Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.15G039400 Carya illinoinensis HOM05D006276 ORTHO05D007724 2.2e-148 528.9 259 100.0
CiPaw.16G028900 Carya illinoinensis HOM05D006276 ORTHO05D007724 6.9e-89 331.3 323 59.1
QL02p001268 Quercus lobata HOM05D006276 ORTHO05D007724 1.4e-86 323.6 323 54.8
GSVIVG01035412001 Vitis vinifera HOM05D006276 ORTHO05D007724 3.4e-80 302.4 331 49.2
Cfa017950 Carpinus fangiana HOM05D006276 ORTHO05D007724 9.9e-80 300.8 234 66.7
Dinv27981 Davidia involucrata HOM05D006276 ORTHO05D007724 1.4e-78 297.0 326 50.0
RcHm_v2.0_Chr6g0290791 Rosa chinensis HOM05D006276 ORTHO05D007724 1.6e-77 293.5 327 49.2
Potri.006G230000 Populus trichocarpa HOM05D006276 ORTHO05D007724 2.7e-77 292.7 323 52.0
Actinidia01190 Actinidia chinensis HOM05D006276 ORTHO05D007724 1.3e-76 290.4 324 49.4
RcHm_v2.0_Chr6g0310851 Rosa chinensis HOM05D006276 ORTHO05D007724 1.3e-76 290.4 327 49.5
MD08G1060900 Malus domestica HOM05D006276 ORTHO05D007724 1.8e-76 290.0 308 52.6
Ciclev10008931m.g Citrus clementina HOM05D006276 ORTHO05D007724 6.7e-76 288.1 332 49.1
Manes.16G079900 Manihot esculenta HOM05D006276 ORTHO05D007724 2.1e-74 283.1 324 50.3
MD15G1060500 Malus domestica HOM05D006276 ORTHO05D007724 4.8e-74 282.0 319 49.5
TAR383G0425 Trochodendron aralioides HOM05D006276 ORTHO05D007724 2.4e-73 279.6 330 48.5
FvH4_2g31970 Fragaria vesca HOM05D006276 ORTHO05D007724 1.2e-72 277.3 327 48.3
Duzib168G0463 Durio zibethinus HOM05D006276 ORTHO05D007724 7.6e-72 274.6 327 47.1
TAR626G0576 Trochodendron aralioides HOM05D006276 ORTHO05D007724 7.6e-72 274.6 332 45.8
Haze_18196 Corylus avellana HOM05D006276 ORTHO05D007724 1.7e-71 273.5 323 50.8
Hma1.2p1_0482F.1_g162490 Hydrangea macrophylla HOM05D006276 ORTHO05D007724 3.8e-71 272.3 326 45.1
Atru.chr7.1056 Acer truncatum HOM05D006276 ORTHO05D007724 6.4e-71 271.6 329 47.7
Sed0014483 Sechium edule HOM05D006276 ORTHO05D007724 6.4e-71 271.6 324 46.6
Actinidia18190 Actinidia chinensis HOM05D006276 ORTHO05D007724 1.4e-70 270.4 318 47.8
CANSAT25G3436 Cannabis sativa HOM05D006276 ORTHO05D007724 9.3e-70 267.7 323 47.7
COL.COLO4_21052 Corchorus olitorius HOM05D006276 ORTHO05D007724 2.7e-69 266.2 326 46.9
CsaV3_2G025580 Cucumis sativus L. HOM05D006276 ORTHO05D007724 5.1e-68 261.9 327 45.3
Gorai.009G045400 Gossypium raimondii HOM05D006276 ORTHO05D007724 2.5e-67 259.6 327 45.9
Thecc.09G053300 Theobroma cacao HOM05D006276 ORTHO05D007724 3.3e-67 259.2 332 44.6
Eucgr.C03044 Eucalyptus grandis HOM05D006276 ORTHO05D007724 4.3e-67 258.8 332 45.2
Actinidia14712 Actinidia chinensis HOM05D006276 ORTHO05D007724 7.4e-67 258.1 315 46.7
ClCG08G017020 Citrullus lanatus HOM05D006276 ORTHO05D007724 9.6e-67 257.7 327 45.0
Sabra06G0178200 Salix brachista HOM05D006276 ORTHO05D007724 2.1e-66 256.5 234 58.5
Ca_13170_v3 Cicer arietinum L. HOM05D006276 ORTHO05D007724 2.8e-66 256.1 315 47.3
Cc08_g10550 Coffea canephora HOM05D006276 ORTHO05D007724 2.8e-66 256.1 324 45.7
Glyma.17G229400 Glycine max HOM05D006276 ORTHO05D007724 2.8e-66 256.1 324 46.6
Lsat_1_v5_gn_3_24381 Lactuca sativa HOM05D006276 ORTHO05D007724 4.8e-66 255.4 322 44.7
Phvul.001G034700 Phaseolus vulgaris HOM05D006276 ORTHO05D007724 6.2e-66 255.0 325 45.5
VMungo0647G0182 Vigna mungo HOM05D006276 ORTHO05D007724 6.2e-66 255.0 325 46.5
HanXRQChr17g0538201 Helianthus annuus HOM05D006276 ORTHO05D007724 8.2e-66 254.6 320 43.8
arahy.Tifrunner.gnm1.ann1.PS3ZFP Arachis hypogaea HOM05D006276 ORTHO05D007724 1.1e-65 254.2 327 46.2
Lj5g0000642 Lotus japonicus HOM05D006276 ORTHO05D007724 1.1e-65 254.2 317 46.7
Lj7A273T8 Lonicera japonica HOM05D006276 ORTHO05D007724 1.4e-65 253.8 326 45.7
Cpa.g.sc7.176 Carica papaya HOM05D006276 ORTHO05D007724 3.1e-65 252.7 234 54.7
PGSC0003DMG400025517 Solanum tuberosum HOM05D006276 ORTHO05D007724 1.2e-64 250.8 326 42.6
Peaxi162Scf00247g00720 Petunia axillaris HOM05D006276 ORTHO05D007724 2.0e-64 250.0 325 44.0
arahy.Tifrunner.gnm1.ann1.C6FL8N Arachis hypogaea HOM05D006276 ORTHO05D007724 3.4e-64 249.2 326 45.1
Medtr1g016410 Medicago truncatula HOM05D006276 ORTHO05D007724 3.4e-64 249.2 318 45.6
Hund19457 Selenicereus undatus HOM05D006276 ORTHO05D007724 3.4e-64 249.2 325 44.0
Solyc11g070020.3 Solanum lycopersicum HOM05D006276 ORTHO05D007724 3.4e-64 249.2 326 42.6
Sopen11g028700 Solanum pennellii HOM05D006276 ORTHO05D007724 3.4e-64 249.2 326 42.6
TPR.G13142 Trifolium pratense HOM05D006276 ORTHO05D007724 7.6e-64 248.1 313 47.3
Rhsim07G0142500 Rhododendron simsii HOM05D006276 ORTHO05D007724 1.0e-63 247.7 324 44.1
DCAR_004430 Daucus carota HOM05D006276 ORTHO05D007724 2.9e-63 246.1 327 42.8
TWI34G0536 Tripterygium wilfordii HOM05D006276 ORTHO05D007724 6.5e-63 245.0 320 46.2
Nitab4.5_0003550g0010 Nicotiana tabacum HOM05D006276 ORTHO05D007724 1.1e-62 244.2 326 42.6
Sed0008348 Sechium edule HOM05D006276 ORTHO05D007724 1.1e-62 244.2 324 43.8
Nitab4.5_0001107g0140 Nicotiana tabacum HOM05D006276 ORTHO05D007724 2.5e-62 243.0 326 42.9
EL10Ac2g03891 Beta vulgaris HOM05D006276 ORTHO05D007724 4.6e-61 238.8 325 41.5
Lalb_Chr14g0367711 Lupinus albus HOM05D006276 ORTHO05D007724 7.9e-61 238.0 332 44.0
PSO210G2260 Papaver somniferum HOM05D006276 ORTHO05D007724 7.9e-61 238.0 330 44.2
PSO210G3453 Papaver somniferum HOM05D006276 ORTHO05D007724 1.0e-60 237.7 332 44.0
THA.LOC104811244 Tarenaya hassleriana HOM05D006276 ORTHO05D007724 3.9e-60 235.7 324 43.2
Gohir.D05G044300 Gossypium hirsutum HOM05D006276 ORTHO05D007724 1.1e-59 234.2 294 45.9
Oeu003983.2 Olea europaea HOM05D006276 ORTHO05D007724 9.7e-59 231.1 289 44.6
CSS0027263 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 2.2e-58 229.9 223 54.3
MSTRG.11659 Avicennia marina HOM05D006276 ORTHO05D007724 8.2e-58 228.0 324 40.7
FAN15G3491 Fragaria x ananassa HOM05D006276 ORTHO05D007724 2.4e-57 226.5 446 35.2
PSO478G1664 Papaver somniferum HOM05D006276 ORTHO05D007724 2.4e-57 226.5 341 41.3
Migut.E01562 Erythranthe guttata HOM05D006276 ORTHO05D007724 1.5e-56 223.8 322 41.3
Carub.0006s1034 Capsella rubella HOM05D006276 ORTHO05D007724 2.0e-56 223.4 316 41.1
Glyma.14G094000 Glycine max HOM05D006276 ORTHO05D007724 3.4e-56 222.6 228 52.6
AT5G11810 Arabidopsis thaliana HOM05D006276 ORTHO05D007724 4.5e-56 222.2 320 40.0
BraA03t09860Z Brassica rapa HOM05D006276 ORTHO05D007724 7.7e-56 221.5 316 41.8
AUR62022071 Chenopodium quinoa HOM05D006276 ORTHO05D007724 7.7e-56 221.5 321 41.4
Aqoxy5G01259 Aquilegia oxysepala HOM05D006276 ORTHO05D007724 2.2e-55 219.9 332 40.4
A03p05210 Brassica napus HOM05D006276 ORTHO05D007724 2.9e-55 219.5 316 42.1
vmacro14246 Vaccinium macrocarpon HOM05D006276 ORTHO05D007724 3.8e-55 219.2 227 51.5
SGA_v2.0_scaffold169G38688 Striga asiatica HOM05D006276 ORTHO05D007724 6.5e-55 218.4 324 38.9
PSO782G4309 Papaver somniferum HOM05D006276 ORTHO05D007724 1.9e-54 216.9 301 43.9
Thhalv10014178m.g Eutrema salsugineum HOM05D006276 ORTHO05D007724 3.2e-54 216.1 323 40.2
C03p06010 Brassica napus HOM05D006276 ORTHO05D007724 1.2e-53 214.2 316 40.5
BraA10t44656Z Brassica rapa HOM05D006276 ORTHO05D007724 2.1e-53 213.4 317 40.4
A10p25940 Brassica napus HOM05D006276 ORTHO05D007724 3.6e-53 212.6 317 40.1
Sp6g31790 Schrenkiella parvula HOM05D006276 ORTHO05D007724 4.6e-53 212.2 316 41.1
FAN24G2654 Fragaria x ananassa HOM05D006276 ORTHO05D007724 6.1e-53 211.8 298 42.6
Nn3g20166 Nelumbo nucifera HOM05D006276 ORTHO05D007724 1.0e-52 211.1 234 46.2
CDE06G0120 Ceratophyllum demersum HOM05D006276 ORTHO05D007724 3.0e-52 209.5 335 40.3
SalBow1G4959 Salvia bowleyana HOM05D006276 ORTHO05D007724 5.1e-52 208.8 337 38.6
BolC3t13112H Brassica oleracea HOM05D006276 ORTHO05D007724 2.5e-51 206.5 316 39.2
CARHR201350 Cardamine hirsuta HOM05D006276 ORTHO05D007724 5.7e-51 205.3 224 47.8
C09p65020 Brassica napus HOM05D006276 ORTHO05D007724 1.3e-50 204.1 317 39.7
BolC9t59330H Brassica oleracea HOM05D006276 ORTHO05D007724 1.7e-50 203.8 317 39.1
AUR62009155 Chenopodium quinoa HOM05D006276 ORTHO05D007724 3.7e-50 202.6 345 38.0
FAN20G3006 Fragaria x ananassa HOM05D006276 ORTHO05D007724 6.3e-50 201.8 280 45.0
BcaC04g19193 Brassica carinata HOM05D006276 ORTHO05D007724 1.1e-49 201.1 319 38.9
Ah.10g034420 Amaranthus hybridus HOM05D006276 ORTHO05D007724 1.4e-49 200.7 259 42.9
Lj7P276T14 Lonicera japonica HOM05D006276 ORTHO05D007724 5.3e-49 198.7 173 57.8
AL6G22560 Arabidopsis lyrata HOM05D006276 ORTHO05D007724 2.0e-48 196.8 228 44.3
SHI18737 Sapria himalayana HOM05D006276 ORTHO05D007724 1.7e-47 193.7 316 37.7
MELO3C010755.2 Cucumis melo HOM05D006276 ORTHO05D007724 2.2e-47 193.4 331 39.0
BcaB01g05452 Brassica carinata HOM05D006276 ORTHO05D007724 6.5e-47 191.8 316 39.6
FAN27G2524 Fragaria x ananassa HOM05D006276 ORTHO05D007724 1.1e-46 191.0 352 36.4
HPP92_004831 Vanilla planifolia HOM05D006276 ORTHO05D007724 2.5e-46 189.9 332 36.4
Prupe.1G412500 Prunus persica HOM05D006276 ORTHO05D007724 1.0e-44 184.5 260 44.6
Aa31LG3G15390 Aethionema arabicum HOM05D006276 ORTHO05D007724 3.9e-44 182.6 327 36.1
CDE04G1132 Ceratophyllum demersum HOM05D000032 ORTHO05D002561 1.5e-43 180.6 236 46.2
Sc09g0009760 Simmondsia chinensis HOM05D006276 ORTHO05D007724 3.7e-42 176.0 298 36.9
Gohir.A05G042600 Gossypium hirsutum HOM05D006276 ORTHO05D007724 2.6e-40 169.9 267 40.8
unitig_26.g10141 Utricularia gibba HOM05D003606 ORTHO05D004650 1.3e-39 167.5 225 40.9
Os02g0135600 Oryza sativa ssp. japonica HOM05D006276 ORTHO05D007724 5.0e-39 165.6 234 42.3
PGR044G2277 Punica granatum HOM05D006276 ORTHO05D007724 1.9e-38 163.7 271 39.9
Zm00001eb231620 Zea mays HOM05D006276 ORTHO05D007724 2.5e-38 163.3 233 40.3
Psat6g020720 Pisum sativum HOM05D006276 ORTHO05D007724 5.5e-38 162.2 202 45.5
ATR0564G292 Amborella trichopoda HOM05D006276 ORTHO05D007724 1.4e-36 157.5 308 35.4
AagrBONN_evm.TU.Sc2ySwM_117.3789 Anthoceros agrestis HOM05D006276 ORTHO05D007724 1.0e-31 141.4 344 29.9
Mapoly0103s0015 Marchantia polymorpha HOM05D006276 ORTHO05D007724 6.8e-28 128.6 327 27.8
Pp3c1_29470 Physcomitrium patens HOM05D006276 ORTHO05D007724 3.4e-27 126.3 331 29.3
PSO210G7329 Papaver somniferum HOM05D006276 ORTHO05D007724 5.7e-27 125.6 156 48.7
SEGI_30057 Sequoiadendron giganteum HOM05D006276 ORTHO05D007724 7.5e-27 125.2 317 28.4
Pp3c14_20160 Physcomitrium patens HOM05D006276 ORTHO05D007724 2.0e-24 117.1 326 29.4
Thecc.08G113900 Theobroma cacao HOM05D006276 ORTHO05D007724 3.0e-20 103.2 193 38.3
Oeu018645.1 Olea europaea HOM05D006276 ORTHO05D007724 1.1e-17 94.7 55 74.5
SMO117G0325 Selaginella moellendorffii HOM05D006276 ORTHO05D007724 7.0e-17 92.0 319 25.7
CSS0023315 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 9.2e-09 65.1 44 70.5
CSS0029180 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 9.2e-09 65.1 44 70.5
CARHR201360 Cardamine hirsuta HOM05D006276 ORTHO05D007724 2.5e-06 57.0 44 63.6
Cre06.g285850 Chlamydomonas reinhardtii HOM05D006276 ORTHO05D007724 3.3e-06 56.6 56 46.4


User provided reference genes

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