Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.15G011600 Carya illinoinensis HOM05D007043 ORTHO05D008951 8.7e-102 373.6 188 100.0
Cfa018265 Carpinus fangiana HOM05D007043 ORTHO05D008951 5.9e-82 307.8 193 79.8
QL02p036540 Quercus lobata HOM05D007043 ORTHO05D008951 7.7e-82 307.4 192 80.2
QL02p037061 Quercus lobata HOM05D007043 ORTHO05D008951 7.7e-82 307.4 191 80.6
Haze_17823 Corylus avellana HOM05D007043 ORTHO05D008951 9.4e-80 300.4 187 80.7
Potri.005G198400 Populus trichocarpa HOM05D007043 ORTHO05D008951 9.4e-80 300.4 187 79.1
ClCG08G007230 Citrullus lanatus HOM05D007043 ORTHO05D008951 1.6e-79 299.7 187 78.6
Ciclev10002599m.g Citrus clementina HOM05D007043 ORTHO05D008951 3.6e-79 298.5 187 80.2
Sed0011039 Sechium edule HOM05D007043 ORTHO05D008951 1.0e-78 297.0 185 78.4
Duzib093G0431 Durio zibethinus HOM05D007043 ORTHO05D008951 4.0e-78 295.0 187 78.6
MELO3C019966.2 Cucumis melo HOM05D007043 ORTHO05D008951 6.7e-78 294.3 187 77.5
FAN20G1550 Fragaria x ananassa HOM05D007043 ORTHO05D008951 2.6e-77 292.4 187 76.5
RcHm_v2.0_Chr6g0273931 Rosa chinensis HOM05D007043 ORTHO05D008951 2.6e-77 292.4 187 77.5
FAN24G2827 Fragaria x ananassa HOM05D007043 ORTHO05D008951 3.3e-77 292.0 187 76.5
CsaV3_6G004900 Cucumis sativus L. HOM05D007043 ORTHO05D008951 4.4e-77 291.6 187 77.0
FAN15G1248 Fragaria x ananassa HOM05D007043 ORTHO05D008951 5.7e-77 291.2 187 76.5
Eucgr.F02676 Eucalyptus grandis HOM05D007043 ORTHO05D008951 2.8e-76 288.9 188 74.5
Atru.chr13.1985 Acer truncatum HOM05D007043 ORTHO05D008951 4.8e-76 288.1 188 76.6
CDE05G0687 Ceratophyllum demersum HOM05D007043 ORTHO05D008951 4.8e-76 288.1 186 74.7
Gohir.A06G112300 Gossypium hirsutum HOM05D007043 ORTHO05D008951 4.8e-76 288.1 187 75.4
Prupe.8G043500 Prunus persica HOM05D007043 ORTHO05D008951 6.3e-76 287.7 187 74.3
TAR625G0503 Trochodendron aralioides HOM05D007043 ORTHO05D008951 1.1e-75 287.0 187 74.3
GSVIVG01013701001 Vitis vinifera HOM05D007043 ORTHO05D008951 1.1e-75 287.0 182 76.9
TWI60G1299 Tripterygium wilfordii HOM05D007043 ORTHO05D008951 1.8e-75 286.2 183 75.4
Aqoxy5G02008 Aquilegia oxysepala HOM05D007043 ORTHO05D008951 2.4e-75 285.8 186 75.3
Glyma.10G220400 Glycine max HOM05D007043 ORTHO05D008951 3.1e-75 285.4 186 73.1
THA.LOC104800095 Tarenaya hassleriana HOM05D007043 ORTHO05D008951 7.0e-75 284.3 183 74.9
Peaxi162Scf00360g00918 Petunia axillaris HOM05D007043 ORTHO05D008951 1.6e-74 283.1 189 72.5
Glyma.20G171100 Glycine max HOM05D007043 ORTHO05D008951 2.0e-74 282.7 186 73.1
Thecc.08G163200 Theobroma cacao HOM05D007043 ORTHO05D008951 3.5e-74 282.0 187 74.9
Cc10_g06450 Coffea canephora HOM05D007043 ORTHO05D008951 5.9e-74 281.2 192 71.9
Phvul.007G084700 Phaseolus vulgaris HOM05D007043 ORTHO05D008951 7.7e-74 280.8 187 73.8
VMungo0720G3009 Vigna mungo HOM05D007043 ORTHO05D008951 7.7e-74 280.8 187 73.3
Gohir.D06G116500 Gossypium hirsutum HOM05D007043 ORTHO05D008951 1.7e-73 279.6 187 73.3
Gorai.010G134300 Gossypium raimondii HOM05D007043 ORTHO05D008951 1.7e-73 279.6 187 73.3
MD10G1037900 Malus domestica HOM05D007043 ORTHO05D008951 1.7e-73 279.6 189 72.0
SalBow6G0078 Salvia bowleyana HOM05D007043 ORTHO05D008951 1.7e-73 279.6 186 74.2
arahy.Tifrunner.gnm1.ann1.7K1R9Z Arachis hypogaea HOM05D007043 ORTHO05D008951 2.9e-73 278.9 187 74.9
Hma1.2p1_0678F.1_g202140 Hydrangea macrophylla HOM05D007043 ORTHO05D008951 2.9e-73 278.9 190 70.5
Solyc04g072039.1 Solanum lycopersicum HOM05D007043 ORTHO05D008951 2.9e-73 278.9 200 67.5
CAN.G1183.21 Capsicum annuum HOM05D007043 ORTHO05D008951 5.0e-73 278.1 201 68.7
MD05G1035600 Malus domestica HOM05D007043 ORTHO05D008951 6.5e-73 277.7 189 72.0
PSO170G2334 Papaver somniferum HOM05D007043 ORTHO05D008951 6.5e-73 277.7 191 70.7
Sopen04g028120 Solanum pennellii HOM05D007043 ORTHO05D008951 1.1e-72 276.9 200 67.0
arahy.Tifrunner.gnm1.ann1.T4LNKK Arachis hypogaea HOM05D007043 ORTHO05D008951 1.9e-72 276.2 187 73.8
Cpa.g.sc26.119 Carica papaya HOM05D007043 ORTHO05D008951 1.9e-72 276.2 187 73.3
HanXRQChr11g0320161 Helianthus annuus HOM05D007043 ORTHO05D008951 2.5e-72 275.8 191 69.6
Medtr1g097460 Medicago truncatula HOM05D007043 ORTHO05D008951 3.2e-72 275.4 187 71.7
PGSC0003DMG400025055 Solanum tuberosum HOM05D007043 ORTHO05D008951 5.5e-72 274.6 202 66.8
Psat6g189600 Pisum sativum HOM05D007043 ORTHO05D008951 2.7e-71 272.3 186 72.0
PSO210G5925 Papaver somniferum HOM05D007043 ORTHO05D008951 4.7e-71 271.6 191 69.1
Migut.N02945 Erythranthe guttata HOM05D007043 ORTHO05D008951 8.0e-71 270.8 186 69.9
Hund26674 Selenicereus undatus HOM05D007043 ORTHO05D008951 1.0e-70 270.4 183 69.4
unitig_52.g17176 Utricularia gibba HOM05D007043 ORTHO05D008951 1.0e-70 270.4 184 69.0
ATR1120G076 Amborella trichopoda HOM05D007043 ORTHO05D008951 5.2e-70 268.1 186 69.9
Lalb_Chr02g0141621 Lupinus albus HOM05D007043 ORTHO05D008951 5.2e-70 268.1 184 70.7
AUR62034911 Chenopodium quinoa HOM05D007043 ORTHO05D008951 6.8e-70 267.7 186 68.8
Nitab4.5_0003178g0080 Nicotiana tabacum HOM05D007043 ORTHO05D008951 6.8e-70 267.7 193 70.5
Lj5g0012506 Lotus japonicus HOM05D007043 ORTHO05D008951 1.2e-69 266.9 186 68.8
Aa31LG4G8890 Aethionema arabicum HOM05D007043 ORTHO05D008951 2.0e-69 266.2 187 70.1
CSS0028309 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 3.4e-69 265.4 190 69.5
ECA232G2240 Erigeron canadensis HOM05D007043 ORTHO05D008951 4.4e-69 265.0 182 68.7
CARHR291040 Cardamine hirsuta HOM05D007043 ORTHO05D008951 5.7e-69 264.6 185 69.2
CSS0014664 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 9.8e-69 263.8 190 68.9
AUR62026618 Chenopodium quinoa HOM05D007043 ORTHO05D008951 9.8e-69 263.8 183 68.9
Os05g0182201 Oryza sativa ssp. japonica HOM05D007043 ORTHO05D008951 1.7e-68 263.1 180 71.7
vmacro21135 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 1.7e-68 263.1 194 68.6
vmacro22650 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 1.7e-68 263.1 194 68.6
Ah.05g168310 Amaranthus hybridus HOM05D007043 ORTHO05D008951 4.8e-68 261.5 188 67.6
Carub.0002s1851 Capsella rubella HOM05D007043 ORTHO05D008951 4.8e-68 261.5 185 67.0
Thhalv10019190m.g Eutrema salsugineum HOM05D007043 ORTHO05D008951 4.8e-68 261.5 185 69.2
A07p37900 Brassica napus HOM05D007043 ORTHO05D008951 4.1e-67 258.5 185 67.6
BcaC08g46601 Brassica carinata HOM05D007043 ORTHO05D008951 5.4e-67 258.1 185 67.6
C06p45800 Brassica napus HOM05D007043 ORTHO05D008951 5.4e-67 258.1 185 67.6
SGA_v2.0_scaffold364G49970 Striga asiatica HOM05D007043 ORTHO05D008951 9.1e-67 257.3 188 67.0
TAR625G0569 Trochodendron aralioides HOM05D007043 ORTHO05D008951 9.1e-67 257.3 187 68.4
HPP92_024076 Vanilla planifolia HOM05D007043 ORTHO05D008951 1.2e-66 256.9 181 70.2
AL2G31320 Arabidopsis lyrata HOM05D007043 ORTHO05D008951 2.0e-66 256.1 187 66.8
BraA07t31355Z Brassica rapa HOM05D007043 ORTHO05D008951 5.9e-66 254.6 192 65.6
SHI09106 Sapria himalayana HOM05D007043 ORTHO05D008951 5.9e-66 254.6 182 67.6
EL10Ac8g19385 Beta vulgaris HOM05D007043 ORTHO05D008951 7.7e-66 254.2 189 65.6
Ca_10649_v3 Cicer arietinum L. HOM05D007043 ORTHO05D008951 1.7e-65 253.1 178 69.7
vmacro21134 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 1.7e-65 253.1 218 62.4
vmacro22651 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 1.7e-65 253.1 204 65.7
AT1G71750 Arabidopsis thaliana HOM05D007043 ORTHO05D008951 1.1e-64 250.4 196 62.8
BolC6t39632H Brassica oleracea HOM05D007043 ORTHO05D008951 1.9e-64 249.6 196 63.8
DCAR_016685 Daucus carota HOM05D007043 ORTHO05D008951 2.5e-64 249.2 177 66.1
Lsat_1_v5_gn_9_42421 Lactuca sativa HOM05D007043 ORTHO05D008951 8.3e-60 234.2 184 65.2
MBI04_g42205_MAGBIO Magnolia biondii HOM05D007043 ORTHO05D008951 8.3e-60 234.2 259 52.1
PGR042G2421 Punica granatum HOM05D007043 ORTHO05D008951 8.3e-60 234.2 153 74.5
Dinv41024 Davidia involucrata HOM05D007043 ORTHO05D008951 5.9e-58 228.0 134 79.1
FvH4_2g12860 Fragaria vesca HOM05D007043 ORTHO05D008951 1.3e-57 226.9 161 71.4
SMO011G0020 Selaginella moellendorffii HOM05D007043 ORTHO05D008951 1.2e-55 220.3 184 59.8
Manes.18G095900 Manihot esculenta HOM05D007043 ORTHO05D008951 2.1e-55 219.5 154 72.7
Nitab4.5_0003443g0050 Nicotiana tabacum HOM05D007043 ORTHO05D008951 2.8e-55 219.2 154 70.8
Mapoly0053s0101 Marchantia polymorpha HOM05D007043 ORTHO05D008951 4.7e-55 218.4 181 59.7
Actinidia15616 Actinidia chinensis HOM05D007043 ORTHO05D008951 1.0e-54 217.2 154 70.1
Nn5g28865 Nelumbo nucifera HOM05D007043 ORTHO05D008951 6.8e-54 214.5 150 72.0
Lj7C386G15 Lonicera japonica HOM05D007043 ORTHO05D004353 2.6e-53 212.6 151 70.9
AagrBONN_evm.TU.Sc2ySwM_228.3072 Anthoceros agrestis HOM05D007043 ORTHO05D008951 1.4e-51 206.8 177 57.1
CANSAT25G3234 Cannabis sativa HOM05D007043 ORTHO05D008951 1.8e-51 206.5 152 65.1
Zm00001eb282940 Zea mays HOM05D007043 ORTHO05D008951 1.6e-50 203.4 156 66.0
TPR.G17053 Trifolium pratense HOM05D007043 ORTHO05D008951 1.0e-49 200.7 186 56.5
Sc26g0002900 Simmondsia chinensis HOM05D007043 ORTHO05D008951 2.8e-47 192.6 169 58.6
Pp3c20_5410 Physcomitrium patens HOM05D007043 ORTHO05D008951 8.9e-46 187.6 137 65.7
CBR_g38956 Chara braunii HOM05D007043 ORTHO05D008951 9.2e-43 177.6 189 52.4
Cre08.g358900 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 1.3e-41 173.7 185 51.4
Cre17.g708100 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 2.1e-39 166.4 189 47.6
Actinidia17764 Actinidia chinensis HOM05D007043 ORTHO05D008951 1.7e-33 146.7 131 58.0
MCO13G296 Micromonas commoda HOM05D007043 ORTHO05D008951 6.6e-33 144.8 180 46.1
PRCOL_00003632 Prasinoderma coloniale HOM05D007043 ORTHO05D008951 1.1e-30 137.5 181 42.5
TPR.G793 Trifolium pratense HOM05D007043 ORTHO05D008951 1.5e-29 133.7 78 82.1
SGA_v2.0_scaffold364G49968 Striga asiatica HOM05D007043 ORTHO05D008951 4.6e-26 122.1 181 42.0
Sabra05G0151000 Salix brachista HOM05D000032 ORTHO05D004353 3.5e-18 95.9 56 78.6
Sabra02G0050800 Salix brachista HOM05D006901 ORTHO05D008582 3.1e-06 56.2 53 58.5


User provided reference genes

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