Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.15G058600 Carya illinoinensis HOM05D000955 ORTHO05D001429 1.8e-44 182.2 92 100.0
CiPaw.15G058800 Carya illinoinensis HOM05D000955 ORTHO05D001429 4.5e-43 177.6 92 97.8
CiPaw.15G058100 Carya illinoinensis HOM05D000955 ORTHO05D001429 2.9e-42 174.9 92 94.6
CiPaw.15G058400 Carya illinoinensis HOM05D000955 ORTHO05D001429 1.6e-40 169.1 92 91.3
Cfa018543 Carpinus fangiana HOM05D000955 ORTHO05D001429 2.8e-16 88.6 78 53.8
QL02p005085 Quercus lobata HOM05D000955 ORTHO05D001429 8.8e-15 83.6 74 48.6
Atru.chr13.673 Acer truncatum HOM05D000955 ORTHO05D001429 2.7e-11 72.0 82 43.9
COL.COLO4_26501 Corchorus olitorius HOM05D000955 ORTHO05D001429 2.7e-11 72.0 75 48.0
Duzib093G0375 Durio zibethinus HOM05D000955 ORTHO05D001429 1.3e-10 69.7 83 43.4
COL.COLO4_08734 Corchorus olitorius HOM05D000955 ORTHO05D001429 3.8e-10 68.2 71 46.5
Thecc.08G008600 Theobroma cacao HOM05D000955 ORTHO05D001429 5.0e-10 67.8 78 43.6
CAN.G705.3 Capsicum annuum HOM05D000955 ORTHO05D001429 8.6e-10 67.0 79 41.8
Gohir.D01G107400 Gossypium hirsutum HOM05D000955 ORTHO05D001429 1.1e-09 66.6 77 41.6
Gorai.002G131800 Gossypium raimondii HOM05D000955 ORTHO05D001429 1.1e-09 66.6 77 41.6
COL.COLO4_17164 Corchorus olitorius HOM05D000955 ORTHO05D001429 1.5e-09 66.2 83 39.8
COL.COLO4_26493 Corchorus olitorius HOM05D000955 ORTHO05D001429 1.5e-09 66.2 71 45.1
Atru.chr13.675 Acer truncatum HOM05D000955 ORTHO05D001429 1.9e-09 65.9 82 40.2
Gohir.A01G119200 Gossypium hirsutum HOM05D000955 ORTHO05D001429 1.9e-09 65.9 77 40.3
Atru.chr13.660 Acer truncatum HOM05D000955 ORTHO05D001429 2.5e-09 65.5 78 42.3
Atru.chr13.674 Acer truncatum HOM05D000955 ORTHO05D001429 2.5e-09 65.5 70 45.7
CAN.G1938.3 Capsicum annuum HOM05D000955 ORTHO05D001429 2.5e-09 65.5 79 40.5
Duzib116G0476 Durio zibethinus HOM05D000955 ORTHO05D001429 3.3e-09 65.1 77 40.3
Thecc.04G032600 Theobroma cacao HOM05D000955 ORTHO05D001429 3.3e-09 65.1 69 46.4
CiPaw.15G058900 Carya illinoinensis HOM05D000955 ORTHO05D001429 4.3e-09 64.7 77 41.6
Thecc.04G032100 Theobroma cacao HOM05D000955 ORTHO05D001429 5.6e-09 64.3 68 45.6
QL02p005158 Quercus lobata HOM05D000955 ORTHO05D001429 7.3e-09 63.9 70 42.9
CiPaw.15G060100 Carya illinoinensis HOM05D000955 ORTHO05D001429 9.5e-09 63.5 78 39.7
Gohir.A06G018101 Gossypium hirsutum HOM05D000955 ORTHO05D001429 1.2e-08 63.2 70 44.3
Manes.18G036200 Manihot esculenta HOM05D000955 ORTHO05D001429 1.2e-08 63.2 69 43.5
Manes.18G036400 Manihot esculenta HOM05D000955 ORTHO05D001429 1.2e-08 63.2 69 42.0
QL02p005194 Quercus lobata HOM05D000955 ORTHO05D001429 1.2e-08 63.2 76 40.8
Dinv29919 Davidia involucrata HOM05D000955 ORTHO05D001429 1.6e-08 62.8 67 44.8
Peaxi162Scf00303g00141 Petunia axillaris HOM05D000955 ORTHO05D001429 1.6e-08 62.8 75 42.7
Gohir.A06G018300 Gossypium hirsutum HOM05D000955 ORTHO05D001429 2.1e-08 62.4 67 46.3
CiPaw.15G059300 Carya illinoinensis HOM05D000955 ORTHO05D001429 3.6e-08 61.6 76 38.2
Gohir.D06G016400 Gossypium hirsutum HOM05D000955 ORTHO05D001429 3.6e-08 61.6 69 43.5
Gohir.D06G016500 Gossypium hirsutum HOM05D000955 ORTHO05D001429 3.6e-08 61.6 73 43.8
Gorai.010G019400 Gossypium raimondii HOM05D000955 ORTHO05D001429 3.6e-08 61.6 73 43.8
Atru.chr13.685 Acer truncatum HOM05D000955 ORTHO05D001429 4.7e-08 61.2 84 40.5
Hma1.2p1_0982F.1_g243960 Hydrangea macrophylla HOM05D000955 ORTHO05D001429 4.7e-08 61.2 75 38.7
Thecc.04G031300 Theobroma cacao HOM05D000955 ORTHO05D001429 4.7e-08 61.2 78 39.7
CSS0046588 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D001429 8.0e-08 60.5 77 40.3
Thecc.08G009900 Theobroma cacao HOM05D000955 ORTHO05D001429 8.0e-08 60.5 78 37.2
CSS0003971 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D001429 1.0e-07 60.1 75 41.3
PGSC0003DMG400004460 Solanum tuberosum HOM05D000955 ORTHO05D001429 1.0e-07 60.1 77 40.3
Atru.chr13.684 Acer truncatum HOM05D000955 ORTHO05D001429 1.4e-07 59.7 67 43.3
QL02p005235 Quercus lobata HOM05D000955 ORTHO05D001429 1.4e-07 59.7 77 37.7
CiPaw.15G059000 Carya illinoinensis HOM05D000955 ORTHO05D001429 1.8e-07 59.3 81 38.3
Gorai.010G019300 Gossypium raimondii HOM05D000955 ORTHO05D001429 1.8e-07 59.3 70 42.9
Thecc.08G009300 Theobroma cacao HOM05D000955 ORTHO05D001429 1.8e-07 59.3 84 34.5
CSS0012590 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D001429 2.3e-07 58.9 75 38.7
CSS0027110 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D001429 2.3e-07 58.9 75 40.0
COL.COLO4_08736 Corchorus olitorius HOM05D000955 ORTHO05D001429 2.3e-07 58.9 73 41.1
QL02p005214 Quercus lobata HOM05D000023 ORTHO05D000014 2.3e-07 58.9 77 35.1
Manes.05G173300 Manihot esculenta HOM05D000955 ORTHO05D001429 3.0e-07 58.5 96 37.5
Sc15g0003450 Simmondsia chinensis HOM05D000955 ORTHO05D001429 3.0e-07 58.5 71 39.4
Thecc.08G008700 Theobroma cacao HOM05D000955 ORTHO05D001429 3.0e-07 58.5 69 40.6
CSS0008676 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D001429 4.0e-07 58.2 75 38.7
QL02p005168 Quercus lobata HOM05D000955 ORTHO05D001429 4.0e-07 58.2 70 38.6
Thecc.08G009100 Theobroma cacao HOM05D000955 ORTHO05D001429 4.0e-07 58.2 67 40.3
Actinidia22622 Actinidia chinensis HOM05D000955 ORTHO05D001429 5.2e-07 57.8 78 37.2
MELO3C016745.2 Cucumis melo HOM05D000955 ORTHO05D001429 5.2e-07 57.8 82 36.6
CsaV3_4G034250 Cucumis sativus L. HOM05D000955 ORTHO05D001429 5.2e-07 57.8 71 40.8
Lsat_1_v5_gn_4_125200 Lactuca sativa HOM05D000955 ORTHO05D001429 5.2e-07 57.8 70 41.4
Manes.18G036300 Manihot esculenta HOM05D000955 ORTHO05D001429 5.2e-07 57.8 71 39.4
CSS0049247 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D001429 6.8e-07 57.4 75 38.7
COL.COLO4_26490 Corchorus olitorius HOM05D000955 ORTHO05D001429 6.8e-07 57.4 82 35.4
Atru.chr13.677 Acer truncatum HOM05D000955 ORTHO05D001429 8.9e-07 57.0 75 41.3
CSS0009132 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D001429 8.9e-07 57.0 75 38.7
CAN.G371.22 Capsicum annuum HOM05D000955 ORTHO05D001429 8.9e-07 57.0 70 41.4
Cfa018537 Carpinus fangiana HOM05D000955 ORTHO05D001429 8.9e-07 57.0 66 39.4
Nitab4.5_0000686g0120 Nicotiana tabacum HOM05D000955 ORTHO05D001429 8.9e-07 57.0 77 36.4
Nitab4.5_0000686g0170 Nicotiana tabacum HOM05D000955 ORTHO05D001429 8.9e-07 57.0 77 37.7
Nitab4.5_0000686g0180 Nicotiana tabacum HOM05D000955 ORTHO05D001429 8.9e-07 57.0 77 36.4
Nitab4.5_0000686g0100 Nicotiana tabacum HOM05D000955 ORTHO05D001429 1.2e-06 56.6 74 37.8
Sopen04g032660 Solanum pennellii HOM05D000955 ORTHO05D001429 1.2e-06 56.6 70 40.0
CiPaw.15G059400 Carya illinoinensis HOM05D000955 ORTHO05D001429 1.5e-06 56.2 75 36.0
COL.COLO4_26496 Corchorus olitorius HOM05D000955 ORTHO05D001429 1.5e-06 56.2 70 38.6
Nitab4.5_0001101g0030 Nicotiana tabacum HOM05D000955 ORTHO05D001429 1.5e-06 56.2 70 40.0
Potri.014G030100 Populus trichocarpa HOM05D000955 ORTHO05D001429 1.5e-06 56.2 71 40.8
Sed0021895 Sechium edule HOM05D000955 ORTHO05D001429 1.5e-06 56.2 72 38.9
Peaxi162Scf00252g00112 Petunia axillaris HOM05D000955 ORTHO05D001429 2.0e-06 55.8 77 35.1
CiPaw.15G060000 Carya illinoinensis HOM05D000955 ORTHO05D001429 2.6e-06 55.5 71 35.2
CiPaw.16G045200 Carya illinoinensis HOM05D000955 ORTHO05D001429 2.6e-06 55.5 67 37.3
Ciclev10003536m.g Citrus clementina HOM05D000955 ORTHO05D001429 2.6e-06 55.5 66 40.9
Nitab4.5_0001847g0010 Nicotiana tabacum HOM05D000955 ORTHO05D001429 2.6e-06 55.5 70 38.6
CiPaw.15G059600 Carya illinoinensis HOM05D000955 ORTHO05D001429 3.4e-06 55.1 69 36.2
Prupe.1G436700 Prunus persica HOM05D000955 ORTHO05D001429 3.4e-06 55.1 84 34.5
QL02p005175 Quercus lobata HOM05D000955 ORTHO05D001429 3.4e-06 55.1 79 34.2
Atru.chr13.681 Acer truncatum HOM05D000955 ORTHO05D001429 4.4e-06 54.7 71 40.8
CAN.G371.24 Capsicum annuum HOM05D000955 ORTHO05D001429 4.4e-06 54.7 74 39.2
CiPaw.16G045300 Carya illinoinensis HOM05D000955 ORTHO05D001429 4.4e-06 54.7 67 40.3
MELO3C010863.2 Cucumis melo HOM05D000955 ORTHO05D001429 4.4e-06 54.7 68 39.7
Lsat_1_v5_gn_4_125340 Lactuca sativa HOM05D000955 ORTHO05D001429 4.4e-06 54.7 70 40.0
Nitab4.5_0008115g0010 Nicotiana tabacum HOM05D000955 ORTHO05D001429 4.4e-06 54.7 70 37.1
PGSC0003DMG400008043 Solanum tuberosum HOM05D000955 ORTHO05D001429 4.4e-06 54.7 63 41.3
Thecc.08G009600 Theobroma cacao HOM05D000955 ORTHO05D001429 4.4e-06 54.7 74 35.1
Atru.chr13.662 Acer truncatum HOM05D000955 ORTHO05D001429 5.7e-06 54.3 81 34.6
Atru.chr13.678 Acer truncatum HOM05D000955 ORTHO05D001429 5.7e-06 54.3 66 42.4
Prupe.1G436900 Prunus persica HOM05D000955 ORTHO05D001429 5.7e-06 54.3 72 37.5
Sed0024453 Sechium edule HOM05D000955 ORTHO05D001429 5.7e-06 54.3 72 37.5
Atru.chr13.682 Acer truncatum HOM05D000955 ORTHO05D001429 7.5e-06 53.9 80 37.5
Cfa018533 Carpinus fangiana HOM05D000955 ORTHO05D001429 7.5e-06 53.9 71 38.0
HanXRQChr09g0267701 Helianthus annuus HOM05D000955 ORTHO05D001429 7.5e-06 53.9 78 35.9
Prupe.1G437100 Prunus persica HOM05D000955 ORTHO05D001429 7.5e-06 53.9 72 36.1
QL02p005180 Quercus lobata HOM05D000955 ORTHO05D001429 7.5e-06 53.9 77 32.5
Thecc.08G008900 Theobroma cacao HOM05D000955 ORTHO05D001429 7.5e-06 53.9 75 38.7
Cfa018536 Carpinus fangiana HOM05D000955 ORTHO05D001429 9.8e-06 53.5 66 39.4
Gohir.D02G091500 Gossypium hirsutum HOM05D000955 ORTHO05D001429 9.8e-06 53.5 67 40.3
Gorai.005G102600 Gossypium raimondii HOM05D000955 ORTHO05D001429 9.8e-06 53.5 67 40.3
Lsat_1_v5_gn_6_113880 Lactuca sativa HOM05D000955 ORTHO05D001429 9.8e-06 53.5 72 36.1
Solyc12g088840.1 Solanum lycopersicum HOM05D000955 ORTHO05D001429 9.8e-06 53.5 77 33.8


User provided reference genes

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