Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.15G038100 Carya illinoinensis HOM05D006192 ORTHO05D008003 7.8e-288 993.0 483 100.0
Haze_18173 Corylus avellana HOM05D006192 ORTHO05D008003 1.2e-259 899.4 483 89.9
Cfa017964 Carpinus fangiana HOM05D006192 ORTHO05D008003 2.9e-258 894.8 483 89.0
QL02p001073 Quercus lobata HOM05D006192 ORTHO05D008003 2.5e-254 881.7 482 88.0
FAN27G0797 Fragaria x ananassa HOM05D006192 ORTHO05D008003 4.8e-245 850.9 483 84.5
Dinv22891 Davidia involucrata HOM05D006192 ORTHO05D008003 1.4e-244 849.4 483 85.1
Dinv27994 Davidia involucrata HOM05D006192 ORTHO05D008003 1.4e-244 849.4 483 84.9
FAN15G2167 Fragaria x ananassa HOM05D006192 ORTHO05D008003 1.4e-244 849.4 483 84.3
FAN20G2998 Fragaria x ananassa HOM05D006192 ORTHO05D008003 4.1e-244 847.8 483 84.3
Thecc.09G055000 Theobroma cacao HOM05D006192 ORTHO05D008003 4.1e-244 847.8 482 83.8
FvH4_2g31750 Fragaria vesca HOM05D006192 ORTHO05D008003 9.1e-244 846.7 483 83.9
Prupe.1G411000 Prunus persica HOM05D006192 ORTHO05D008003 2.0e-243 845.5 483 83.4
FAN24G0058 Fragaria x ananassa HOM05D006192 ORTHO05D008003 3.4e-243 844.7 483 83.4
Potri.006G228000 Populus trichocarpa HOM05D006192 ORTHO05D008003 5.9e-243 844.0 483 84.3
Duzib187G0943 Durio zibethinus HOM05D006192 ORTHO05D008003 1.0e-242 843.2 482 84.2
Gohir.A05G041700 Gossypium hirsutum HOM05D006192 ORTHO05D008003 1.7e-242 842.4 482 83.2
Actinidia30319 Actinidia chinensis HOM05D006192 ORTHO05D008003 3.8e-242 841.3 483 84.5
CSS0041370 Camellia sinensis var. sinensis HOM05D006192 ORTHO05D008003 3.2e-241 838.2 483 83.4
COL.COLO4_21071 Corchorus olitorius HOM05D006192 ORTHO05D008003 3.2e-241 838.2 482 83.2
Gorai.009G044500 Gossypium raimondii HOM05D006192 ORTHO05D008003 1.0e-239 833.2 482 82.6
Manes.03G048700 Manihot esculenta HOM05D006192 ORTHO05D008003 1.0e-239 833.2 487 82.8
RcHm_v2.0_Chr6g0311071 Rosa chinensis HOM05D006192 ORTHO05D008003 1.8e-239 832.4 483 83.0
TWI34G1683 Tripterygium wilfordii HOM05D006192 ORTHO05D008003 3.0e-239 831.6 483 83.0
Gohir.D05G043400 Gossypium hirsutum HOM05D006192 ORTHO05D008003 1.5e-238 829.3 482 81.5
Nn7g37295 Nelumbo nucifera HOM05D006192 ORTHO05D008003 3.3e-238 828.2 483 82.6
MD15G1058400 Malus domestica HOM05D006192 ORTHO05D008003 1.3e-237 826.2 484 81.8
Lj7A269G19 Lonicera japonica HOM05D006192 ORTHO05D008003 4.8e-237 824.3 483 81.8
CsaV3_4G035660 Cucumis sativus L. HOM05D006192 ORTHO05D008003 6.3e-237 823.9 484 82.9
Ciclev10008149m.g Citrus clementina HOM05D006192 ORTHO05D008003 6.9e-236 820.5 483 81.8
ClCG05G017890 Citrullus lanatus HOM05D006192 ORTHO05D008003 1.2e-235 819.7 484 82.6
MELO3C016873.2 Cucumis melo HOM05D006192 ORTHO05D008003 2.0e-235 818.9 484 82.4
Eucgr.C00658 Eucalyptus grandis HOM05D006192 ORTHO05D008003 3.8e-234 814.7 484 81.2
Rhsim07G0125300 Rhododendron simsii HOM05D006192 ORTHO05D008003 5.5e-233 810.8 483 81.4
Sabra06G0176500 Salix brachista HOM05D006192 ORTHO05D008003 7.2e-233 810.4 514 77.8
PSO339G5117 Papaver somniferum HOM05D006192 ORTHO05D008003 1.4e-231 806.2 489 80.2
PSO384G1492 Papaver somniferum HOM05D006192 ORTHO05D008003 3.9e-231 804.7 489 80.0
Sed0014899 Sechium edule HOM05D006192 ORTHO05D008003 3.9e-231 804.7 484 80.6
arahy.Tifrunner.gnm1.ann1.S5W95P Arachis hypogaea HOM05D006192 ORTHO05D008003 8.8e-231 803.5 483 80.5
Glyma.03G131100 Glycine max HOM05D006192 ORTHO05D008003 2.0e-230 802.4 481 81.3
Glyma.19G133100 Glycine max HOM05D006192 ORTHO05D008003 2.6e-230 802.0 484 81.2
Sc01g0008030 Simmondsia chinensis HOM05D006192 ORTHO05D008003 3.3e-230 801.6 483 80.3
Oeu003988.1 Olea europaea HOM05D006192 ORTHO05D008003 4.4e-230 801.2 483 79.9
Cc08_g10700 Coffea canephora HOM05D006192 ORTHO05D008003 5.7e-230 800.8 485 79.6
arahy.Tifrunner.gnm1.ann1.44XN4P Arachis hypogaea HOM05D006192 ORTHO05D008003 1.7e-229 799.3 483 80.1
EL10Ac2g03859 Beta vulgaris HOM05D006192 ORTHO05D008003 2.2e-229 798.9 483 79.9
AUR62039119 Chenopodium quinoa HOM05D006192 ORTHO05D008003 3.7e-229 798.1 483 81.2
AUR62043945 Chenopodium quinoa HOM05D006192 ORTHO05D008003 3.7e-229 798.1 483 81.2
Oeu009349.1 Olea europaea HOM05D006192 ORTHO05D008003 1.8e-228 795.8 483 78.9
Medtr7g090510 Medicago truncatula HOM05D006192 ORTHO05D008003 3.1e-228 795.0 484 79.3
Lalb_Chr20g0110241 Lupinus albus HOM05D006192 ORTHO05D008003 4.1e-228 794.7 481 80.9
VMungo1383G3565 Vigna mungo HOM05D006192 ORTHO05D008003 4.1e-228 794.7 485 80.6
Ah.11g044810 Amaranthus hybridus HOM05D006192 ORTHO05D008003 5.3e-228 794.3 483 80.3
AUR62009135 Chenopodium quinoa HOM05D006192 ORTHO05D008003 7.0e-228 793.9 483 80.3
TPR.G32742 Trifolium pratense HOM05D006192 ORTHO05D008003 1.7e-226 789.3 484 78.5
PGSC0003DMG400019063 Solanum tuberosum HOM05D006192 ORTHO05D008003 2.9e-226 788.5 483 79.1
MBI16_g06012_MAGBIO Magnolia biondii HOM05D006192 ORTHO05D008003 3.8e-226 788.1 485 79.4
Phvul.001G127100 Phaseolus vulgaris HOM05D006192 ORTHO05D008003 1.1e-225 786.6 484 79.1
CANSAT25G1130 Cannabis sativa HOM05D006192 ORTHO05D008003 2.5e-225 785.4 483 79.3
DCAR_000802 Daucus carota HOM05D006192 ORTHO05D008003 5.5e-225 784.3 486 78.8
Sopen08g018650 Solanum pennellii HOM05D006192 ORTHO05D008003 5.5e-225 784.3 483 78.5
PGR031G3391 Punica granatum HOM05D006192 ORTHO05D008003 9.4e-225 783.5 489 79.8
THA.LOC104818573 Tarenaya hassleriana HOM05D006192 ORTHO05D008003 1.2e-224 783.1 483 79.1
Ca_08416_v3 Cicer arietinum L. HOM05D006192 ORTHO05D008003 1.6e-224 782.7 481 78.2
Hund19447 Selenicereus undatus HOM05D006192 ORTHO05D008003 2.7e-224 781.9 483 79.1
Peaxi162Scf00327g00612 Petunia axillaris HOM05D006192 ORTHO05D008003 2.3e-223 778.9 484 77.9
Solyc08g063080.3 Solanum lycopersicum HOM05D006192 ORTHO05D008003 2.3e-223 778.9 483 77.8
Nitab4.5_0002829g0050 Nicotiana tabacum HOM05D006192 ORTHO05D008003 3.0e-223 778.5 483 77.8
Nitab4.5_0005436g0010 Nicotiana tabacum HOM05D006192 ORTHO05D008003 5.2e-223 777.7 483 78.1
Lj1g0026013 Lotus japonicus HOM05D006192 ORTHO05D008003 6.7e-223 777.3 484 78.1
Psat3g076360 Pisum sativum HOM05D006192 ORTHO05D008003 6.7e-223 777.3 482 78.2
HanXRQChr06g0173891 Helianthus annuus HOM05D006192 ORTHO05D008003 1.5e-222 776.2 486 78.8
Migut.A00129 Erythranthe guttata HOM05D006192 ORTHO05D008003 2.0e-222 775.8 485 77.3
Lsat_1_v5_gn_3_23900 Lactuca sativa HOM05D006192 ORTHO05D008003 2.0e-222 775.8 484 79.1
CAN.G9.23 Capsicum annuum HOM05D006192 ORTHO05D008003 4.8e-221 771.2 483 77.4
SalBow4G2073 Salvia bowleyana HOM05D006192 ORTHO05D008003 5.9e-219 764.2 484 76.9
ECA246G2418 Erigeron canadensis HOM05D006192 ORTHO05D008003 1.3e-218 763.1 483 76.8
MSTRG.25952 Avicennia marina HOM05D006192 ORTHO05D008003 1.1e-217 760.0 417 87.1
SalBow5G1678 Salvia bowleyana HOM05D006192 ORTHO05D008003 1.9e-217 759.2 484 76.7
GSVIVG01035394001 Vitis vinifera HOM05D006192 ORTHO05D008003 2.5e-217 758.8 486 77.0
Sp7g30790 Schrenkiella parvula HOM05D006192 ORTHO05D008003 9.8e-214 746.9 484 75.4
SGA_v2.0_scaffold20G09220 Striga asiatica HOM05D006192 ORTHO05D008003 9.8e-214 746.9 485 75.7
AT4G33030 Arabidopsis thaliana HOM05D006192 ORTHO05D008003 1.7e-213 746.1 483 75.2
CARHR241040 Cardamine hirsuta HOM05D006192 ORTHO05D008003 1.7e-213 746.1 485 75.3
Thhalv10025085m.g Eutrema salsugineum HOM05D006192 ORTHO05D008003 2.8e-213 745.3 487 74.9
AL7G18640 Arabidopsis lyrata HOM05D006192 ORTHO05D008003 1.8e-212 742.7 484 75.0
Os05g0387200 Oryza sativa ssp. japonica HOM05D006192 ORTHO05D008003 7.0e-212 740.7 485 76.1
Zm00001eb347070 Zea mays HOM05D006192 ORTHO05D008003 7.0e-212 740.7 485 76.3
Carub.0007s0745 Capsella rubella HOM05D006192 ORTHO05D008003 1.6e-211 739.6 483 74.7
C01p05650 Brassica napus HOM05D006192 ORTHO05D008003 1.2e-208 729.9 485 74.4
BolC1t00544H Brassica oleracea HOM05D006192 ORTHO05D008003 1.2e-208 729.9 485 74.4
BraA01t00499Z Brassica rapa HOM05D006192 ORTHO05D008003 1.4e-207 726.5 393 86.8
BcaC09g52100 Brassica carinata HOM05D006192 ORTHO05D008003 1.8e-207 726.1 396 86.1
A01p05160 Brassica napus HOM05D006192 ORTHO05D008003 2.3e-207 725.7 396 86.1
A03p61760 Brassica napus HOM05D006192 ORTHO05D008003 5.2e-207 724.5 395 86.1
BraA03t15213Z Brassica rapa HOM05D006192 ORTHO05D008003 1.2e-206 723.4 486 73.9
C07p59470 Brassica napus HOM05D006192 ORTHO05D008003 2.0e-206 722.6 490 73.5
BolC7t46390H Brassica oleracea HOM05D006192 ORTHO05D008003 2.0e-206 722.6 393 86.3
Aa31LG4G11110 Aethionema arabicum HOM05D006192 ORTHO05D008003 5.9e-203 711.1 486 73.5
ATR0307G063 Amborella trichopoda HOM05D006192 ORTHO05D008003 3.6e-200 701.8 447 77.9
HPP92_006663 Vanilla planifolia HOM05D006192 ORTHO05D008003 4.9e-197 691.4 447 76.1
CBR_g23789 Chara braunii HOM05D006192 ORTHO05D008003 9.5e-193 677.2 423 76.4
TAR369G0638 Trochodendron aralioides HOM05D006192 ORTHO05D008003 8.9e-191 670.6 383 84.1
Pp3c10_9630 Physcomitrium patens HOM05D006192 ORTHO05D008003 7.5e-190 667.5 496 66.9
BcaNung02151 Brassica carinata HOM05D006192 ORTHO05D008003 3.2e-188 662.1 490 69.0
Mapoly0010s0049 Marchantia polymorpha HOM05D006192 ORTHO05D008003 9.2e-188 660.6 485 67.4
SMO239G0161 Selaginella moellendorffii HOM05D006192 ORTHO05D008003 1.2e-187 660.2 400 78.2
AagrBONN_evm.TU.Sc2ySwM_368.1072 Anthoceros agrestis HOM05D006192 ORTHO05D008003 1.6e-187 659.8 389 78.1
Cre16.g656400 Chlamydomonas reinhardtii HOM05D006192 ORTHO05D008003 4.4e-174 615.1 392 73.2
SalBow5G5187 Salvia bowleyana HOM05D006192 ORTHO05D008003 3.5e-171 605.5 431 70.5
MCO15G376 Micromonas commoda HOM05D006192 ORTHO05D008003 5.8e-166 588.2 389 68.1
unitig_748.g7527 Utricularia gibba HOM05D006192 ORTHO05D008003 3.5e-163 578.9 484 62.6
PRCOL_00003517 Prasinoderma coloniale HOM05D006192 ORTHO05D008003 1.9e-161 573.2 391 66.0
Atru.chr7.1090 Acer truncatum HOM05D006192 ORTHO05D008003 6.0e-155 551.6 289 90.3
Lj7A268T22 Lonicera japonica HOM05D006192 ORTHO05D008003 3.0e-154 549.3 289 90.7
CDE02G3162 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 8.2e-144 514.6 341 73.6
SEGI_22284 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 8.2e-136 488.0 364 67.3
CDE04G0209 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 2.2e-104 383.6 246 75.6
SalBow8G2204 Salvia bowleyana HOM05D006192 ORTHO05D008003 2.5e-100 370.2 237 76.4
CDE04G3367 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 3.6e-83 313.2 172 83.7
SalBow8G3463 Salvia bowleyana HOM05D006192 ORTHO05D008003 6.6e-61 239.2 196 62.2
MD08G1063500 Malus domestica HOM05D006192 ORTHO05D008003 7.3e-60 235.7 130 84.6
SEGI_03729 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 3.1e-58 230.3 139 79.9
SalBow8G1594 Salvia bowleyana HOM05D006192 ORTHO05D008003 8.4e-56 222.2 135 77.8
Atru.chr7.1089 Acer truncatum HOM05D006192 ORTHO05D008003 1.1e-52 211.8 157 65.6
SalBow5G3520 Salvia bowleyana HOM05D000200 ORTHO05D000262 3.0e-45 187.2 140 67.9
SalBow4G3004 Salvia bowleyana HOM05D006192 ORTHO05D001699 2.4e-34 151.0 94 75.5
SalBow8G4783 Salvia bowleyana HOM05D006192 ORTHO05D358531 6.7e-29 132.9 105 61.0
BcaC01g05298 Brassica carinata HOM05D006192 ORTHO05D091607 1.7e-11 75.1 59 61.0
Mapoly0073s0028 Marchantia polymorpha HOM05D000739 ORTHO05D001171 1.8e-10 71.6 439 23.9
Pp3c8_24460 Physcomitrium patens HOM05D000776 ORTHO05D001624 5.3e-10 70.1 294 23.8
Mapoly0065s0029 Marchantia polymorpha HOM05D000776 ORTHO05D001624 7.2e-07 59.7 125 31.2
HPP92_013398 Vanilla planifolia HOM05D000776 ORTHO05D001624 7.2e-07 59.7 128 30.5
Mapoly0068s0034 Marchantia polymorpha HOM05D000776 ORTHO05D001624 1.2e-06 58.9 125 30.4
FAN08G0150 Fragaria x ananassa HOM05D000776 ORTHO05D001624 7.9e-06 56.2 126 27.8


User provided reference genes

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