Settings